You are here

Home

KJC3_008342-T1, KJC3_008342-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008342-T1
Unique NameKJC3_008342-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1747154..1748027-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008342-T1 ID=KJC3_008342-T1|Name=KJC3_008342-T1|organism=Aspergillus niger KJC3|type=mRNA|length=874bp|location=Sequence derived from alignment at ch6:1747154..1748027- (Aspergillus niger KJC3)
AATGGTGAACTAAAACGGCCCGTACCCTTGGCAAACGAGACAAACTCACG
CCCAAGCTAAAGGGACCTTGTGTGCTTTTAGACCTGAGCGACGTCATCAC
CAACTCTCTAGTGCTCTCTACTACCTTCACAGCAGACATACAGTTGCAGC
GATGGCAACGGCAAGGCTTCGCAGAGCGTTTCGCTACCCTGACGATTCAG
GCGATGAAGAGCACAGTCGGGAGGAGCTGGACGAAGAAGGTATGCACTGT
CAGATGCCCAGGCAGGAAGCCATTCTAGACGACGTTGCTGACGGTCCGAC
AGAGCAGGAACGTGTGATAGAGCAGCTGAAAGCACTGGATGAGAAGCGGA
ACTCTGAATATAGTGTAAATATATCTCCTACAGGAAACAATCGAACTAAA
AATGAGAGCATTTGCTGAGTGCCAATCGACGCATTTATATAGATCGTTTT
CGCCGCCATCCCGCTATTTTCCAGCTTCGCTTTTATTGCTTCAATACTGT
CGGGCTCCTCGAGCCTATCTGAACGATGCCTTTCTTTGCTCGGTGCTCTA
TCTCTACTAGTCACAGCTTATATCATGAAGTATCTCCCACTCGAACGCCC
GGATCCTAAGGGCAAGAGACCAATGGCCACACCGCATGCTATGGCGAGCA
TCCGGCCATACATCTTGCCTGTCAATGCTGCGATCTGCGTGCTTCTGGCC
CTGGTCTACGCTTCCCAACCCACAACGCAATCCTGGCTGGAGATCCAGCC
GGTTATCTACTTGGTTCCAGGAGGTAGGTGATCTTCAGCATCCTTGCTTT
GCTTAGCTGCTCTGAGTCTTTGGTGGAAAGATCGGACGACTACTGACACG
ATATAGCAATGTTTGCGGCTGTCC
back to top

Coding sequence (CDS) from alignment at ch6:1747154..1748027-

>KJC3_008342-T1 ID=KJC3_008342-T1|Name=KJC3_008342-T1|organism=Aspergillus niger KJC3|type=CDS|length=1467bp|location=Sequence derived from alignment at ch6:1747154..1748027- (Aspergillus niger KJC3)
ATCGTTTTCGCCGCCATCCCGCTATTTTCCAGCTTCGCTTTTATTGCTTC
AATACTGTCGGGCTCCTCGAGCCTATCTGAACGATGCCTTTCTTTGCTCG
GTGCTCTATCTCTACTAGTCACAGCTTATATCATGAAGTATCTCCCACTC
GAACGCCCGGATCCTAAGGGCAAGAGACCAATGGCCACACCGCATGCTAT
GGCGAGCATCCGGCCATACATCTTGCCTGTCAATGCTGCGATCTGCGTGC
TTCTGGCCCTGGTCTACGCTTCCCAACCCACAACGCAATCCTGGCTGGAG
ATCCAGCCGGTTATCTACTTGGTTCCAGGAGGTAGGTGAAGCAGGAACGT
GTGATAGAGCAGCTGAAAGCACTGGATGAGAAGCGGAACTCTGAATATAG
TATGGCAACGGCAAGGCTTCGCAGAGCGTTTCGCTACCCTGACGATTCAG
GCGATGAAGAGCACAGTCGGGAGGAGCTGGACGAAGAAGATCGTTTTCGC
CGCCATCCCGCTATTTTCCAGCTTCGCTTTTATTGCTTCAATACTGTCGG
GCTCCTCGAGCCTATCTGAACGATGCCTTTCTTTGCTCGGTGCTCTATCT
CTACTAGTCACAGCTTATATCATGAAGTATCTCCCACTCGAACGCCCGGA
TCCTAAGGGCAAGAGACCAATGGCCACACCGCATGCTATGGCGAGCATCC
GGCCATACATCTTGCCTGTCAATGCTGCGATCTGCGTGCTTCTGGCCCTG
GTCTACGCTTCCCAACCCACAACGCAATCCTGGCTGGAGATCCAGCCGGT
TATCTACTTGGTTCCAGGAGGTAGGTGAAGCAGGAACGTGTGATAGAGCA
GCTGAAAGCACTGGATGAGAAGCGGAACTCTGAATATAGTATGGCAACGG
CAAGGCTTCGCAGAGCGTTTCGCTACCCTGACGATTCAGGCGATGAAGAG
CACAGTCGGGAGGAGCTGGACGAAGAAGATCGTTTTCGCCGCCATCCCGC
TATTTTCCAGCTTCGCTTTTATTGCTTCAATACTGTCGGGCTCCTCGAGC
CTATCTGAACGATGCCTTTCTTTGCTCGGTGCTCTATCTCTACTAGTCAC
AGCTTATATCATGAAGTATCTCCCACTCGAACGCCCGGATCCTAAGGGCA
AGAGACCAATGGCCACACCGCATGCTATGGCGAGCATCCGGCCATACATC
TTGCCTGTCAATGCTGCGATCTGCGTGCTTCTGGCCCTGGTCTACGCTTC
CCAACCCACAACGCAATCCTGGCTGGAGATCCAGCCGGTTATCTACTTGG
TTCCAGGAGGTAGGTGAAGCAGGAACGTGTGATAGAGCAGCTGAAAGCAC
TGGATGAGAAGCGGAACTCTGAATATAGTATGGCAACGGCAAGGCTTCGC
AGAGCGTTTCGCTACCCTGACGATTCAGGCGATGAAGAGCACAGTCGGGA
GGAGCTGGACGAAGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008342KJC3_008342Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008342-T1KJC3_008342-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008342-T1.cdsKJC3_008342-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008342-T1.utr3p1KJC3_008342-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008342-T1.exon3KJC3_008342-T1.exon3Aspergillus niger KJC3exon
KJC3_008342-T1.exon2KJC3_008342-T1.exon2Aspergillus niger KJC3exon
KJC3_008342-T1.exon1KJC3_008342-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008342-T1.utr5p1KJC3_008342-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1747154..1748027 -
Powered by Drupal