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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1832805..1834973- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008370-T1 ID=KJC3_008370-T1|Name=KJC3_008370-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2169bp|location=Sequence derived from alignment at ch6:1832805..1834973- (Aspergillus niger KJC3)
ATGAGTTCCCCTGAAGCCAGCGAGATCAAGGGCAGCGTTGCCCCTGAGTC
CAACATGGAAGTACAAACCGACAAGCCAGCACAGGAGACACCGGCCTCCA
ACCAGCCTAGGAGGGAGCTTTTCATCCGATCGCTTCCCGCCTCTACGACG
ACCGAGAGCCTGACAGAATATTTCTCGCAATCCTACGTTATCAAGCATGC
CGTTGCTGTCACAGACCCTGAGACGAAGCAATCGAAGGGATACGGTTTCG
TGACATTCGCGGATATCGAAGACGCAAAGGCTGCGCTAGAAGAATTTAAT
GGCTCCGTGTTTGAAGGCAAGAAGATCAAGGTTGAATACGCGCAACCGCG
TCATCGTGTTGTTGATGAGAACCTCGGAAAGAGCAAGCCTTCGGCTGAAG
CTCTTGAGCAGAAGAAGAAGAGAGAGGAACAGAGGGCGGCTGCTCAGCCG
CCTAAGCTGATCGTTCGAAACTTGCCGTGGAGCATCAAGGAACCTGATGA
TTTGGCGGTGCTCTTCCGCAGCTTTGGAAAGGTCAAATATGTTACCCTTC
CTAAGAAGGGAAGTCAACTGGCCGGTTTCGGTTTCGTTGTTTTGCGCGGA
AAGAAAAACGCCGAGAAGGCGTTGCAGGCAGTGAACGGAAAGGAGGTGGA
CGGAAGAACATTGGCTGTCGATTGGGCTGTTGAGAAGAACGTCTGGGAGG
ATTTACAAAAGGATCAGGAGGAACAGGAGGAGAATGTAAAGGAGGAGTCA
GAAGACGCTGATATGGAGGATGCTATCGAAGCAGAAGTTGGCATTGATGA
AGAAGCCCAGTCTGACGAGGACGACGACATGGAAGATGGCAGCGACGTTG
ATGAGGATGAAGATGTCGAGGAGGACGAGGACGAGGATGAGGAAGAGGGA
GATAAGGAAGACGAAAGGAACGCTTCGACTATCTTCATCAGAAACCTCCC
CTTCACCTGTGACGATGATATGCTCTACGAACACTTCACCCAGTTCGGTC
CCCTTCGCTATGCCCGAATCGTCGTCGATCACGAAACCGAGCGTCCTCGT
GGTACTGGTTTTGCTTGCTTCTGGAAGCCCGACGATGCAGCAGCCTGCGT
GCGCGACGCCCCCAAACAACAAGATACCTTTGTCGCAGAGAAAGATAAGG
CTAAGAAAGCCTCTACCGCCTACAAGCATTCCATTCTACAGAACGAAAAC
GCCGACCCCACCGGACGGTATACCTTGGAGGGTCGTGTACTACAAGTTGC
CCGCGCAGTGAGCAAATCTCGCGCTTCACAGCTGGAGGAAGAGGGAGTGT
CTCGCCGACTCGTCCGCGATACCGACAAGCGCCGCCTGTACCTTCTTTCC
GAGGGTACCATCCCGCAGAACTCCGCGCTCTACAAGAAGCTTTCGCCATC
GGAGATCAAGATGAGAGAGGACAGCTACAAGCAACGACAGAACTTCATCA
AGAAGAACCCGGCCCTCCATCTCAGTTTGACGCGTTTGTCGATCCGTAAT
ATTCCCCGTCATGTCACCACAAAAGATCTGAAACAGCTCGCTCGTCAAGC
GATCGCCGGATTTGCAGAGGATGCGAAGAAGGGTCTGCGGCAGCCTTTGT
CTAAGGAGGAGTTGAACCGCGCGGCCGACATCATGAGAGAGGCAGAGCAG
TTGCGGAAGAAGAAGGGTGTTGGTGTTGTGAGACAAGCGAAGATCGTCTT
CGAAACCCGTGACGGCCACAAGGTTGGCGAGGACAAGGCTGCGGGAAGAA
GCAGAGGTTACGGTTTCATTGAATACTACACCCACCGCCACGCCCTGATG
GCTCTCAGATGGCTCAATGGCCATGCTGTTGAGGCACCTGCGACTGGTTC
GGAGGACGCCAAGGACAAGAAGAAGCGTTTGATCGTTGAGTTCGCCATTG
AGAACGCCCAGGTCGTCAAGCGCCGACAAGAACAGCAGGCTAAGGCCCGT
ACTTTCAAGAAAGGAAAGCAGGATGGTGAACGTTCTGCGGAGAAGGACGA
AGCAAAGAACAACAAGGGAGGTCCCAATGGAAAGAAGAGGAAGCGCTCTG
ACAACAACGACAAGGGCGCAAATGGAGAGGATGATGAGGAACAGAATAAG
CTTGCAAAGCGGAATCGTATCATCGCAAAGAAGCGCATGCAGCGAAGATC
TCGGAAAGGAAAGGCCTAA back to topCoding sequence (CDS) from alignment at ch6:1832805..1834973- >KJC3_008370-T1 ID=KJC3_008370-T1|Name=KJC3_008370-T1|organism=Aspergillus niger KJC3|type=CDS|length=2169bp|location=Sequence derived from alignment at ch6:1832805..1834973- (Aspergillus niger KJC3)
ATGAGTTCCCCTGAAGCCAGCGAGATCAAGGGCAGCGTTGCCCCTGAGTC
CAACATGGAAGTACAAACCGACAAGCCAGCACAGGAGACACCGGCCTCCA
ACCAGCCTAGGAGGGAGCTTTTCATCCGATCGCTTCCCGCCTCTACGACG
ACCGAGAGCCTGACAGAATATTTCTCGCAATCCTACGTTATCAAGCATGC
CGTTGCTGTCACAGACCCTGAGACGAAGCAATCGAAGGGATACGGTTTCG
TGACATTCGCGGATATCGAAGACGCAAAGGCTGCGCTAGAAGAATTTAAT
GGCTCCGTGTTTGAAGGCAAGAAGATCAAGGTTGAATACGCGCAACCGCG
TCATCGTGTTGTTGATGAGAACCTCGGAAAGAGCAAGCCTTCGGCTGAAG
CTCTTGAGCAGAAGAAGAAGAGAGAGGAACAGAGGGCGGCTGCTCAGCCG
CCTAAGCTGATCGTTCGAAACTTGCCGTGGAGCATCAAGGAACCTGATGA
TTTGGCGGTGCTCTTCCGCAGCTTTGGAAAGGTCAAATATGTTACCCTTC
CTAAGAAGGGAAGTCAACTGGCCGGTTTCGGTTTCGTTGTTTTGCGCGGA
AAGAAAAACGCCGAGAAGGCGTTGCAGGCAGTGAACGGAAAGGAGGTGGA
CGGAAGAACATTGGCTGTCGATTGGGCTGTTGAGAAGAACGTCTGGGAGG
ATTTACAAAAGGATCAGGAGGAACAGGAGGAGAATGTAAAGGAGGAGTCA
GAAGACGCTGATATGGAGGATGCTATCGAAGCAGAAGTTGGCATTGATGA
AGAAGCCCAGTCTGACGAGGACGACGACATGGAAGATGGCAGCGACGTTG
ATGAGGATGAAGATGTCGAGGAGGACGAGGACGAGGATGAGGAAGAGGGA
GATAAGGAAGACGAAAGGAACGCTTCGACTATCTTCATCAGAAACCTCCC
CTTCACCTGTGACGATGATATGCTCTACGAACACTTCACCCAGTTCGGTC
CCCTTCGCTATGCCCGAATCGTCGTCGATCACGAAACCGAGCGTCCTCGT
GGTACTGGTTTTGCTTGCTTCTGGAAGCCCGACGATGCAGCAGCCTGCGT
GCGCGACGCCCCCAAACAACAAGATACCTTTGTCGCAGAGAAAGATAAGG
CTAAGAAAGCCTCTACCGCCTACAAGCATTCCATTCTACAGAACGAAAAC
GCCGACCCCACCGGACGGTATACCTTGGAGGGTCGTGTACTACAAGTTGC
CCGCGCAGTGAGCAAATCTCGCGCTTCACAGCTGGAGGAAGAGGGAGTGT
CTCGCCGACTCGTCCGCGATACCGACAAGCGCCGCCTGTACCTTCTTTCC
GAGGGTACCATCCCGCAGAACTCCGCGCTCTACAAGAAGCTTTCGCCATC
GGAGATCAAGATGAGAGAGGACAGCTACAAGCAACGACAGAACTTCATCA
AGAAGAACCCGGCCCTCCATCTCAGTTTGACGCGTTTGTCGATCCGTAAT
ATTCCCCGTCATGTCACCACAAAAGATCTGAAACAGCTCGCTCGTCAAGC
GATCGCCGGATTTGCAGAGGATGCGAAGAAGGGTCTGCGGCAGCCTTTGT
CTAAGGAGGAGTTGAACCGCGCGGCCGACATCATGAGAGAGGCAGAGCAG
TTGCGGAAGAAGAAGGGTGTTGGTGTTGTGAGACAAGCGAAGATCGTCTT
CGAAACCCGTGACGGCCACAAGGTTGGCGAGGACAAGGCTGCGGGAAGAA
GCAGAGGTTACGGTTTCATTGAATACTACACCCACCGCCACGCCCTGATG
GCTCTCAGATGGCTCAATGGCCATGCTGTTGAGGCACCTGCGACTGGTTC
GGAGGACGCCAAGGACAAGAAGAAGCGTTTGATCGTTGAGTTCGCCATTG
AGAACGCCCAGGTCGTCAAGCGCCGACAAGAACAGCAGGCTAAGGCCCGT
ACTTTCAAGAAAGGAAAGCAGGATGGTGAACGTTCTGCGGAGAAGGACGA
AGCAAAGAACAACAAGGGAGGTCCCAATGGAAAGAAGAGGAAGCGCTCTG
ACAACAACGACAAGGGCGCAAATGGAGAGGATGATGAGGAACAGAATAAG
CTTGCAAAGCGGAATCGTATCATCGCAAAGAAGCGCATGCAGCGAAGATC
TCGGAAAGGAAAGGCCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260XQV |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034809 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1832805..1834973 - |
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