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KJC3_008396-T1, KJC3_008396-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008396-T1
Unique NameKJC3_008396-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1911834..1914086+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008396-T1 ID=KJC3_008396-T1|Name=KJC3_008396-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2253bp|location=Sequence derived from alignment at ch6:1911834..1914086+ (Aspergillus niger KJC3)
CCGCAAATTCCCACTCTTTTTCGTCTCCGGCTGTCCCACACTCCAAACTT
GACTCGACCCTCTTCTCTCCTCGACTCTTCCCACGCCTTTTGTCTTCTCC
TGTCTTGTCTTCAAATCCCGCCGACACCCCATATCGCCTGCATTGCGACC
CCATCGATTGGTTCGCCCACTACGAATACACTGCACGGGTTACCGTGGAC
GGTTTTTGAATACTTGGTGTTAATCGAGCGACCAAGTGTCCCGGTGGAGA
GGGATTTCGATATAGAAACTACGAAACTTGACTACAATTTTCAACACTCT
CATCGCCGGATCTCAGGAAAAGAGGCCCGTAAAGCCTCAAAAACACATCA
TGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATATCTCGAT
GATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGCAGCAACA
TCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACCAATACCG
AATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAACTTTGAC
TCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATGCCAGTTC
TGACATGGACTTTCTGAACATTCTGGGAGGTGAGTTTCTGCAGGCTGTCT
TTAAAAACACCACATCATGAAACTCCTGGATCCAAGCTGGGTGGTTACGG
ACAACTGTTGGGGCATTGTTGAAGCAGCTGCATACTTCATACATGCGCAC
AGCTTCAACGGTTGCTTCAACCATCAACGCTTGTCAATGTGCTCTTCCCA
TATCTTCCCCCCCGCCATCCTCCTCTGCCTTTTTTTTTTTTTTTTTTTTC
TTTTTTTCCTTGGTCCAATTTGCTTGATTGTGCGAATCTCGTACCCTCTC
AGGGACTAGTACTAGCGGGAGAAGCTTTACTATATCCCTGAGACACGAGC
GCTCCTTCCGCCGCGCACCTCATCTGCACGTCCGCTCATTGGCCCGTCTG
CTGCATGGGGTCCTCTTTGTCTGTGCGCGATCGCAGAACGTGCAGCGGCC
TTGCCTTGGCCTGGGATAACGCCAATCGCTCTCGTGATGGCGCCATACCA
CGTGACCCGTGCAGCGTGGGAGGTTGCATAGAGACACCATTCGTGGCACA
TTCAAGATGATCTGGGCTCGTGTCGATCCCAGTGATGCTGTGCTTTATAC
CCCAACCGCCCAGCTTGGGACCCTTTCCCCTTTGTCGACTCTGCTTGCCT
CATCAGGGGCCTTCATCCAATCATGACAGTCATGACTAACGTTCTTTAGA
AGGCTTCGGCAACGTCAACGACATTTCCTCTACCATGAACTCCATCAATA
CCCAACCTTTGCCCGTCCAGAACACACAGTACTCAGCAGTTCCGTCCCTG
CCGAACGGTCCTCTGAACATCAATGCTGCTCCCAGCCAGTCGGCTTCTCA
TCCCTCCCCGCAGTCTTCGATCACATCTCCGCCTTCCGCGGCTGCCACCC
CCGCCCCGGCCCCGGCTACCACCGCCCCCGCATCAGGACCTAAGCGCAAG
AACACTCAGAAGACCCCAGCTATGAGCGTAGAGGAGGCCGCGCGCATTGC
CGCTGAAGAAGACAAGCGTCGCCGCAACACCGCCGCGAGCGCCCGCTTCC
GCGTGAAGAAGAAGATGCGTGAGCAAGCTCTTGAGAAGACCGTCAAGGAG
ACCACCGAGAAGAACACTGCGCTGGAAGCCCGCGTCACGGCTCTGGAGCT
GGAAAACCAATGGCTCAAGAACCTTATCACCGAGAAGAACGGTCAAACCT
CGGAAGAGGCCAAGAAGTCGGAGAGCGACATCGCCGCCATGTTCAAGAAG
TTCCTGGCTTCTCAACAGCAGAAGGAGACCGAACGGAGTAGTTCCGAGTC
CAAGATCGGTGTGGGCACTGCCTAGACTCGAAACCTCGTGTTATCTTTTT
CTTGCTTGGTCTTTGAGCTTTGTAGATGATGTTTATGCAGAGTCGCAGAT
TCTCCCATCATTTTTTTTTACTTCCCACTTTCTATTTTTTTTTTTTTATC
TTCTTTCTTATATCTAATGGTGTACATGAGGGGATGGCGTCGCGGTGCAA
GGAAATACCTAGGCTCGTCGGTGGCATGAGTGATGTTTACGACGTACAAA
TTTCGATCTAAACAAGATCAGATCAGGAAGCCGTTGTGCATACCACACAC
TGCGCCTGTTTCTAAAAAGCATGACAATGAAAAGAAACATTGACAATCAG
TTA
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Coding sequence (CDS) from alignment at ch6:1911834..1914086+

>KJC3_008396-T1 ID=KJC3_008396-T1|Name=KJC3_008396-T1|organism=Aspergillus niger KJC3|type=CDS|length=1812bp|location=Sequence derived from alignment at ch6:1911834..1914086+ (Aspergillus niger KJC3)
ATGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATATCTCGA
TGATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGCAGCAAC
ATCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACCAATACC
GAATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAACTTTGA
CTCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATGCCAGTT
CTGACATGGACTTTCTGAACATTCTGGGAGAAGGCTTCGGCAACGTCAAC
GACATTTCCTCTACCATGAACTCCATCAATACCCAACCTTTGCCCGTCCA
GAACACACAGTACTCAGCAGTTCCGTCCCTGCCGAACGGTCCTCTGAACA
TCAATGCTGCTCCCAGCCAGTCGGCTTCTCATCCCTCCCCGCAGTCTTCG
ATCACATCTCCGCCTTCCGCGGCTGCCACCCCCGCCCCGGCCCCGGCTAC
CACCGCCCCCGCATCAGGACCTAAGCGCAAGAACACTCAGAAGACCCCAG
CTATGAGCGTAGAGGAGGCCGCGCGCATTGCCGCTGAAGAAGACAAGCGT
CGCCGCAACACCGCCGCGAGCGCCCGCTTCCGCGTGAAGAAGAAGATGCG
TGAGCAAGCTCTTGAGAAGACCGTCAAGGAGACCACCGAGAAGAACACTG
CGCTGGAAGCCCGCGTCACGGCTCTGGAGCTGGAAAACCAATGGCTCAAG
AACCTTATCACCGAGAAGAACGGTCAAACCTCGGAAGAGGCCAAGAAGTC
GGAGAGCGACATCGCCGCCATGTTCAAGAAGTTCCTGGCTTCTCAACAGC
AGAAGGAGACCGAACGGAGTAGTTCCGAGTCCAAGATCGGTGTGGGCACT
GCCTAGATGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATA
TCTCGATGATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGC
AGCAACATCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACC
AATACCGAATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAA
CTTTGACTCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATG
CCAGTTCTGACATGGACTTTCTGAACATTCTGGGAGAAGGCTTCGGCAAC
GTCAACGACATTTCCTCTACCATGAACTCCATCAATACCCAACCTTTGCC
CGTCCAGAACACACAGTACTCAGCAGTTCCGTCCCTGCCGAACGGTCCTC
TGAACATCAATGCTGCTCCCAGCCAGTCGGCTTCTCATCCCTCCCCGCAG
TCTTCGATCACATCTCCGCCTTCCGCGGCTGCCACCCCCGCCCCGGCCCC
GGCTACCACCGCCCCCGCATCAGGACCTAAGCGCAAGAACACTCAGAAGA
CCCCAGCTATGAGCGTAGAGGAGGCCGCGCGCATTGCCGCTGAAGAAGAC
AAGCGTCGCCGCAACACCGCCGCGAGCGCCCGCTTCCGCGTGAAGAAGAA
GATGCGTGAGCAAGCTCTTGAGAAGACCGTCAAGGAGACCACCGAGAAGA
ACACTGCGCTGGAAGCCCGCGTCACGGCTCTGGAGCTGGAAAACCAATGG
CTCAAGAACCTTATCACCGAGAAGAACGGTCAAACCTCGGAAGAGGCCAA
GAAGTCGGAGAGCGACATCGCCGCCATGTTCAAGAAGTTCCTGGCTTCTC
AACAGCAGAAGGAGACCGAACGGAGTAGTTCCGAGTCCAAGATCGGTGTG
GGCACTGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008396KJC3_008396Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008396-T1.utr5p1KJC3_008396-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008396-T1.exon1KJC3_008396-T1.exon1Aspergillus niger KJC3exon
KJC3_008396-T1.exon2KJC3_008396-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008396-T1.cdsKJC3_008396-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008396-T1.utr3p1KJC3_008396-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008396-T1KJC3_008396-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF07716
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1911834..1914086 +
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