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KJC3_008393-T2, KJC3_008393-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008393-T2
Unique NameKJC3_008393-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1904851..1906852-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008393-T2 ID=KJC3_008393-T2|Name=KJC3_008393-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2002bp|location=Sequence derived from alignment at ch6:1904851..1906852- (Aspergillus niger KJC3)
CCAGGGATGATCCAATAGTTCGTGAATACCGATGCGGAGGTTTGCTCGGT
TTGCCCCATTTGGCTTGTTTGCCTGAAGCTAGTGCGGCGCTGATAACGAC
GGAATGACGCCGCGTCTGGCTCTGGTTCAACTCGCAATCACATCCCTCCA
TGGCACGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAGAGCCACAT
GCAGTCTCTCTCAAAGGTACGCTTTGCCGGACACCCTTATACTGCGGTAC
CTTGGCTGATCTTGTCCAGTATTGCGGTAAGCACCGAACATCATCCGACG
GCTCCGCTCGTTCCTGACCGTGCAAGGCTATCGCGACCTTCCTTATCCTA
TCAGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCAC
TCAGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTCACTCCCAAT
GTACGAAGACCGTCCAGGATGAAGTTGTGATCTCACTGACTGTCCGACAA
GTTAACCCTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTG
CATGCACCCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTCGCGC
GTCGTCACATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGT
AGCGGCGTTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGG
TCCAGAAGGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAG
GAAGGGAATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGAT
TGGGTCGGACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGC
TCTATCAGTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCA
GAGCTGGCGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATGGCAA
GACCCGGCTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCG
ATGGTCCTGTTGTGGTCAAGGTTCGTTCGAACACAAATCATAGCCAAAGT
GCAGACACCTCCTGGGCGACATGCTAATCTTGACAGCAAACGAGGCTCAA
TCCGAAACCGCCATTCAAGGCCGTATCTCTCAATTGGGATCTACAAGGAC
CGGATCAAGCGGATCCGCGGCCACCGACTCTACATCCGCGGGATGTCTTG
CAGGTCGCATTCCTTGTCGAGCAAGAAGAAGGCCAACAGGAAGGGCTGGA
GACCCTGCAGAAGGACATGAAACGCGACGGACGCGCAGTGCTGGGCCAGC
TGTCGATCGAGTGGAGAGGCGCGATGGGCGACAAAGGATTCCTAACGACG
GGTAATTTGATGACGCGAAGACGGGCATGAGACAGACCAATCGGACGTAA
TATTTCCTGCTTACTGTCTCTCTGCTGCGTACCTGAATTGCAGCGGGCTT
TTTCCTTGGCCTTTGGCCCCCTTGTGTAACAACACACACACATTCCAGAC
ACTGCAGCCAGCGCAGATCCCGAAGAACCCCCAACTCTCTCTGTCTGTCT
GTGTGTGTGGCAGTCTGAAGACTCACAAGCTCACCGGTGATTTTCCTCAA
CCAATCACCGACTCCACGGAGGCATGCATCAGCGCTGAAGATGAATGGAT
GAGACGGGAGCCAAGCGGATGTTGCACGGATGCGAACCTTCTCAGGGCAG
CCAATCCCAATCCCCTAGCTTACGACACTTTGCGTGGTGGTTACACACGT
TTAAACGGGGACAAAGAAAGCGACGAGACTAGCTACCAACGGCACATCAT
ATGTTCGGGGGCTTATCTAGTACTAGTATAGGTAGGGCGTACAGAAGAAA
CAAAACCAAAAGAAGGTACCTTCCGACGGCGCCGCCCCCGTTAACGCCGA
CGGAAGCTTGGCCGTAACTCAGCCCATTCCATTTCTTTTCTATCTATAGA
TAGGTTCGTTCCTAACGAGGAAGGAGTCGTTGGATTATATCCCTTTACTT
AT
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Coding sequence (CDS) from alignment at ch6:1904851..1906852-

>KJC3_008393-T2 ID=KJC3_008393-T2|Name=KJC3_008393-T2|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch6:1904851..1906852- (Aspergillus niger KJC3)
TTAACCCTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTGC
ATGCACCCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTCGCGCG
TCGTCACATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGTA
GCGGCGTTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGGT
CCAGAAGGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAGG
AAGGGAATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGATT
GGGTCGGACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGCT
CTATCAGTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCAG
AGCTGGCGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATGGCAAG
ACCCGGCTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCGA
TGGTCCTGTTGTGGTCAAGGTTCGTTCGAACACAAATCATAGCCAAAGTG
CAGACACCTCCTGGGCGACATGCTAAGCTATCGCGACCTTCCTTATCCTA
TCAGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCAC
TCAGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTCACTCCCAAT
TATTGCGATGGCACGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAG
AGCCACATGCAGTCTCTCTCAAAGTTAACCCTACCGCCGGCTTTTGGGTC
TGCATATGTGGGCGAGACATTTGCATGCACCCTCAGCGCGAACAATGAAT
TACCGGATGAGGAGACGTCGCGCGTCGTCACATCGGTTCGTATAGTTGCA
GAGATGCAAACACCATCGCAGGTAGCGGCGTTAGACCTAGAACCGGCCGA
AGACACGGCTTCGAAGGACGGGGTCCAGAAGGGCCATTCACTACAGAAAA
TAGTACGGTTTGATCTCAAGGAGGAAGGGAATCACATCCTGGCGGTTAGC
GTCAGCTACACGGAGACATTGATTGGGTCGGACGCGCAAGCAGCCAGCGG
GCGCGTGAGAACTTTCCGCAAGCTCTATCAGTTCGTGGCACAGCCCTGTT
TGAGTGTGCGAACCAAGTCTTCAGAGCTGGCGCCCCTGGAAGTCGAGAAC
AAGACACTCGGACCATATGGCAAGACCCGGCTGCTCCGGTTTGCTCTGGA
AGCACAACTAGAGAATGTAGGCGATGGTCCTGTTGTGGTCAAGGTTCGTT
CGAACACAAATCATAGCCAAAGTGCAGACACCTCCTGGGCGACATGCTAA
GCTATCGCGACCTTCCTTATCCTATCAGTATCCCCTCCCGGCGGCAGACA
CGAAGATCTCAAGCAAAGCATCACTCAGCTATCCCGCCGATAATGTTGAC
GACCAGTTCATCCTCACTCCCAATTATTGCGATGGCACGCCCTCGCGCTC
ACTCGGGCGCTGATGCCCCTAAAGAGCCACATGCAGTCTCTCTCAAAGTT
AACCCTACCGCCGGCTTTTGGGTCTGCATATGTGGGCGAGACATTTGCAT
GCACCCTCAGCGCGAACAATGAATTACCGGATGAGGAGACGTCGCGCGTC
GTCACATCGGTTCGTATAGTTGCAGAGATGCAAACACCATCGCAGGTAGC
GGCGTTAGACCTAGAACCGGCCGAAGACACGGCTTCGAAGGACGGGGTCC
AGAAGGGCCATTCACTACAGAAAATAGTACGGTTTGATCTCAAGGAGGAA
GGGAATCACATCCTGGCGGTTAGCGTCAGCTACACGGAGACATTGATTGG
GTCGGACGCGCAAGCAGCCAGCGGGCGCGTGAGAACTTTCCGCAAGCTCT
ATCAGTTCGTGGCACAGCCCTGTTTGAGTGTGCGAACCAAGTCTTCAGAG
CTGGCGCCCCTGGAAGTCGAGAACAAGACACTCGGACCATATGGCAAGAC
CCGGCTGCTCCGGTTTGCTCTGGAAGCACAACTAGAGAATGTAGGCGATG
GTCCTGTTGTGGTCAAGGTTCGTTCGAACACAAATCATAGCCAAAGTGCA
GACACCTCCTGGGCGACATGCTAAGCTATCGCGACCTTCCTTATCCTATC
AGTATCCCCTCCCGGCGGCAGACACGAAGATCTCAAGCAAAGCATCACTC
AGCTATCCCGCCGATAATGTTGACGACCAGTTCATCCTCACTCCCAATTA
TTGCGATGGCACGCCCTCGCGCTCACTCGGGCGCTGATGCCCCTAAAGAG
CCACATGCAGTCTCTCTCAAAGTTAACCCTACCGCCGGCTTTTGGGTCTG
CATATGTGGGCGAGACATTTGCATGCACCCTCAGCGCGAACAATGAATTA
CCGGATGAGGAGACGTCGCGCGTCGTCACATCGGTTCGTATAGTTGCAGA
GATGCAAACACCATCGCAGGTAGCGGCGTTAGACCTAGAACCGGCCGAAG
ACACGGCTTCGAAGGACGGGGTCCAGAAGGGCCATTCACTACAGAAAATA
GTACGGTTTGATCTCAAGGAGGAAGGGAATCACATCCTGGCGGTTAGCGT
CAGCTACACGGAGACATTGATTGGGTCGGACGCGCAAGCAGCCAGCGGGC
GCGTGAGAACTTTCCGCAAGCTCTATCAGTTCGTGGCACAGCCCTGTTTG
AGTGTGCGAACCAAGTCTTCAGAGCTGGCGCCCCTGGAAGTCGAGAACAA
GACACTCGGACCATATGGCAAGACCCGGCTGCTCCGGTTTGCTCTGGAAG
CACAACTAGAGAATGTAGGCGATGGTCCTGTTGTGGTCAAGGTTCGTTCG
AACACAAATCATAGCCAAAGTGCAGACACCTCCTGGGCGACATGCTAAGC
TATCGCGACCTTCCTTATCCTATCAGTATCCCCTCCCGGCGGCAGACACG
AAGATCTCAAGCAAAGCATCACTCAGCTATCCCGCCGATAATGTTGACGA
CCAGTTCATCCTCACTCCCAATTATTGCGATGGCACGCCCTCGCGCTCAC
TCGGGCGCTGATGCCCCTAAAGAGCCACATGCAGTCTCTCTCAAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008393KJC3_008393Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T2KJC3_008393-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T2.cdsKJC3_008393-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T2.utr3p1KJC3_008393-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T2.exon4KJC3_008393-T2.exon4Aspergillus niger KJC3exon
KJC3_008393-T2.exon3KJC3_008393-T2.exon3Aspergillus niger KJC3exon
KJC3_008393-T2.exon2KJC3_008393-T2.exon2Aspergillus niger KJC3exon
KJC3_008393-T2.exon1KJC3_008393-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008393-T2.utr5p1KJC3_008393-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010378
DBxrefPFAM:PF06159
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1904851..1906852 -
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