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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1892070..1894163- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008391-T1 ID=KJC3_008391-T1|Name=KJC3_008391-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2094bp|location=Sequence derived from alignment at ch6:1892070..1894163- (Aspergillus niger KJC3)
ATGATGCAGACAGCCCTTCATCAGCCCATGGGGATGACACTCTTGGCTGA
TGCCGCTACTTCGTCCCTCACGGCTCTCAAAGGCTCTACCACATCTTCTG
CTTTAACTTCGTTAACCGTGCCTCCGGAGCCTGCACGGACGGTCGTCACA
GTCTACACTCCGGGGCAGGAGGCCATCGTTCAAGTGGTCGCGGATATCCT
CGGCAAGCCATGGACCACCGAAACCTCGCTGTCTACGTTTGGCCGGGGCA
GCAATGCTGTCGTCGTGGGGTTTCTCGCCACGGAAGATTCCATCCCAAGC
TTACAAGTGGATGACCAGACGGCCTGTGTTCTGGTCAACACGCATTGTGT
CGACGATGGATCGTTTCCGGATGACGCACTCACCGAGCGCTGCCATTATG
AGTTCCTGTACTCTTTGCGCAGTCCTTTCTTTCGCCGCGACCTGACGCGC
TTCTTGTCGCTGATCCTGGGCCAGACTCGGCCGCATGAGGACCTGAAGAC
CAAGAACCGGACCAACTTCATCTCCACGACGTTTCCGGATGTGCATGCGG
CCCTGCCAAACCTCGACATTCTCTCTGTGGGGTCGGATGCTGTTGAAATC
CGCGTGGATCTGCTGGTCGATCCTGAACCACCCCAGGGGGCTGAGACATC
CGTGCCGAGCCTTCGCTACGTAGGGCAGCAATTGATGTTGCTTCGGCAGC
ATACGGAGTTGCCCATTATTTTCACCACCCGGTGCACCAAGGAGAACGGC
AAGTTTCCGATGGATGACCCGATGCTTTTCTACAAATATCTCCGGCGGGC
GATTCAGTGGGGAGTGGAGTACATTGATGTGGAGCTGTGGTTGCCCGAAG
ACATCCGGAGACGGCTGTCAGAGGTCAAAGGAAATAGCATCATCATGTCT
GCGTTCCACGACTTCTCGGGGGCGTGGAAGTGGACGTCGCCAGAGGCACC
CCGGATCTTTGCGGAAAGCGCCAAGTACGCGGACATTGTCAAGATGATCG
CCATGGTGACTACGATCGAGGCCAACTACGAACTGGAGTACTTCCGATCG
ACGATCAAGGGGACCTACGGGCCCTACCCACTCCTCTCAGCGGTCAACAT
GGGTCAACTGGGGCAGCTTTCGCGTGCGCTCAACACGGTGTTTTCGCCCA
TCACGCATCCGCTACTGCCGATGATTGCCGCGCCCGGCCAGCTGACCGCC
GCCGAGATCAACGAGGCCCTCCACATCATGGGACAGCTTCCCAAGCGGGA
TTTGTACGCCATTGGATCCTTCCGATCCACGCCGCAATCGATGTTCATGG
AGAAATGCTTCAATGAGCTCAGTCTGCCGCACACGCTGACCTCGATCGAC
CGGGGTCCCTCGGGCTCGATCGAGCGGGTGATCACGCAGCCGAGCTTTGG
GGGAGCCTCCGTTCACCCGCCAATCACCAGTGGCACGAGCAGTATCCCAG
CCATCAGCGAAGCAGCGCAAGCGATCGGGCTGGTGGATACTATCGTGGCG
ATGCGGGGCTCTGGGCGGCCACAGCAGGCACCATCGCCGCAACAGCAGTT
GATGGGGGAGAATGCGACGTGGAAGGGAATTCGGGCGACGTTGACACGGG
ACTATGTGCCGTCGGCGTACCGGGGACGAGCAGCCATCATCTTAGCGGGG
AGCGAGAGCGAAGCATCGGCGACGATCTTTGCGTTGCGCAGTCTGGGAGT
GGGCGCGATCCACACGGTCGGGTTTCGGGCGCGCGGCCCGCTGGCGGAGG
GACTGGAGCCGTTTACGTCGATCCAATCGGTGAAGATGGTGGAGCAGCCG
TTTGTGATGGTGTCGGCGCTGCCCCCAGAGAAGTCACTGCTGGTGCAGCC
GTTGCTGCGGCACTACCGGACGAGTGGACGCACGTCGCCGCCGTCGACTC
GGGGGAAAGTGTACCTGGACTTGACGCGGGGAGAGCGCACGGGGGATCCC
GTGGGGGTTGCAGTGCGAGCAGGCTGGACGGCGTATGGGATTGAAGATGT
CGATGCATGGACGACGGTGGAGACGCTGCGACTGCTGGTGGGACAGAATG
TACCGTTTGATTTTGTACGTATGGCATCGGGACGGGTGTTTTAG back to topCoding sequence (CDS) from alignment at ch6:1892070..1894163- >KJC3_008391-T1 ID=KJC3_008391-T1|Name=KJC3_008391-T1|organism=Aspergillus niger KJC3|type=CDS|length=2094bp|location=Sequence derived from alignment at ch6:1892070..1894163- (Aspergillus niger KJC3)
ATGATGCAGACAGCCCTTCATCAGCCCATGGGGATGACACTCTTGGCTGA
TGCCGCTACTTCGTCCCTCACGGCTCTCAAAGGCTCTACCACATCTTCTG
CTTTAACTTCGTTAACCGTGCCTCCGGAGCCTGCACGGACGGTCGTCACA
GTCTACACTCCGGGGCAGGAGGCCATCGTTCAAGTGGTCGCGGATATCCT
CGGCAAGCCATGGACCACCGAAACCTCGCTGTCTACGTTTGGCCGGGGCA
GCAATGCTGTCGTCGTGGGGTTTCTCGCCACGGAAGATTCCATCCCAAGC
TTACAAGTGGATGACCAGACGGCCTGTGTTCTGGTCAACACGCATTGTGT
CGACGATGGATCGTTTCCGGATGACGCACTCACCGAGCGCTGCCATTATG
AGTTCCTGTACTCTTTGCGCAGTCCTTTCTTTCGCCGCGACCTGACGCGC
TTCTTGTCGCTGATCCTGGGCCAGACTCGGCCGCATGAGGACCTGAAGAC
CAAGAACCGGACCAACTTCATCTCCACGACGTTTCCGGATGTGCATGCGG
CCCTGCCAAACCTCGACATTCTCTCTGTGGGGTCGGATGCTGTTGAAATC
CGCGTGGATCTGCTGGTCGATCCTGAACCACCCCAGGGGGCTGAGACATC
CGTGCCGAGCCTTCGCTACGTAGGGCAGCAATTGATGTTGCTTCGGCAGC
ATACGGAGTTGCCCATTATTTTCACCACCCGGTGCACCAAGGAGAACGGC
AAGTTTCCGATGGATGACCCGATGCTTTTCTACAAATATCTCCGGCGGGC
GATTCAGTGGGGAGTGGAGTACATTGATGTGGAGCTGTGGTTGCCCGAAG
ACATCCGGAGACGGCTGTCAGAGGTCAAAGGAAATAGCATCATCATGTCT
GCGTTCCACGACTTCTCGGGGGCGTGGAAGTGGACGTCGCCAGAGGCACC
CCGGATCTTTGCGGAAAGCGCCAAGTACGCGGACATTGTCAAGATGATCG
CCATGGTGACTACGATCGAGGCCAACTACGAACTGGAGTACTTCCGATCG
ACGATCAAGGGGACCTACGGGCCCTACCCACTCCTCTCAGCGGTCAACAT
GGGTCAACTGGGGCAGCTTTCGCGTGCGCTCAACACGGTGTTTTCGCCCA
TCACGCATCCGCTACTGCCGATGATTGCCGCGCCCGGCCAGCTGACCGCC
GCCGAGATCAACGAGGCCCTCCACATCATGGGACAGCTTCCCAAGCGGGA
TTTGTACGCCATTGGATCCTTCCGATCCACGCCGCAATCGATGTTCATGG
AGAAATGCTTCAATGAGCTCAGTCTGCCGCACACGCTGACCTCGATCGAC
CGGGGTCCCTCGGGCTCGATCGAGCGGGTGATCACGCAGCCGAGCTTTGG
GGGAGCCTCCGTTCACCCGCCAATCACCAGTGGCACGAGCAGTATCCCAG
CCATCAGCGAAGCAGCGCAAGCGATCGGGCTGGTGGATACTATCGTGGCG
ATGCGGGGCTCTGGGCGGCCACAGCAGGCACCATCGCCGCAACAGCAGTT
GATGGGGGAGAATGCGACGTGGAAGGGAATTCGGGCGACGTTGACACGGG
ACTATGTGCCGTCGGCGTACCGGGGACGAGCAGCCATCATCTTAGCGGGG
AGCGAGAGCGAAGCATCGGCGACGATCTTTGCGTTGCGCAGTCTGGGAGT
GGGCGCGATCCACACGGTCGGGTTTCGGGCGCGCGGCCCGCTGGCGGAGG
GACTGGAGCCGTTTACGTCGATCCAATCGGTGAAGATGGTGGAGCAGCCG
TTTGTGATGGTGTCGGCGCTGCCCCCAGAGAAGTCACTGCTGGTGCAGCC
GTTGCTGCGGCACTACCGGACGAGTGGACGCACGTCGCCGCCGTCGACTC
GGGGGAAAGTGTACCTGGACTTGACGCGGGGAGAGCGCACGGGGGATCCC
GTGGGGGTTGCAGTGCGAGCAGGCTGGACGGCGTATGGGATTGAAGATGT
CGATGCATGGACGACGGTGGAGACGCTGCGACTGCTGGTGGGACAGAATG
TACCGTTTGATTTTGTACGTATGGCATCGGGACGGGTGTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0003855 | 3-dehydroquinate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR001381 |
| DBxref | PFAM:PF01487 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1892070..1894163 - |
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