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KJC3_008398-T1, KJC3_008398-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008398-T1
Unique NameKJC3_008398-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1917728..1920845+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008398-T1 ID=KJC3_008398-T1|Name=KJC3_008398-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3118bp|location=Sequence derived from alignment at ch6:1917728..1920845+ (Aspergillus niger KJC3)
CTTCGTCCACTGTCAACATGGCAGAAATCTTTACTATTATATCATTAGTA
TAATCAGGTAACCTATTTTTTAATGTCTTCTTTGCGTTTTGGGCTTTCGA
TGACCTGTCTACCCTATCTGGTAAAGCTACAGGGCAGAATTCAAGCGCTG
TCAACGAACTCGGAGCGCCACCACATTATGGCAACATGAGGAGAGAATCT
TTACCAGGCAACAAACTAATTAACCAATTCCCTGGTGATGTCGTCATGGG
ATCCCAAGATACGGCCTCTACCGCCTGATGTAGTGGCGAAGCTCAAATCC
TCAACTGCCATTACACACTTGAACGGAGTCATTGTAGAGCTAGTCAAGAA
TGCATTAGATGCAAATGCCCGCACAGTCTGTGTCACGGTCGACTTCGTTC
GCGGGGGCTGTATAGTCGAAGATGATGGAGATGGCATTCCTCCAGCGGAG
TTTGGACCAGACGGAGGATTGGGAAAAGCGCACCGTAAGTTTAACTGCCA
CATAACAATACCTTTTACTCATAAGTGACGCAGATACTTCAAAATACCAT
TCGAACCATACTATTGAAGGACGCAAAGGGCTTTTTCTTGCCTCGCTTGC
AGCTCTTTCTCTGCTGACGATCACGTCACATCATGTTCGCCATTCGAGTA
CTAATACTGTCACTTTCCATCACTTGACGCCGGTTGCTCGTTTGATGCCA
GCTCCAGTTTATCAGGAGCTGAGGTTTAGTGCCCATGGCACCTCTGTCAC
AGTAAATGATCTGTTCGGGAATATGCCCGTGCGCGTAAAAAGCCGAGCCT
TGGCTCTTCAAAGACCGGATGAGCTGGAGCGGCAGTGGGATGAATTGAGG
CACTTTTTGGTGTCGTTCATGGTTGCAAACGACAGGGTGGCTAAGCTAGT
GATCCTAGACGCTCATAGAGACAAAAAGATTACAGTTTGCCCCCAGGGAC
TTGCAAGACAATATGGCGGGGAGCCTGATCTACAGCGACTGCGTTCCATC
CTGGCACAGTCGGGGCTTGTCGGGGCTCAGAATACGGGCATATGGGATAC
CGTATCAGCCAGCGTTTCCGACTTCACGATTCATGCAGCAGTCTCTTTGA
CGCCTAGTCCTACGAAGAAGGTCCAGTTCGTCTCTTTAGGCTCGACCCCG
GTGTTCGCGAGGAGCAACGCGAATCTGATCTATGCGGAAGTCAATCGCTC
ATTTGCCTTGTCGGACTTTGGGTCTATGAAAAACTGCTCCTCTGCAGTTG
AAGCGCCCGTCCGGGCTGCTGATGGCCAACTCATGCATAGCAAACCTGCG
TCTAAAGCAGTCAATAAATGGCCAATGTTCTATATACGTATAGACAGCTG
CAATGAGTGGAGTATCGACGACGACACGCAAGAACTTCCGGAATCAGACA
AGTCCCTCCAACGTATCATAGATGTGCTTTCGACAATGATCAACGAATTT
CTCAGGCAAAGCAGCTTACGCCCACGGACTGGGAAAAGGAAAAGAAGTAC
GCCCAATGTACCACCAGCTACTACGCGCCATAGCAGCGTGAAGGCCGGAA
GGTCTCTATCTCCAGGAGGTGAAGTCTCCGCCACCGAAGAAACTCTCGGC
AATCAGCTCAGGCTCCCCTCTTTGCGAAGACCACCCAATGTCAGTCATCA
CTTCGGAGATTGGACCAGGATAAAAAGTGCGAAGCCGGAAACGGTTAGCA
AGAGGTTTCCTTTACGCGGTCGCGAACCCAGGTCAACTCGCTCAGAGAAT
TACCCAGCACATCAAGTCCAGGATCATTTGAACCAGCAACCAGCGCTCCT
ATCTGCAAGCAATGAAGGCACGGCCACTGAGCCCCGATCTCCTGTACTGG
AAGAACCAGAGAAGCACGAAGAGCAACTTAATCAGATTCATGAAGAGACA
GCTACCGACAGAATGACGCCATGGGTCGATCCTTACACGGGTAGACGCCA
CTTAATCAACTCGCGCACTGGTCAGTCCATACTCCATGGGTCTTCAGTAG
CAGCGGACGTGGCGCTGCGGCCCCGGTCCACTGGGTGTCTACCAGAACCA
CATCGCGCTCCAGATGAAGTGCAGCGACCAAGATCGGTCGATCTGCAGAG
GACCGACAACAAGTGGGTTGAGAAACTTTTGGACAATTGGATTAACCCTG
TTTTTGGTCGCCCAGAGAGGCCTATCAGTGCGATGGATGTCAGTGCTGGC
CACGAGACAGCTCGCCCCGGGTCTAGCTCGCGGAACAATCAGGGCGAGCT
ATGCGGTTTCGAAAGCATGGGAGTGTCGAAGTTTCGCGGCAAACTGCGCA
AACAGGATTTAAGAGCTGCAGAAATTATCGCCCAAGTGGATCAGAAATTC
ATCCTGGTAAAGATGCAATTGCCCTCCAATAGCCCTGGGGAGCCTGCATC
AAACCTGATCTTGATCGATCAGCACGCTGCGGATGAACGCTGCCGGGTCG
AGGCACTCATGGCAGAGCTGTTCACATCAGAAGAAGATAGCCCGGGCTCC
ATCCAAACCATCACATTGGATCCCATTATTTTTGAGATACCCGCTACCGA
AGCATCCCTATTTGAACGATATAGAAATTTCTTCCACTCTTGGGGTGTAG
CTTACACCATGGAACAAGGACCCAAAGACAAGAACGTCTTCATTTTCGTA
CACACCCTCCCAACCCTCATCGCCGAGCGCTGCCGCACCGAGCCCAACCT
AGTCTCTGACCTCATCCGCGGCGAGATCTGGAAACGCGAAGAAGAAAACG
GCCGAAGCCGACAGCCTCACCATCCCACCGGCTTCGGCGCTTCTCGTCCA
GATATGGCCCAAACCAGCAGCAGTTGGGTAGACCGACTCGACGGCTGTCC
TCGAGGGATCATCGACCTGCTGAACTCTCGCGCATGCCGCACGGCAGTCA
TGTTCAATGATGTTCTGGACAAGAATGAATGCCAGAGTTTGGTCCGACGA
CTCGCAGATTGCGTTTTCCCTTTCCAGTGCGCGCACGGCCGGCCCTCGAT
GATACCTATTTTGGAAATGGGGGCTGCTGTATCATTGGATCAGACTCAGT
CGGATGAATATGAAGGTCCTGGTTTTGTTGGCATGTTTAGGAAATGGCAG
GATGCGAAGACTGGTTAG
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Coding sequence (CDS) from alignment at ch6:1917728..1920845+

>KJC3_008398-T1 ID=KJC3_008398-T1|Name=KJC3_008398-T1|organism=Aspergillus niger KJC3|type=CDS|length=5664bp|location=Sequence derived from alignment at ch6:1917728..1920845+ (Aspergillus niger KJC3)
ATGTCGTCATGGGATCCCAAGATACGGCCTCTACCGCCTGATGTAGTGGC
GAAGCTCAAATCCTCAACTGCCATTACACACTTGAACGGAGTCATTGTAG
AGCTAGTCAAGAATGCATTAGATGCAAATGCCCGCACAGTCTGTGTCACG
GTCGACTTCGTTCGCGGGGGCTGTATAGTCGAAGATGATGGAGATGGCAT
TCCTCCAGCGGAGTTTGGACCAGACGGAGGATTGGGAAAAGCGCACCATA
CTTCAAAATACCATTCGAACCATACTATTGAAGGACGCAAAGGGCTTTTT
CTTGCCTCGCTTGCAGCTCTTTCTCTGCTGACGATCACGTCACATCATGT
TCGCCATTCGAGTACTAATACTGTCACTTTCCATCACTTGACGCCGGTTG
CTCGTTTGATGCCAGCTCCAGTTTATCAGGAGCTGAGGTTTAGTGCCCAT
GGCACCTCTGTCACAGTAAATGATCTGTTCGGGAATATGCCCGTGCGCGT
AAAAAGCCGAGCCTTGGCTCTTCAAAGACCGGATGAGCTGGAGCGGCAGT
GGGATGAATTGAGGCACTTTTTGGTGTCGTTCATGGTTGCAAACGACAGG
GTGGCTAAGCTAGTGATCCTAGACGCTCATAGAGACAAAAAGATTACAGT
TTGCCCCCAGGGACTTGCAAGACAATATGGCGGGGAGCCTGATCTACAGC
GACTGCGTTCCATCCTGGCACAGTCGGGGCTTGTCGGGGCTCAGAATACG
GGCATATGGGATACCGTATCAGCCAGCGTTTCCGACTTCACGATTCATGC
AGCAGTCTCTTTGACGCCTAGTCCTACGAAGAAGGTCCAGTTCGTCTCTT
TAGGCTCGACCCCGGTGTTCGCGAGGAGCAACGCGAATCTGATCTATGCG
GAAGTCAATCGCTCATTTGCCTTGTCGGACTTTGGGTCTATGAAAAACTG
CTCCTCTGCAGTTGAAGCGCCCGTCCGGGCTGCTGATGGCCAACTCATGC
ATAGCAAACCTGCGTCTAAAGCAGTCAATAAATGGCCAATGTTCTATATA
CGTATAGACAGCTGCAATGAGTGGAGTATCGACGACGACACGCAAGAACT
TCCGGAATCAGACAAGTCCCTCCAACGTATCATAGATGTGCTTTCGACAA
TGATCAACGAATTTCTCAGGCAAAGCAGCTTACGCCCACGGACTGGGAAA
AGGAAAAGAAGTACGCCCAATGTACCACCAGCTACTACGCGCCATAGCAG
CGTGAAGGCCGGAAGGTCTCTATCTCCAGGAGGTGAAGTCTCCGCCACCG
AAGAAACTCTCGGCAATCAGCTCAGGCTCCCCTCTTTGCGAAGACCACCC
AATGTCAGTCATCACTTCGGAGATTGGACCAGGATAAAAAGTGCGAAGCC
GGAAACGGTTAGCAAGAGGTTTCCTTTACGCGGTCGCGAACCCAGGTCAA
CTCGCTCAGAGAATTACCCAGCACATCAAGTCCAGGATCATTTGAACCAG
CAACCAGCGCTCCTATCTGCAAGCAATGAAGGCACGGCCACTGAGCCCCG
ATCTCCTGTACTGGAAGAACCAGAGAAGCACGAAGAGCAACTTAATCAGA
TTCATGAAGAGACAGCTACCGACAGAATGACGCCATGGGTCGATCCTTAC
ACGGGTAGACGCCACTTAATCAACTCGCGCACTGGTCAGTCCATACTCCA
TGGGTCTTCAGTAGCAGCGGACGTGGCGCTGCGGCCCCGGTCCACTGGGT
GTCTACCAGAACCACATCGCGCTCCAGATGAAGTGCAGCGACCAAGATCG
GTCGATCTGCAGAGGACCGACAACAAGTGGGTTGAGAAACTTTTGGACAA
TTGGATTAACCCTGTTTTTGGTCGCCCAGAGAGGCCTATCAGTGCGATGG
ATGTCAGTGCTGGCCACGAGACAGCTCGCCCCGGGTCTAGCTCGCGGAAC
AATCAGGGCGAGCTATGCGGTTTCGAAAGCATGGGAGTGTCGAAGTTTCG
CGGCAAACTGCGCAAACAGGATTTAAGAGCTGCAGAAATTATCGCCCAAG
TGGATCAGAAATTCATCCTGGTAAAGATGCAATTGCCCTCCAATAGCCCT
GGGGAGCCTGCATCAAACCTGATCTTGATCGATCAGCACGCTGCGGATGA
ACGCTGCCGGGTCGAGGCACTCATGGCAGAGCTGTTCACATCAGAAGAAG
ATAGCCCGGGCTCCATCCAAACCATCACATTGGATCCCATTATTTTTGAG
ATACCCGCTACCGAAGCATCCCTATTTGAACGATATAGAAATTTCTTCCA
CTCTTGGGGTGTAGCTTACACCATGGAACAAGGACCCAAAGACAAGAACG
TCTTCATTTTCGTACACACCCTCCCAACCCTCATCGCCGAGCGCTGCCGC
ACCGAGCCCAACCTAGTCTCTGACCTCATCCGCGGCGAGATCTGGAAACG
CGAAGAAGAAAACGGCCGAAGCCGACAGCCTCACCATCCCACCGGCTTCG
GCGCTTCTCGTCCAGATATGGCCCAAACCAGCAGCAGTTGGGTAGACCGA
CTCGACGGCTGTCCTCGAGGGATCATCGACCTGCTGAACTCTCGCGCATG
CCGCACGGCAGTCATGTTCAATGATGTTCTGGACAAGAATGAATGCCAGA
GTTTGGTCCGACGACTCGCAGATTGCGTTTTCCCTTTCCAGTGCGCGCAC
GGCCGGCCCTCGATGATACCTATTTTGGAAATGGGGGCTGCTGTATCATT
GGATCAGACTCAGTCGGATGAATATGAAGGTCCTGGTTTTGTTGGCATGT
TTAGGAAATGGCAGGATGCGAAGACTGGTTAGATGTCGTCATGGGATCCC
AAGATACGGCCTCTACCGCCTGATGTAGTGGCGAAGCTCAAATCCTCAAC
TGCCATTACACACTTGAACGGAGTCATTGTAGAGCTAGTCAAGAATGCAT
TAGATGCAAATGCCCGCACAGTCTGTGTCACGGTCGACTTCGTTCGCGGG
GGCTGTATAGTCGAAGATGATGGAGATGGCATTCCTCCAGCGGAGTTTGG
ACCAGACGGAGGATTGGGAAAAGCGCACCATACTTCAAAATACCATTCGA
ACCATACTATTGAAGGACGCAAAGGGCTTTTTCTTGCCTCGCTTGCAGCT
CTTTCTCTGCTGACGATCACGTCACATCATGTTCGCCATTCGAGTACTAA
TACTGTCACTTTCCATCACTTGACGCCGGTTGCTCGTTTGATGCCAGCTC
CAGTTTATCAGGAGCTGAGGTTTAGTGCCCATGGCACCTCTGTCACAGTA
AATGATCTGTTCGGGAATATGCCCGTGCGCGTAAAAAGCCGAGCCTTGGC
TCTTCAAAGACCGGATGAGCTGGAGCGGCAGTGGGATGAATTGAGGCACT
TTTTGGTGTCGTTCATGGTTGCAAACGACAGGGTGGCTAAGCTAGTGATC
CTAGACGCTCATAGAGACAAAAAGATTACAGTTTGCCCCCAGGGACTTGC
AAGACAATATGGCGGGGAGCCTGATCTACAGCGACTGCGTTCCATCCTGG
CACAGTCGGGGCTTGTCGGGGCTCAGAATACGGGCATATGGGATACCGTA
TCAGCCAGCGTTTCCGACTTCACGATTCATGCAGCAGTCTCTTTGACGCC
TAGTCCTACGAAGAAGGTCCAGTTCGTCTCTTTAGGCTCGACCCCGGTGT
TCGCGAGGAGCAACGCGAATCTGATCTATGCGGAAGTCAATCGCTCATTT
GCCTTGTCGGACTTTGGGTCTATGAAAAACTGCTCCTCTGCAGTTGAAGC
GCCCGTCCGGGCTGCTGATGGCCAACTCATGCATAGCAAACCTGCGTCTA
AAGCAGTCAATAAATGGCCAATGTTCTATATACGTATAGACAGCTGCAAT
GAGTGGAGTATCGACGACGACACGCAAGAACTTCCGGAATCAGACAAGTC
CCTCCAACGTATCATAGATGTGCTTTCGACAATGATCAACGAATTTCTCA
GGCAAAGCAGCTTACGCCCACGGACTGGGAAAAGGAAAAGAAGTACGCCC
AATGTACCACCAGCTACTACGCGCCATAGCAGCGTGAAGGCCGGAAGGTC
TCTATCTCCAGGAGGTGAAGTCTCCGCCACCGAAGAAACTCTCGGCAATC
AGCTCAGGCTCCCCTCTTTGCGAAGACCACCCAATGTCAGTCATCACTTC
GGAGATTGGACCAGGATAAAAAGTGCGAAGCCGGAAACGGTTAGCAAGAG
GTTTCCTTTACGCGGTCGCGAACCCAGGTCAACTCGCTCAGAGAATTACC
CAGCACATCAAGTCCAGGATCATTTGAACCAGCAACCAGCGCTCCTATCT
GCAAGCAATGAAGGCACGGCCACTGAGCCCCGATCTCCTGTACTGGAAGA
ACCAGAGAAGCACGAAGAGCAACTTAATCAGATTCATGAAGAGACAGCTA
CCGACAGAATGACGCCATGGGTCGATCCTTACACGGGTAGACGCCACTTA
ATCAACTCGCGCACTGGTCAGTCCATACTCCATGGGTCTTCAGTAGCAGC
GGACGTGGCGCTGCGGCCCCGGTCCACTGGGTGTCTACCAGAACCACATC
GCGCTCCAGATGAAGTGCAGCGACCAAGATCGGTCGATCTGCAGAGGACC
GACAACAAGTGGGTTGAGAAACTTTTGGACAATTGGATTAACCCTGTTTT
TGGTCGCCCAGAGAGGCCTATCAGTGCGATGGATGTCAGTGCTGGCCACG
AGACAGCTCGCCCCGGGTCTAGCTCGCGGAACAATCAGGGCGAGCTATGC
GGTTTCGAAAGCATGGGAGTGTCGAAGTTTCGCGGCAAACTGCGCAAACA
GGATTTAAGAGCTGCAGAAATTATCGCCCAAGTGGATCAGAAATTCATCC
TGGTAAAGATGCAATTGCCCTCCAATAGCCCTGGGGAGCCTGCATCAAAC
CTGATCTTGATCGATCAGCACGCTGCGGATGAACGCTGCCGGGTCGAGGC
ACTCATGGCAGAGCTGTTCACATCAGAAGAAGATAGCCCGGGCTCCATCC
AAACCATCACATTGGATCCCATTATTTTTGAGATACCCGCTACCGAAGCA
TCCCTATTTGAACGATATAGAAATTTCTTCCACTCTTGGGGTGTAGCTTA
CACCATGGAACAAGGACCCAAAGACAAGAACGTCTTCATTTTCGTACACA
CCCTCCCAACCCTCATCGCCGAGCGCTGCCGCACCGAGCCCAACCTAGTC
TCTGACCTCATCCGCGGCGAGATCTGGAAACGCGAAGAAGAAAACGGCCG
AAGCCGACAGCCTCACCATCCCACCGGCTTCGGCGCTTCTCGTCCAGATA
TGGCCCAAACCAGCAGCAGTTGGGTAGACCGACTCGACGGCTGTCCTCGA
GGGATCATCGACCTGCTGAACTCTCGCGCATGCCGCACGGCAGTCATGTT
CAATGATGTTCTGGACAAGAATGAATGCCAGAGTTTGGTCCGACGACTCG
CAGATTGCGTTTTCCCTTTCCAGTGCGCGCACGGCCGGCCCTCGATGATA
CCTATTTTGGAAATGGGGGCTGCTGTATCATTGGATCAGACTCAGTCGGA
TGAATATGAAGGTCCTGGTTTTGTTGGCATGTTTAGGAAATGGCAGGATG
CGAAGACTGGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008398KJC3_008398Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008398-T1.utr5p1KJC3_008398-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008398-T1.exon1KJC3_008398-T1.exon1Aspergillus niger KJC3exon
KJC3_008398-T1.exon2KJC3_008398-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008398-T1.cdsKJC3_008398-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008398-T1KJC3_008398-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037198
DBxrefInterPro:IPR036890
DBxrefInterPro:IPR014790
DBxrefPFAM:PF08676
DBxrefPFAM:PF13589
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1917728..1920845 +
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