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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1886575..1888522- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008389-T1 ID=KJC3_008389-T1|Name=KJC3_008389-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1948bp|location=Sequence derived from alignment at ch6:1886575..1888522- (Aspergillus niger KJC3)
CTGGAAACCAGACATAATCACAATGTCCTCCCTACTACCATAGAGTGTAT
GGTAGCGAGAGAGAGAGAAAGAGAGAGACAAGGAATGGACCATAAGATCG
ACACCCTCGCCACCCTCCACAACTGGACCCAAGGCACCCCATCCCTCTAC
CCTTTCACGGGCATCATTCAACTCTGTCTAGCGGAGGAGATCTCCGTTGC
CACGGCAGTAGAAGAAATAAGTGCATTTATTAACGGAAAGGGAGAAGGAA
TAGGTATACTCCTCTCATATCATATCATATCATATCATATACCATGATGC
TAATAAAATACATACAGATGAATGCGTCCACGACCTATGGGCAAGTATTC
TACACACGGGGAGATGTTTACCCTCCACAAACATCATCTCAGCTAATGCT
GATCCCACCATCCCCAACGGTAATGGCAGCAACGCAAAGAAAGAAACCAT
CGACACCGACATCTCAACCCACCAAACACCCACCCCGCCACAAAAGAAAC
TAATCGCCTTGATGCACGCGATCAAAAATATGCCCGATGTGCATGTGCAT
ATCCGTACGCGTGCGCAGTCAAGGTACTCTTATTCTTCTTCTTCGCAGAT
GTATTCTGCAAGTAGGGATAGATATTCTTTCTACAGTAATACCAATGAAA
ATATTACTGAGAAGAATGAGAATGAACCTACAAATGAAGAGAACAATAAT
GGAAAGGAAGATGAAGGAGAATCCACCGAAGAAGAAGAACTCTACCACCC
GTCTTTGGGTGTATATCTCGATGGGACGGTGGGTGGATCGCCTTATCTTC
GCCATTTACATGATTCGGTGTCTACACCCGCTCCTTCTACACCAGCTCCT
CCCTTACCTACTCCTGTCTCATCAGAACCAAAGAAGAACACCAACGAACC
CCATCCCCAACCTCACGAAAAGAATCGACCCAAACCACCCAAACTCCCCT
CCTCAGCATCTGACACTACCATCCGGCCTACGAAAACCAAGTCTCTAGTA
TGGGCCTATCTACCGCAATTCAAAGACGTGGTGGAGTCTATATTCCATGA
TTTTGGGAAAACACTCGGTACCGACATTACTCCTTTCCCACATATACAAC
CTTATCATCAACCTCCTCATCAACCTCCTCAAAAAATACATCCAAAGGAT
CAACAGGTCCTCTACCAAGCATGGATCAACTTCATCACCTTCCTCGCATT
CCTCGCCAGGGAAGGAGTATTACGGTCTCCTGACGATCTCAATTCAGGGT
ATGAGTATGGGTTCGATGAGTTTGATTGGGGATTCAATGATAATAATAAT
ATTATTAATAATGATTTTGGGGATGGAGTCGGGTCATGGATCGATGATCT
GGCGATTTCTTGTCTTCGGGTACTTAACAACAACAACAACAACAATCCCC
ACCATCAGAATCATCACGATAACAATAAGGAACAAATCCATCTGCAAAGA
AATACCCAAATCCTCACAGCAACGACCCTCGCCCTCCTCTACGGCGAACA
TCTCTGGCGGAGACGGGGCGATCGATCCCATCCCTCACCTCCTACCCATC
AACAACAACAACAAGAGAAAATACAAGAAAAAGAAAAGAAAGAAGAAGAG
AAGGAAAACTACATCGTAGCAGGTCTGACTCTCGACGAATTCGAATCAGG
GTCTGTATCAGCATCTACATCCACCTCTGCAGCTAATTCTCCGCCTTTGG
CTCCATCACCACAGCCACAGAATACTGAGGATGTGAGTGAGGAGGGTAGG
GGGAGGTTTATTACGAGGAAGATGTGGGAATCGTGGATTCGGAGGTTCAA
TGAACTTGCGGGGGATTTGGGGATGGAGATGGGGTTGTGGGATGAGACGA
GGGAGGGGGCGTGGTTGGCGGGGGAGGAGTTGAGGAGGGTTTGTTCTGTT
CATCATCATCATCATCATCATAGTGGTCATGGGAATGATAAGTAGTGA back to topCoding sequence (CDS) from alignment at ch6:1886575..1888522- >KJC3_008389-T1 ID=KJC3_008389-T1|Name=KJC3_008389-T1|organism=Aspergillus niger KJC3|type=CDS|length=5337bp|location=Sequence derived from alignment at ch6:1886575..1888522- (Aspergillus niger KJC3)
TGAATGAATGCGTCCACGACCTATGGGCAAGTATTCTACACACGGGGAGA
TGTTTACCCTCCACAAACATCATCTCAGCTAATGCTGATCCCACCATCCC
CAACGGTAATGGCAGCAACGCAAAGAAAGAAACCATCGACACCGACATCT
CAACCCACCAAACACCCACCCCGCCACAAAAGAAACTAATCGCCTTGATG
CACGCGATCAAAAATATGCCCGATGTGCATGTGCATATCCGTACGCGTGC
GCAGTCAAGGTACTCTTATTCTTCTTCTTCGCAGATGTATTCTGCAAGTA
GGGATAGATATTCTTTCTACAGTAATACCAATGAAAATATTACTGAGAAG
AATGAGAATGAACCTACAAATGAAGAGAACAATAATGGAAAGGAAGATGA
AGGAGAATCCACCGAAGAAGAAGAACTCTACCACCCGTCTTTGGGTGTAT
ATCTCGATGGGACGGTGGGTGGATCGCCTTATCTTCGCCATTTACATGAT
TCGGTGTCTACACCCGCTCCTTCTACACCAGCTCCTCCCTTACCTACTCC
TGTCTCATCAGAACCAAAGAAGAACACCAACGAACCCCATCCCCAACCTC
ACGAAAAGAATCGACCCAAACCACCCAAACTCCCCTCCTCAGCATCTGAC
ACTACCATCCGGCCTACGAAAACCAAGTCTCTAGTATGGGCCTATCTACC
GCAATTCAAAGACGTGGTGGAGTCTATATTCCATGATTTTGGGAAAACAC
TCGGTACCGACATTACTCCTTTCCCACATATACAACCTTATCATCAACCT
CCTCATCAACCTCCTCAAAAAATACATCCAAAGGATCAACAGGTCCTCTA
CCAAGCATGGATCAACTTCATCACCTTCCTCGCATTCCTCGCCAGGGAAG
GAGTATTACGGTCTCCTGACGATCTCAATTCAGGGTATGAGTATGGGTTC
GATGAGTTTGATTGGGGATTCAATGATAATAATAATATTATTAATAATGA
TTTTGGGGATGGAGTCGGGTCATGGATCGATGATCTGGCGATTTCTTGTC
TTCGGGTACTTAACAACAACAACAACAACAATCCCCACCATCAGAATCAT
CACGATAACAATAAGGAACAAATCCATCTGCAAAGAAATACCCAAATCCT
CACAGCAACGACCCTCGCCCTCCTCTACGGCGAACATCTCTGGCGGAGAC
GGGGCGATCGATCCCATCCCTCACCTCCTACCCATCAACAACAACAACAA
GAGAAAATACAAGAAAAAGAAAAGAAAGAAGAAGAGAAGGAAAACTACAT
CGTAGCAGGTCTGACTCTCGACGAATTCGAATCAGGGTCTGTATCAGCAT
CTACATCCACCTCTGCAGCTAATTCTCCGCCTTTGGCTCCATCACCACAG
CCACAGAATACTGAGGATGTGAGTGAGGAGGGTAGGGGGAGGTTTATTAC
GAGGAAGATGTGGGAATCGTGGATTCGGAGGTTCAATGAACTTGCGGGGG
ATTTGGGGATGGAGATGGGGTTGTGGGATGAGACGAGGGAGGGGGCGTGG
TTGGCGGGGGAGGAGTTGAGGAGGATGGTAGCGAGAGAGAGAGAAAGAGA
GAGACAAGGAATGGACCATAAGATCGACACCCTCGCCACCCTCCACAACT
GGACCCAAGGCACCCCATCCCTCTACCCTTTCACGGGCATCATTCAACTC
TGTCTAGCGGAGGAGATCTCCGTTGCCACGGCAGTAGAAGAAATAAGTGC
ATTTATTAACGGAAAGGGAGAAGGAATAGTGAATGAATGCGTCCACGACC
TATGGGCAAGTATTCTACACACGGGGAGATGTTTACCCTCCACAAACATC
ATCTCAGCTAATGCTGATCCCACCATCCCCAACGGTAATGGCAGCAACGC
AAAGAAAGAAACCATCGACACCGACATCTCAACCCACCAAACACCCACCC
CGCCACAAAAGAAACTAATCGCCTTGATGCACGCGATCAAAAATATGCCC
GATGTGCATGTGCATATCCGTACGCGTGCGCAGTCAAGGTACTCTTATTC
TTCTTCTTCGCAGATGTATTCTGCAAGTAGGGATAGATATTCTTTCTACA
GTAATACCAATGAAAATATTACTGAGAAGAATGAGAATGAACCTACAAAT
GAAGAGAACAATAATGGAAAGGAAGATGAAGGAGAATCCACCGAAGAAGA
AGAACTCTACCACCCGTCTTTGGGTGTATATCTCGATGGGACGGTGGGTG
GATCGCCTTATCTTCGCCATTTACATGATTCGGTGTCTACACCCGCTCCT
TCTACACCAGCTCCTCCCTTACCTACTCCTGTCTCATCAGAACCAAAGAA
GAACACCAACGAACCCCATCCCCAACCTCACGAAAAGAATCGACCCAAAC
CACCCAAACTCCCCTCCTCAGCATCTGACACTACCATCCGGCCTACGAAA
ACCAAGTCTCTAGTATGGGCCTATCTACCGCAATTCAAAGACGTGGTGGA
GTCTATATTCCATGATTTTGGGAAAACACTCGGTACCGACATTACTCCTT
TCCCACATATACAACCTTATCATCAACCTCCTCATCAACCTCCTCAAAAA
ATACATCCAAAGGATCAACAGGTCCTCTACCAAGCATGGATCAACTTCAT
CACCTTCCTCGCATTCCTCGCCAGGGAAGGAGTATTACGGTCTCCTGACG
ATCTCAATTCAGGGTATGAGTATGGGTTCGATGAGTTTGATTGGGGATTC
AATGATAATAATAATATTATTAATAATGATTTTGGGGATGGAGTCGGGTC
ATGGATCGATGATCTGGCGATTTCTTGTCTTCGGGTACTTAACAACAACA
ACAACAACAATCCCCACCATCAGAATCATCACGATAACAATAAGGAACAA
ATCCATCTGCAAAGAAATACCCAAATCCTCACAGCAACGACCCTCGCCCT
CCTCTACGGCGAACATCTCTGGCGGAGACGGGGCGATCGATCCCATCCCT
CACCTCCTACCCATCAACAACAACAACAAGAGAAAATACAAGAAAAAGAA
AAGAAAGAAGAAGAGAAGGAAAACTACATCGTAGCAGGTCTGACTCTCGA
CGAATTCGAATCAGGGTCTGTATCAGCATCTACATCCACCTCTGCAGCTA
ATTCTCCGCCTTTGGCTCCATCACCACAGCCACAGAATACTGAGGATGTG
AGTGAGGAGGGTAGGGGGAGGTTTATTACGAGGAAGATGTGGGAATCGTG
GATTCGGAGGTTCAATGAACTTGCGGGGGATTTGGGGATGGAGATGGGGT
TGTGGGATGAGACGAGGGAGGGGGCGTGGTTGGCGGGGGAGGAGTTGAGG
AGGATGGTAGCGAGAGAGAGAGAAAGAGAGAGACAAGGAATGGACCATAA
GATCGACACCCTCGCCACCCTCCACAACTGGACCCAAGGCACCCCATCCC
TCTACCCTTTCACGGGCATCATTCAACTCTGTCTAGCGGAGGAGATCTCC
GTTGCCACGGCAGTAGAAGAAATAAGTGCATTTATTAACGGAAAGGGAGA
AGGAATAGTGAATGAATGCGTCCACGACCTATGGGCAAGTATTCTACACA
CGGGGAGATGTTTACCCTCCACAAACATCATCTCAGCTAATGCTGATCCC
ACCATCCCCAACGGTAATGGCAGCAACGCAAAGAAAGAAACCATCGACAC
CGACATCTCAACCCACCAAACACCCACCCCGCCACAAAAGAAACTAATCG
CCTTGATGCACGCGATCAAAAATATGCCCGATGTGCATGTGCATATCCGT
ACGCGTGCGCAGTCAAGGTACTCTTATTCTTCTTCTTCGCAGATGTATTC
TGCAAGTAGGGATAGATATTCTTTCTACAGTAATACCAATGAAAATATTA
CTGAGAAGAATGAGAATGAACCTACAAATGAAGAGAACAATAATGGAAAG
GAAGATGAAGGAGAATCCACCGAAGAAGAAGAACTCTACCACCCGTCTTT
GGGTGTATATCTCGATGGGACGGTGGGTGGATCGCCTTATCTTCGCCATT
TACATGATTCGGTGTCTACACCCGCTCCTTCTACACCAGCTCCTCCCTTA
CCTACTCCTGTCTCATCAGAACCAAAGAAGAACACCAACGAACCCCATCC
CCAACCTCACGAAAAGAATCGACCCAAACCACCCAAACTCCCCTCCTCAG
CATCTGACACTACCATCCGGCCTACGAAAACCAAGTCTCTAGTATGGGCC
TATCTACCGCAATTCAAAGACGTGGTGGAGTCTATATTCCATGATTTTGG
GAAAACACTCGGTACCGACATTACTCCTTTCCCACATATACAACCTTATC
ATCAACCTCCTCATCAACCTCCTCAAAAAATACATCCAAAGGATCAACAG
GTCCTCTACCAAGCATGGATCAACTTCATCACCTTCCTCGCATTCCTCGC
CAGGGAAGGAGTATTACGGTCTCCTGACGATCTCAATTCAGGGTATGAGT
ATGGGTTCGATGAGTTTGATTGGGGATTCAATGATAATAATAATATTATT
AATAATGATTTTGGGGATGGAGTCGGGTCATGGATCGATGATCTGGCGAT
TTCTTGTCTTCGGGTACTTAACAACAACAACAACAACAATCCCCACCATC
AGAATCATCACGATAACAATAAGGAACAAATCCATCTGCAAAGAAATACC
CAAATCCTCACAGCAACGACCCTCGCCCTCCTCTACGGCGAACATCTCTG
GCGGAGACGGGGCGATCGATCCCATCCCTCACCTCCTACCCATCAACAAC
AACAACAAGAGAAAATACAAGAAAAAGAAAAGAAAGAAGAAGAGAAGGAA
AACTACATCGTAGCAGGTCTGACTCTCGACGAATTCGAATCAGGGTCTGT
ATCAGCATCTACATCCACCTCTGCAGCTAATTCTCCGCCTTTGGCTCCAT
CACCACAGCCACAGAATACTGAGGATGTGAGTGAGGAGGGTAGGGGGAGG
TTTATTACGAGGAAGATGTGGGAATCGTGGATTCGGAGGTTCAATGAACT
TGCGGGGGATTTGGGGATGGAGATGGGGTTGTGGGATGAGACGAGGGAGG
GGGCGTGGTTGGCGGGGGAGGAGTTGAGGAGGATGGTAGCGAGAGAGAGA
GAAAGAGAGAGACAAGGAATGGACCATAAGATCGACACCCTCGCCACCCT
CCACAACTGGACCCAAGGCACCCCATCCCTCTACCCTTTCACGGGCATCA
TTCAACTCTGTCTAGCGGAGGAGATCTCCGTTGCCACGGCAGTAGAAGAA
ATAAGTGCATTTATTAACGGAAAGGGAGAAGGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008389-T1.utr5p1 | KJC3_008389-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022085 |
| DBxref | PFAM:PF12311 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1886575..1888522 - |
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