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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1742267..1743526- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008340-T1 ID=KJC3_008340-T1|Name=KJC3_008340-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1260bp|location=Sequence derived from alignment at ch6:1742267..1743526- (Aspergillus niger KJC3)
ATGAGTGCCTGGGCCACTTGCTTGTTAGCCGGCCGGCATGCACGATTATG
TCGCTATCCTAGGGAAAGGAGCGCATATATATACCGATGCATCCCTATAC
AGGGACATGCTGGTCCAGTTTCGCTATCATCTTCTAGGAGATATGGTTAT
ACTGCGACCAACAGCATTCAATCGGCCTACCGAAAATCGAATATTACAAC
CCACAACCGCCATCCCCGTCGGTCAGCCCTTATTATTAGCCACGCACATA
GTACGACAAGCCAGGCCTCAGTGAAATGCTATACGCCACCAAACAAAGGC
CTTATTTCTTTTTTGCCTCCGTCATGGATACCGTACGCTGAGCTGCTACG
CCTCGATAAACCGACAGGTACATACTATCTTTTCTTCCCCTGCGCATACT
CTACTCTACTTGCGGCGTCCATTGCGCCGTCCGTCCCGGTCTGGGAGGTC
GTTGGAACTACCGGGCTTTTCTTTGCTGGTGCGTTGATTATGCGCGGTGC
CGGATGTGCAATCAATGATCTATGGGATAGAAACTTGGATCCGCATGTCG
AACGCACGAAATTCCGCCCGATCGCAAGAGGAGCAATTTCTCCTGGCAAA
GCAGTGCTTTTCACGGGCTCTCAGTTATTAGCAGGACTCGGTATTCTTCT
TCAATTTCCGTATCAATGCCTTTGGTACGGTATACCCAGTCTTCTTTTGG
TGACCACTTATCCTCTTGCTAAGCGCGTTACATATTACCCCCAAGCTGTG
CTGGGCCTTACTTTCTCATGGGGTGCAATTATGGGCTTCCCTGCGCTGGG
CATCGATCTTCTCAATAATGGCGCCGCACTGGAAGCTGCTGCTGCGCTTT
ACGCCAGTTGTGTGACCTGGACGGTTCTGTATGACATGATATACGCGCAT
ATGGACATTAAAGATGACGTTGCGGCTGGCATTAAGTCTATTGCTCTTCG
TCACGAAAAGAACACAAAAGCTGTGCTTTCAGCTCTCGCCGCCGTACAGG
TGCCGTTACTCGCCGCTGCAGGTGTAGCAGCAGGAAGCGGGCCTATCTTC
TTCATCGGCAGTTGTGGCAGTGCGGCTGTCTCCCTCGGTCTCATGATCTG
GAAAGTCCAATTAAAAAATGTACAAAATTGCTGGTGGTGGTTCAAGAACG
GTTGCTTGCTCACCGGTGGAGGTATTACCCTGGGAATGCTCCTTGATTAT
GTCGCGCAAACCACAGGGTTTTATAAACCGGTTGAGGAGCCGGTTTCCCT
TGAGAGCTGA back to topCoding sequence (CDS) from alignment at ch6:1742267..1743526- >KJC3_008340-T1 ID=KJC3_008340-T1|Name=KJC3_008340-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch6:1742267..1743526- (Aspergillus niger KJC3)
ATGAGTGCCTGGGCCACTTGCTTGTTAGCCGGCCGGCATGCACGATTATG
TCGCTATCCTAGGGAAAGGAGCGCATATATATACCGATGCATCCCTATAC
AGGGACATGCTGGTCCAGTTTCGCTATCATCTTCTAGGAGATATGGTTAT
ACTGCGACCAACAGCATTCAATCGGCCTACCGAAAATCGAATATTACAAC
CCACAACCGCCATCCCCGTCGGTCAGCCCTTATTATTAGCCACGCACATA
GTACGACAAGCCAGGCCTCAGTGAAATGCTATACGCCACCAAACAAAGGC
CTTATTTCTTTTTTGCCTCCGTCATGGATACCGTACGCTGAGCTGCTACG
CCTCGATAAACCGACAGGTACATACTATCTTTTCTTCCCCTGCGCATACT
CTACTCTACTTGCGGCGTCCATTGCGCCGTCCGTCCCGGTCTGGGAGGTC
GTTGGAACTACCGGGCTTTTCTTTGCTGGTGCGTTGATTATGCGCGGTGC
CGGATGTGCAATCAATGATCTATGGGATAGAAACTTGGATCCGCATGTCG
AACGCACGAAATTCCGCCCGATCGCAAGAGGAGCAATTTCTCCTGGCAAA
GCAGTGCTTTTCACGGGCTCTCAGTTATTAGCAGGACTCGGTATTCTTCT
TCAATTTCCGTATCAATGCCTTTGGTACGGTATACCCAGTCTTCTTTTGG
TGACCACTTATCCTCTTGCTAAGCGCGTTACATATTACCCCCAAGCTGTG
CTGGGCCTTACTTTCTCATGGGGTGCAATTATGGGCTTCCCTGCGCTGGG
CATCGATCTTCTCAATAATGGCGCCGCACTGGAAGCTGCTGCTGCGCTTT
ACGCCAGTTGTGTGACCTGGACGGTTCTGTATGACATGATATACGCGCAT
ATGGACATTAAAGATGACGTTGCGGCTGGCATTAAGTCTATTGCTCTTCG
TCACGAAAAGAACACAAAAGCTGTGCTTTCAGCTCTCGCCGCCGTACAGG
TGCCGTTACTCGCCGCTGCAGGTGTAGCAGCAGGAAGCGGGCCTATCTTC
TTCATCGGCAGTTGTGGCAGTGCGGCTGTCTCCCTCGGTCTCATGATCTG
GAAAGTCCAATTAAAAAATGTACAAAATTGCTGGTGGTGGTTCAAGAACG
GTTGCTTGCTCACCGGTGGAGGTATTACCCTGGGAATGCTCCTTGATTAT
GTCGCGCAAACCACAGGGTTTTATAAACCGGTTGAGGAGCCGGTTTCCCT
TGAGAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| GO:0004659 | prenyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030470 |
| DBxref | InterPro:IPR000537 |
| DBxref | InterPro:IPR006370 |
| DBxref | PFAM:PF01040 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1742267..1743526 - |
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