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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1954919..1956850+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008403-T1 ID=KJC3_008403-T1|Name=KJC3_008403-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1932bp|location=Sequence derived from alignment at ch6:1954919..1956850+ (Aspergillus niger KJC3)
CAGAACCTTCTTATTTATATGATACAGTTTCTCGAGAACCACACCCTCTT
TTTTCACTTCCAGTCCAGCCCAACCCAAACCGAGAAGTTGACCGATACTG
CCTGCGTGACCCTATCGGGTACACCCGTTCTGGTTCTAGTCGCTCGTCAG
GTCCCAAACAATATACAAGACTACTTACGTCCACTTGCCAGCGCTGCTCC
GCAATCTGACTCTTTTTTTCTCTTCGGCCGTTCCATTCTCAATTCACTGC
CTCTTCCTTTCTTTGGGTCCGAGGATTTATGTATGTCGCATACCCCCCGT
TTCATCTCTTCAATGGACTCTCTTTCTATAAAGCCTCCCCCCCTCCAACT
ACCTCATCCACCCGCTCTCTCTTTCCCCTCCTTGGCCTCGACCCATGCTC
TGTCATGAGCTGTGTCTGTCTCCCCTCATAAATGGAATCACGCTTAGCAG
ATGTCCATGAATGAATCTCACTCGGGTAGAGGACTAGGTTTTGCGATCAG
GACTCTGTTTCGCTCCTCCCCATCGCCCTCCCCGACTCCTACCCCGCGAC
ATCGAGTCTCTCTCCTCCGTCGAGGTCGGAGTATATTCTCCAACAGGTAC
GGTCTCCATTGACTTTTCAGTCACTTGAGTCCCATGACGCTTGCTATTCT
TACCCCGTATTTTGCTATGGGGCCGTTCACTTCACTGTTCCCTTCATCTC
CGGCTTCAATCGCTCCGTTGGACAATTGTGAAGACAAACCGTTGTGAAGC
AAATGACTAAGTCTCTTTCTGAGCAGGAACCCTCGAAACCCGAGTAAACA
TTCGTCCGAGTTCCCAATGCATGACTTCCAGCAAACTAACTCGGCTGCGA
TGGTGGGACTTGCCCAAGCGTCTGCAGGCGACAACTTTGACATCTTCCAA
TGGCACCCTCGATACCAAAACTGCCAGCGATACTTCCTAGATCATGCGCA
ACACAGCGATGCGGTCCAAGCACTTTCCGCTTTTCTGAATATTCGTCTCC
CATTTCAATGGCAATCGAACCCTGTCGTAAATTCTCACGCCGACCCATCA
CGATCCGCCGCTAGCCAATCCTCTGCATCCTCACCTGCCTCGAATCTACC
TCCGTCTGTTTCATTGATTCCATACATCCGCCGCCTGGTGGCCACGGGAA
TGGATTTCCCTGGCGTGTTACATGGGTTTTTCGGAGACGAATGGGGTGCG
GGCATTGGACCTTTGCACGAGCAGGAACGGCGCAATTACCTCTTCGCCGC
GAAGAGTGGTGGTTGGGCGGCCGTGAAAAAGGATTACGATATGCCTCCGC
TCGAGACAATTCCGTTCCTACGTCCCTTACAGGGACCGCTAGATTCGGAG
ATTGAGGCGGCGGAGCGGAGTTGGAGCGAATGGCTTGCCATGGAAGACTG
GATGGTTGGGCCTCGAGCGCCTGACATTCTTCGAGACTCATCCTCACAAA
CTTCACGACATCACAGCTCACGAGGGTAATAAATCATTATAGGGTGCTCC
GGATTTTCTTTTTCTGTCTTTTCTGTTTATTCTTTTCTGCCGCCTTTTGC
TATTTGGCTTTTTCTGTCCTATTTACACTGCTTTAACCCAACACTAGCCA
CGCTGGCGGTAGCACGGAGTTGGTGAGTCTCATAGCATGAAATAACGATC
ATACGATATCTTGAATCATGAGCGCGATAGACATCGCAGGTCCACATAAT
GGTGTTCCGGCTTCAATTATTGAAGGAGCCGTGCGAACATCTCGCAAGGG
GCCAAAGATACCATACCACAGAACAACAATTGAAATAAAACATCCGAAAA
GAATCAGTGAAACCAATTAATCAATCAAACATCCATCCCTTCTTAGCCCC
TATTCAGCCATGAACGCGTTATCCAGAAAGGAAAACCTGCTTCAGGTAGA
GCAGGTAGGGTACCTGACAGTCCCACCGCCAC back to topCoding sequence (CDS) from alignment at ch6:1954919..1956850+ >KJC3_008403-T1 ID=KJC3_008403-T1|Name=KJC3_008403-T1|organism=Aspergillus niger KJC3|type=CDS|length=1698bp|location=Sequence derived from alignment at ch6:1954919..1956850+ (Aspergillus niger KJC3)
ATGTCCATGAATGAATCTCACTCGGGTAGAGGACTAGGTTTTGCGATCAG
GACTCTGTTTCGCTCCTCCCCATCGCCCTCCCCGACTCCTACCCCGCGAC
ATCGAGTCTCTCTCCTCCGTCGAGGTCGGAGTATATTCTCCAACAGGAAC
CCTCGAAACCCGAGTAAACATTCGTCCGAGTTCCCAATGCATGACTTCCA
GCAAACTAACTCGGCTGCGATGGTGGGACTTGCCCAAGCGTCTGCAGGCG
ACAACTTTGACATCTTCCAATGGCACCCTCGATACCAAAACTGCCAGCGA
TACTTCCTAGATCATGCGCAACACAGCGATGCGGTCCAAGCACTTTCCGC
TTTTCTGAATATTCGTCTCCCATTTCAATGGCAATCGAACCCTGTCGTAA
ATTCTCACGCCGACCCATCACGATCCGCCGCTAGCCAATCCTCTGCATCC
TCACCTGCCTCGAATCTACCTCCGTCTGTTTCATTGATTCCATACATCCG
CCGCCTGGTGGCCACGGGAATGGATTTCCCTGGCGTGTTACATGGGTTTT
TCGGAGACGAATGGGGTGCGGGCATTGGACCTTTGCACGAGCAGGAACGG
CGCAATTACCTCTTCGCCGCGAAGAGTGGTGGTTGGGCGGCCGTGAAAAA
GGATTACGATATGCCTCCGCTCGAGACAATTCCGTTCCTACGTCCCTTAC
AGGGACCGCTAGATTCGGAGATTGAGGCGGCGGAGCGGAGTTGGAGCGAA
TGGCTTGCCATGGAAGACTGGATGGTTGGGCCTCGAGCGCCTGACATTCT
TCGAGACTCATCCTCACAAACTTCACGACATCACAGCTCACGAGGGTAAA
TGTCCATGAATGAATCTCACTCGGGTAGAGGACTAGGTTTTGCGATCAGG
ACTCTGTTTCGCTCCTCCCCATCGCCCTCCCCGACTCCTACCCCGCGACA
TCGAGTCTCTCTCCTCCGTCGAGGTCGGAGTATATTCTCCAACAGGAACC
CTCGAAACCCGAGTAAACATTCGTCCGAGTTCCCAATGCATGACTTCCAG
CAAACTAACTCGGCTGCGATGGTGGGACTTGCCCAAGCGTCTGCAGGCGA
CAACTTTGACATCTTCCAATGGCACCCTCGATACCAAAACTGCCAGCGAT
ACTTCCTAGATCATGCGCAACACAGCGATGCGGTCCAAGCACTTTCCGCT
TTTCTGAATATTCGTCTCCCATTTCAATGGCAATCGAACCCTGTCGTAAA
TTCTCACGCCGACCCATCACGATCCGCCGCTAGCCAATCCTCTGCATCCT
CACCTGCCTCGAATCTACCTCCGTCTGTTTCATTGATTCCATACATCCGC
CGCCTGGTGGCCACGGGAATGGATTTCCCTGGCGTGTTACATGGGTTTTT
CGGAGACGAATGGGGTGCGGGCATTGGACCTTTGCACGAGCAGGAACGGC
GCAATTACCTCTTCGCCGCGAAGAGTGGTGGTTGGGCGGCCGTGAAAAAG
GATTACGATATGCCTCCGCTCGAGACAATTCCGTTCCTACGTCCCTTACA
GGGACCGCTAGATTCGGAGATTGAGGCGGCGGAGCGGAGTTGGAGCGAAT
GGCTTGCCATGGAAGACTGGATGGTTGGGCCTCGAGCGCCTGACATTCTT
CGAGACTCATCCTCACAAACTTCACGACATCACAGCTCACGAGGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008403-T1.utr5p1 | KJC3_008403-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008403-T1.utr3p1 | KJC3_008403-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1954919..1956850 + |
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