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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1748112..1748937+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008343-T1 ID=KJC3_008343-T1|Name=KJC3_008343-T1|organism=Aspergillus niger KJC3|type=mRNA|length=826bp|location=Sequence derived from alignment at ch6:1748112..1748937+ (Aspergillus niger KJC3)
GGTCACGCCACACCGCGCAAGACACACGGCACACGTCGAAAGCCAATTGA
TCTTTAATACTTCTCAAAGATGCTCCTACGACTCGCAGAGAGGCGCATCG
GCGCTTCTCGACTATGCGTAAATCATCGCGGAATGCTCCCTCCCCGGCGC
AACTTGATCCCCGCACCACAGGCGAACTCGGGCCCTCTTATGGAAAGACG
GGCGGACAGAGCTCTACCCAATGTTCAAAGCGAGAGGCGATGGCTACGAA
CCTTGCCCATCTTTGCTGTTGTCGTGGGGGCCGCTATGCTGGGTATATTC
AACTACCAGAAATCTTCCTCCAGTGTGGTTAACAGTACGCTGTATGCGCT
GAGGACTTCTCCGCAGGCGAGGGAGGTTCTGGGTGATGAGATTTACTTTG
CTCAGAAGATCCCGTGGATTAGTGGAGAGATGAACCAGCTTCATGGTCGC
ATTGATATTTCATTCTGGGTTAAGGGTACCAAGGCCCAGGGTAAAATGCG
GTTTCGCAGTATTAGACCTGACCGGACTAGCTTTGTTCGTCTACCCCATA
ACCTTTCTTTCTGACCTAAGTCTTTGCTTTTGGTTTTTCAAAGGTTCAAG
AACACCTACTAACGTTCGTTCTATAGTTCCGCACGGAAGTATGGAGCTTG
GAAACCGAGGATGGCACGGTTATCCAGCTACTTGACAAAGATACCGATCC
CTTCAATCAGACCAATTGATTGACTCGACTACTTGGCCCTCTTTGTTCGG
GCTGTATACTTGCTTGTTACGTGGTGTTTGGAGATTTGTGCATGTAAATA
TATCATATCAGTCATGTGCATTGGGC back to topCoding sequence (CDS) from alignment at ch6:1748112..1748937+ >KJC3_008343-T1 ID=KJC3_008343-T1|Name=KJC3_008343-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch6:1748112..1748937+ (Aspergillus niger KJC3)
ATGCTCCTACGACTCGCAGAGAGGCGCATCGGCGCTTCTCGACTATGCGT
AAATCATCGCGGAATGCTCCCTCCCCGGCGCAACTTGATCCCCGCACCAC
AGGCGAACTCGGGCCCTCTTATGGAAAGACGGGCGGACAGAGCTCTACCC
AATGTTCAAAGCGAGAGGCGATGGCTACGAACCTTGCCCATCTTTGCTGT
TGTCGTGGGGGCCGCTATGCTGGGTATATTCAACTACCAGAAATCTTCCT
CCAGTGTGGTTAACAGTACGCTGTATGCGCTGAGGACTTCTCCGCAGGCG
AGGGAGGTTCTGGGTGATGAGATTTACTTTGCTCAGAAGATCCCGTGGAT
TAGTGGAGAGATGAACCAGCTTCATGGTCGCATTGATATTTCATTCTGGG
TTAAGGGTACCAAGGCCCAGGGTAAAATGCGGTTTCGCAGTATTAGACCT
GACCGGACTAGCTTTTTCCGCACGGAAGTATGGAGCTTGGAAACCGAGGA
TGGCACGGTTATCCAGCTACTTGACAAAGATACCGATCCCTTCAATCAGA
CCAATTGAATGCTCCTACGACTCGCAGAGAGGCGCATCGGCGCTTCTCGA
CTATGCGTAAATCATCGCGGAATGCTCCCTCCCCGGCGCAACTTGATCCC
CGCACCACAGGCGAACTCGGGCCCTCTTATGGAAAGACGGGCGGACAGAG
CTCTACCCAATGTTCAAAGCGAGAGGCGATGGCTACGAACCTTGCCCATC
TTTGCTGTTGTCGTGGGGGCCGCTATGCTGGGTATATTCAACTACCAGAA
ATCTTCCTCCAGTGTGGTTAACAGTACGCTGTATGCGCTGAGGACTTCTC
CGCAGGCGAGGGAGGTTCTGGGTGATGAGATTTACTTTGCTCAGAAGATC
CCGTGGATTAGTGGAGAGATGAACCAGCTTCATGGTCGCATTGATATTTC
ATTCTGGGTTAAGGGTACCAAGGCCCAGGGTAAAATGCGGTTTCGCAGTA
TTAGACCTGACCGGACTAGCTTTTTCCGCACGGAAGTATGGAGCTTGGAA
ACCGAGGATGGCACGGTTATCCAGCTACTTGACAAAGATACCGATCCCTT
CAATCAGACCAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008343-T1.utr5p1 | KJC3_008343-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008343-T1.utr3p1 | KJC3_008343-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265LIB |
| DBxref | InterPro:IPR014807 |
| DBxref | PFAM:PF08695 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1748112..1748937 + |
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