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KJC3_008380-T1, KJC3_008380-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008380-T1
Unique NameKJC3_008380-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1859229..1860012+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008380-T1 ID=KJC3_008380-T1|Name=KJC3_008380-T1|organism=Aspergillus niger KJC3|type=mRNA|length=784bp|location=Sequence derived from alignment at ch6:1859229..1860012+ (Aspergillus niger KJC3)
ATGTTGTCGCTCCTGTGGTCGGTTTTTCTTGTCCACGTTGCCATTTACTT
GGTCAATACCATTGGCGCTAGCACGATTGATAATCTGGTACGTTCTGTCT
GGAAGCTTGCTGAGTGGCGGCCTTGTAGCTGTCATGTCTTAAGCTATTCT
CTCGCACACCAAATGTCAGAGTGTAAGGTAAAGCTAACAAGTATAATCTA
GCTATGGCTTCTCTACCTAAAAGTCCCGACCTCCACGTCGAAGAAATACA
AAGAACAAAACCGACTCAAACGCGAGGTTGTCCAGCTGAAGCGGGACATG
AACAACACCAGCTCACAGGATGAGTTTGCGAAATGGGCGAAACTCCGACG
GAAACATGATAAGACCATGGAGGAATATGAGGCGATAAGTACGTTCGATT
CCAATCGCAGTTACAGTCTATAAATATGGACTGGTTGAAGAGAGAGCTAA
CAAAAGCGGTTCAACAGACAAACAACTCGTTTCGCAGAAAACCTCTTTCG
ACTGGGGCGTCAAAATCGTTCGCTGGTTCGGTACATCTGGTCTCAAGTTC
TTCCTGCAATTCTGGTACTCGAAAACGCCTGTCTTCCATCTGCCAGAGGG
TTGGCTTCCTTACTACGTGGCGTGGCTGCTGTCGTTCCCCCGTGCGCCCA
TGGGGTCGGTGAGCATCCAGATTTGGAGTAATGTTTGTGCGACGGCGATT
ACGACTATGGCGGAGGTGGTGACGGCTGTTCTGTTGCAGAGGGCTACTGC
TGCTGCTGCGCCTGCTGCGAAGAAGACACAATGA
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Coding sequence (CDS) from alignment at ch6:1859229..1860012+

>KJC3_008380-T1 ID=KJC3_008380-T1|Name=KJC3_008380-T1|organism=Aspergillus niger KJC3|type=CDS|length=1773bp|location=Sequence derived from alignment at ch6:1859229..1860012+ (Aspergillus niger KJC3)
ATGTTGTCGCTCCTGTGGTCGGTTTTTCTTGTCCACGTTGCCATTTACTT
GGTCAATACCATTGGCGCTAGCACGATTGATAATCTGCTATGGCTTCTCT
ACCTAAAAGTCCCGACCTCCACGTCGAAGAAATACAAAGAACAAAACCGA
CTCAAACGCGAGGTTGTCCAGCTGAAGCGGGACATGAACAACACCAGCTC
ACAGGATGAGTTTGCGAAATGGGCGAAACTCCGACGGAAACATGATAAGA
CCATGGAGGAATATGAGGCGATAAACAAACAACTCGTTTCGCAGAAAACC
TCTTTCGACTGGGGCGTCAAAATCGTTCGCTGGTTCGGTACATCTGGTCT
CAAGTTCTTCCTGCAATTCTGGTACTCGAAAACGCCTGTCTTCCATCTGC
CAGAGGGTTGGCTTCCTTACTACGTGGCGTGGCTGCTGTCGTTCCCCCGT
GCGCCCATGGGGTCGGTGAGCATCCAGATTTGGAGTAATGTTTGTGCGAC
GGCGATTACGACTATGGCGGAGGTGGTGACGGCTGTTCTGTTGCAGAGGG
CTACTGCTGCTGCTGCGCCTGCTGCGAAGAAGACACAATGAATGTTGTCG
CTCCTGTGGTCGGTTTTTCTTGTCCACGTTGCCATTTACTTGGTCAATAC
CATTGGCGCTAGCACGATTGATAATCTGCTATGGCTTCTCTACCTAAAAG
TCCCGACCTCCACGTCGAAGAAATACAAAGAACAAAACCGACTCAAACGC
GAGGTTGTCCAGCTGAAGCGGGACATGAACAACACCAGCTCACAGGATGA
GTTTGCGAAATGGGCGAAACTCCGACGGAAACATGATAAGACCATGGAGG
AATATGAGGCGATAAACAAACAACTCGTTTCGCAGAAAACCTCTTTCGAC
TGGGGCGTCAAAATCGTTCGCTGGTTCGGTACATCTGGTCTCAAGTTCTT
CCTGCAATTCTGGTACTCGAAAACGCCTGTCTTCCATCTGCCAGAGGGTT
GGCTTCCTTACTACGTGGCGTGGCTGCTGTCGTTCCCCCGTGCGCCCATG
GGGTCGGTGAGCATCCAGATTTGGAGTAATGTTTGTGCGACGGCGATTAC
GACTATGGCGGAGGTGGTGACGGCTGTTCTGTTGCAGAGGGCTACTGCTG
CTGCTGCGCCTGCTGCGAAGAAGACACAATGAATGTTGTCGCTCCTGTGG
TCGGTTTTTCTTGTCCACGTTGCCATTTACTTGGTCAATACCATTGGCGC
TAGCACGATTGATAATCTGCTATGGCTTCTCTACCTAAAAGTCCCGACCT
CCACGTCGAAGAAATACAAAGAACAAAACCGACTCAAACGCGAGGTTGTC
CAGCTGAAGCGGGACATGAACAACACCAGCTCACAGGATGAGTTTGCGAA
ATGGGCGAAACTCCGACGGAAACATGATAAGACCATGGAGGAATATGAGG
CGATAAACAAACAACTCGTTTCGCAGAAAACCTCTTTCGACTGGGGCGTC
AAAATCGTTCGCTGGTTCGGTACATCTGGTCTCAAGTTCTTCCTGCAATT
CTGGTACTCGAAAACGCCTGTCTTCCATCTGCCAGAGGGTTGGCTTCCTT
ACTACGTGGCGTGGCTGCTGTCGTTCCCCCGTGCGCCCATGGGGTCGGTG
AGCATCCAGATTTGGAGTAATGTTTGTGCGACGGCGATTACGACTATGGC
GGAGGTGGTGACGGCTGTTCTGTTGCAGAGGGCTACTGCTGCTGCTGCGC
CTGCTGCGAAGAAGACACAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0043529GET complex
Vocabulary: Biological Process
TermDefinition
GO:0071816tail-anchored membrane protein insertion into ER membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GET1KJC3_008380Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008380-T1.exon1KJC3_008380-T1.exon1Aspergillus niger KJC3exon
KJC3_008380-T1.exon2KJC3_008380-T1.exon2Aspergillus niger KJC3exon
KJC3_008380-T1.exon3KJC3_008380-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008380-T1.cdsKJC3_008380-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008380-T1KJC3_008380-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027538
DBxrefInterPro:IPR028945
DBxrefInterPro:IPR029012
DBxrefPFAM:PF04420
ProductGET complex subunit get1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1859229..1860012 +
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