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KJC3_008382-T1, KJC3_008382-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008382-T1
Unique NameKJC3_008382-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1862930..1867325+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008382-T1 ID=KJC3_008382-T1|Name=KJC3_008382-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4396bp|location=Sequence derived from alignment at ch6:1862930..1867325+ (Aspergillus niger KJC3)
GTCCGTTTGTTTGCACGCACTTACCGGGGTCATGGGGAAATCGGCAAAGG
CGAATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTTGTC
CAGAGCTGGGATGAGGCTGTCGAGGAATACAAAGTATGCGCTTCCTCCCC
GCGCACGTGATCCGTTCGCTGACCCGAACATAACAGCTCTACCACAGCAT
CCATGCGAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTG
CTGAGAAAGCTGAGATGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCC
GACCGCATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAAC
TCCAGCCGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGTGAGTT
ACTCAGTTTGCCGGATGAATCTACTAGGCTGACTTCATTCTAGGCTGCGG
AAGGGCCAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACG
GCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATC
ACAAGGTAAGATGCATTGCCTCCTTTTTACACTCTGGAGAAACTGACTTC
CTTTAGTGCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTAT
GCTGGATACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAA
CAGGAGCTCATAACCCAGCTGAAAGTACAGTAACGAAAGTGGCAGGTATT
TTTTCTGCGTTTACCGCTATCCTGGTAGGTTGCATTGGAGTATGTGCGCA
GAAAGCTGAATCCCCAGGACGGCCACAGGCGCAAACAACATCCCGTCTGG
GTACAGGCCAGGATTAGATTAGAATCTCCCTCCAGGCGGCTGCAGATGGG
CATGCGCCTTGTTGGTGAGATACTACCTGAATAGGTGGCTTGTCATTTGG
CCACGATCACCGGTTGTGACCTTAGAAACCCACATGAAGACTGTGAAACA
GCACTGCGTATATCGAATGAAGCGCAGCGACCCCATTGGCGGCCTCACCC
TAATCCCTATGACTTCGTTTGGTCTGATTCTGAATATCATTCTCATGTCT
ATCTGCCTCCTCTTGCTTAGAAATGCGCTTTGGGGTTTTATATATCCTCA
GTCCTTCCGTCCATTCTGAATTCCCTTTTATCTTCCAAGATTCCCTTATA
TATATACCATCAATCTCATACTGCCAGTTGCAGCTGTCATTCAAATTTCT
CGTCTTGTCTAGTGCATACCCAGAAAAACAAAAGGAAAGCTGGCAGTCTA
CAAGTTTTTCGTTCTCTAAAACAACCTTCACCATTTGGACTCCTTACATA
CTATGGTGTACCCATTCCAGGAGGAGCTGGAGCACCAGTCTTCTGAAGTG
AACCGTGGGCTCCGTGAAGGCTCACATGCTCAGCTGATTATCCATGGAGA
GGATTCTTGCAATACCGTGGTGATTGCTGTCGCCCGGTGAAGCCTTATGT
CTTGCACGTTGCTGGAAGCATGTATATAACCTTCAAAAGAGGTGAGATTG
AAACATGATGACTTTTAGATACAAGGCTCATTGACTGTTCGTATAGACTC
CATCAATGTCTGAATGGGTCGAGGACTGTGCTCCAATGCTCTGTCAGGAA
CGTGGAGGATGAGGCCATGTAACTAGATGCATGTCCCATCCTCAGAGGCT
ATCGCGTATATATACACCATGATTCCCAATATCGATATGTTTCAGAACCA
CCATTTCCCATCGTTCAGAAATCATCAATTTCGAGAACCCAAATTATTTA
TTAAAATCTCTGGACCTTCCTGCTCAGTAAGTCATGGCTTCTCTCTCCCT
CTCATCAGATTACGCGATTAACAAGGATCTGCAGGTCAAGATACGAATCT
CAGAGCAACCAACCCTGCTGTCAGCTTTCGCCAACTAGCTGTGACAATCG
AGCGATCCTGATCAGTTGTTGCCCTGCGCGGTGGCGATTCTCATACAACC
TGGTTGTCCTCAGTGACCCGCAGAATCCCAATGAGGGAAATTACCTGCAC
TTTAATCACGAATGGAATTTAGATTTAGGCTTTCGAGCATCTTGCATTTC
CTCTTTTCCGTGGATGATTCCTGTTAGGCCTGGGAACCATGGCGGCCTGC
GCTACGTATTGACTGAGAGCGAATGAAGAACAGGCCCAGAGAAGCCTTAC
GAGAGCTTTCTCAGGGCAGATGGGAATCGAATTTGGGACCACAAAATGTC
GTCTTGCCGCCAACACTTCAATTTCTGCTGCAAATACACCATCGAACCGG
CCTCTCTCGCTGAACACAATTAGACAAATTCTTTCCCAGGTCATCAGCGT
ATGGAGATGGAAGCACTGAATCTCTCGGAACTGTCGATCTTCATCAAATT
CATGTCCCTGAAGCAACCTATTGCCTCAGTCGTGTCACTGGAAATGACTG
ATGGACCTGACCTATCGGCCTATGTGTACATTCAACAACTTCGCAACATC
TGTCTTGACCATTTTATCTGACATTCTGGGGCAACGATAAGAGCAATGGA
GAAACATGCTTGTCCATTACCCGATGTTATCCTGGCTGAAAACTGTCTTC
TGTGGTGTCATTCTAAGAAGTTCATTCCGAGAATACCATGTTGCCGTTGA
TGTACCATTCTTATACGCCGCATCACAATGATACGACATGCTGCAGCCCG
CATCTATACTTTCACTTCCGACTTCGCATTTCATTGACGCAGTGAGTGAA
CTTCCCGAGCCTCGACGCATCGCCAATAGCTCCAGTCATGTCAATTTTGA
CTTCACCGAGCCAAATCATCAGATATCGCAACTGAAGCACGAAGAGTTTT
TGAACTTAGACATCAACATTACCGCTCGGTATCTGCTTGCTGGTCTATGG
TCCAGCCGCTTCCATTGATTCTGGTCATGTCTGTCCAACAGTCCTATAAT
GCCATCAAAGTTTGCCTACGGCACAATTCTCCTCGTTTCAGGAATATATT
ATGTTGTCGCAGACCGCATTTTGCTCCTGCGATTCCGGCCTTAATGCCAT
GATTCCAATGACTACAAGTTCCGAGGCCCTTTGTGTACGAATCATTAGAA
CGAACATCCGAAAGTCCCACGAACCTAAGGGCTTCGCTACGCGCCGGAAA
GTCGTGCTGCGTGTACATGTCTCTTCCAGCTTCTATAAAGCGGATAAACT
GTCATCTCGATGGTTGGTCTCATACAGAGTCATCGACAAAGCGCTTAGTG
GCCATTCATTTCGAAATATTTACCGAACTCGATCTGAAGATAACCTCAGG
TGTTGCCGTATCCGCAGCCACGGAGATTCTCGAAGCCATCCTCCTCCAAT
CGTTCGGAAGAAAGATTAACAGTTCATTACAGAACTTATAATGCCCGGGT
CTCGGTAAGAGCCGTGAGCACACGAAAACCGGATTACTCGTACTCGGTCT
TCCTGACTGCTCCCGAGCCTACGATATCACATCAACCATGACGGATGTAT
TTCTGACAAATGAAATAAGACTACGTGCGCTGCGGCCCGAGAATACTGAG
ATAGCTCTCGGGATTAAGAGACTCATCTTGCGATCCACTCTACTAAAGCT
GTAAAGGCCTCGCATCGCACAGCACATGCAAGGAAAAATCCAAATCCTGC
GCCTGCGAAGGCGTTCCAGACCAATTAAGCTGTTATATCAGAGCCCAGAA
ACAACCCCTCCATCACCTTTCTGGCATGTCGCTATTTTGGCCTTGCCCTG
GATTATCTGTTAACCTGGGTGAGCAAATGAAGGACTTCAGCGGAAACATG
CTTCAGTATACTTTACCCTGGTTATCTATCAGCCGAACATCGTGGACATC
GCATGTTATAAAGATGCAGTGGACTTCGGAAGATTTGAGGGTTGCTTATA
ATCTGGAAGGTCATAACCTTGGGAGTGCTGTATCAGACCGGCCTGGTGCT
GGAGGATGTGGTAGGTACTGTACTCTTATGGAACGAAAAGCGTTCTCGTC
TTGATTTGACTAACATAGGTGCAGGCCACATATATATCAGACATTACCTA
GCGAGCCAGTATTTCAAATAAAACTTCTGGTCTACCGGCAGTGGTGAGAC
CGAACCGAAATCTCACTCCAGCCAAACGCCTTATCCGGACATGCCACCGA
CGGCGAGACCACCAGCCAAATGAAGTATGCCGGCTATTGATTTCGCTTTT
TATAAGCTTGTCACTATAGCCGCCGATATGACAGGAATACCTGTTAGTAG
AAATACTCTATCCTCCGAAGGCTCAGATCCAACCCCCGACGCAATCATCA
TTATGACATCCATAGACGATAACTATCCACGAGTGCAGTAAAACAGTCGT
GTCCTATGCTCTGCTCTTCAACCCACCGTCGCCAGTCAACTCATTG
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Coding sequence (CDS) from alignment at ch6:1862930..1867325+

>KJC3_008382-T1 ID=KJC3_008382-T1|Name=KJC3_008382-T1|organism=Aspergillus niger KJC3|type=CDS|length=2112bp|location=Sequence derived from alignment at ch6:1862930..1867325+ (Aspergillus niger KJC3)
ATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGAGATCTG
GGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGGAATACA
AACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGATGTCCTG
AGGGAAGCAGAGGCTGCTGAGAAAGCTGAGATGGAGCAAGATGAGCAGCC
GTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCGACACTA
CTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAGGCCAAA
ATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGGTGCCCA
GGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGC
CTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAACCTCATG
ATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGGCCAACA
GCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAAAGGCGA
ATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTTGTCCAG
AGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCATCCATGC
GAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTGCTGAGA
AAGCTGAGATGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCCGACCGC
ATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAACTCCAGC
CGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGGAAGGGC
CAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACGGCCGGG
CCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATCACAAGT
GCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATGCTGGAT
ACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAACAGGAGC
TCATAAATGGGGAAATCGGCAAAGGCGAATAAACCCCTCACCCAGGAAGA
GATCTGGGATGATTCTGCCCTTGTCCAGAGCTGGGATGAGGCTGTCGAGG
AATACAAACTCTACCACAGCATCCATGCGAAGGGGGAGAATGTTGAAGAT
GTCCTGAGGGAAGCAGAGGCTGCTGAGAAAGCTGAGATGGAGCAAGATGA
GCAGCCGTTGGACGAGTCGGCCGACCGCATGGATGCCGATGTCGACGCCG
ACACTACTGCCAATGCAACAACTCCAGCCGAACCTCAACAGGTGTCACAG
GCCAAAATGTCGCAGGCTGCGGAAGGGCCAGAACAACCCTTTGTACAGGG
TGCCCAGGTCACGGAGCAAACGGCCGGGCCCAGTCCCGTAGGAGCGCCTC
CTATGCCTCATGCCACCCTATCACAAGTGCAAGACGAAGGACTCAAAAAC
CTCATGATGGCTTGGTACTATGCTGGATACTACACTGGTCTATATGAGGG
CCAACAGCGAGCAAACCAGAACAGGAGCTCATAAATGGGGAAATCGGCAA
AGGCGAATAAACCCCTCACCCAGGAAGAGATCTGGGATGATTCTGCCCTT
GTCCAGAGCTGGGATGAGGCTGTCGAGGAATACAAACTCTACCACAGCAT
CCATGCGAAGGGGGAGAATGTTGAAGATGTCCTGAGGGAAGCAGAGGCTG
CTGAGAAAGCTGAGATGGAGCAAGATGAGCAGCCGTTGGACGAGTCGGCC
GACCGCATGGATGCCGATGTCGACGCCGACACTACTGCCAATGCAACAAC
TCCAGCCGAACCTCAACAGGTGTCACAGGCCAAAATGTCGCAGGCTGCGG
AAGGGCCAGAACAACCCTTTGTACAGGGTGCCCAGGTCACGGAGCAAACG
GCCGGGCCCAGTCCCGTAGGAGCGCCTCCTATGCCTCATGCCACCCTATC
ACAAGTGCAAGACGAAGGACTCAAAAACCTCATGATGGCTTGGTACTATG
CTGGATACTACACTGGTCTATATGAGGGCCAACAGCGAGCAAACCAGAAC
AGGAGCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008382KJC3_008382Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008382-T1KJC3_008382-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008382-T1.utr5p1KJC3_008382-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008382-T1.exon1KJC3_008382-T1.exon1Aspergillus niger KJC3exon
KJC3_008382-T1.exon2KJC3_008382-T1.exon2Aspergillus niger KJC3exon
KJC3_008382-T1.exon3KJC3_008382-T1.exon3Aspergillus niger KJC3exon
KJC3_008382-T1.exon4KJC3_008382-T1.exon4Aspergillus niger KJC3exon
KJC3_008382-T1.exon5KJC3_008382-T1.exon5Aspergillus niger KJC3exon
KJC3_008382-T1.exon6KJC3_008382-T1.exon6Aspergillus niger KJC3exon
KJC3_008382-T1.exon7KJC3_008382-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008382-T1.cdsKJC3_008382-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008382-T1.utr3p1KJC3_008382-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_008382-T1.utr3p2KJC3_008382-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_008382-T1.utr3p3KJC3_008382-T1.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_008382-T1.utr3p4KJC3_008382-T1.utr3p4Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010304
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1862930..1867325 +
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