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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:1976555..1977741- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008407-T1 ID=KJC3_008407-T1|Name=KJC3_008407-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1187bp|location=Sequence derived from alignment at ch6:1976555..1977741- (Aspergillus niger KJC3)
TCTCCAACACCACAATCCTGCCTCCGAACAGGGTCCCAACCGCCAGACAT
GGAAAAGCAAGAACTCCAGACATCGTTCCTCAGAAAATATTTCAAATCCT
CTACAAAACTCTCCCAGCTTCCCATCGAGGAACAGGTAGCCCTGTTCCGC
GAAGCGATCAGCCAAAATGCCACGTTGACCAAGATCCTCAGCCAAGCTTT
GGATTTAGACCTCCCCGAGTGGTACTTGGCCTCTGGATGCATTTTCCAAA
CGGTCTGGAATGTTTTGACCGGACGAGACCCCGAAGCCGGCATCGCGGAC
TATGACCTAGTCTACTACGACAAAAGCGATATCTCCTGGGCGGCAGAAGA
CGCTGCAATCCAAAAGGGCCAGAAGATATTTACGGGCGATAATAACAATA
ACAATAATTCCTCGTCTACTTCTACTACTACTACTACTACTACTACTACT
ACCCCCGTTGAGATCCGCAACCAGGCCCGCGTCCACCTGTGGTACAAGGA
AAACCGCGGAATCGACTGCCCACAACACGCGTCCGCAGAGGCCGCAATCG
CCACTTTCCCAACCACCACTGCCTCCCTGGGAGTCCGCTTACTGCCTAAC
GGGGATTGGCGCATCTTTGCCCCGCACGGCTTTGCGGACTTGTTTGATCT
GATCGTGCGCCCTAACCCGGTGCTTACGCCGCCGCATGTGTACAAGGCCA
AATCAGAGCGATGGCAGCGTCAGTGGCCGGGGCTTACCGTCTTGCCTTGG
CCGGAAGCGGAAGTGGAAAGCTCCGGGCAAGAAGAGGCAGGCGTGGGACT
TGCATCGGGAGTGTACATCGCTCCGCGGCTCGCACCTTGACGGCGCTTTT
CGCCTGCTTGGAGATACAAAGTACCTGTGAATAGCCGGCGCTTCCGAGGC
GGTTGCGAGCATTGAAAGTGGCTGTTGTGGAATTTGCTGCAGGAACTGCA
ATGCAGGGAGGGATGGAACCATGAAAGTATTTAGATTCTAGCCGCGGTGC
TATGCAAAAAGTAACCGATAGAGGTTTAGATCATGCATATGAGAGATGGG
AATGCGGTATAACAGCTGTTGACATCGCACAAAAACCCCAAGTGCCAGAT
TGACGCTTCCCAATATATCTTGATACAATTCCTCGTGTTTACTGAGCCTT
TTTAATACAGTAATATAAAATGTACATCGTCAAGGAT back to topCoding sequence (CDS) from alignment at ch6:1976555..1977741- >KJC3_008407-T1 ID=KJC3_008407-T1|Name=KJC3_008407-T1|organism=Aspergillus niger KJC3|type=CDS|length=792bp|location=Sequence derived from alignment at ch6:1976555..1977741- (Aspergillus niger KJC3)
ATGGAAAAGCAAGAACTCCAGACATCGTTCCTCAGAAAATATTTCAAATC
CTCTACAAAACTCTCCCAGCTTCCCATCGAGGAACAGGTAGCCCTGTTCC
GCGAAGCGATCAGCCAAAATGCCACGTTGACCAAGATCCTCAGCCAAGCT
TTGGATTTAGACCTCCCCGAGTGGTACTTGGCCTCTGGATGCATTTTCCA
AACGGTCTGGAATGTTTTGACCGGACGAGACCCCGAAGCCGGCATCGCGG
ACTATGACCTAGTCTACTACGACAAAAGCGATATCTCCTGGGCGGCAGAA
GACGCTGCAATCCAAAAGGGCCAGAAGATATTTACGGGCGATAATAACAA
TAACAATAATTCCTCGTCTACTTCTACTACTACTACTACTACTACTACTA
CTACCCCCGTTGAGATCCGCAACCAGGCCCGCGTCCACCTGTGGTACAAG
GAAAACCGCGGAATCGACTGCCCACAACACGCGTCCGCAGAGGCCGCAAT
CGCCACTTTCCCAACCACCACTGCCTCCCTGGGAGTCCGCTTACTGCCTA
ACGGGGATTGGCGCATCTTTGCCCCGCACGGCTTTGCGGACTTGTTTGAT
CTGATCGTGCGCCCTAACCCGGTGCTTACGCCGCCGCATGTGTACAAGGC
CAAATCAGAGCGATGGCAGCGTCAGTGGCCGGGGCTTACCGTCTTGCCTT
GGCCGGAAGCGGAAGTGGAAAGCTCCGGGCAAGAAGAGGCAGGCGTGGGA
CTTGCATCGGGAGTGTACATCGCTCCGCGGCTCGCACCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008407-T1.utr3p1 | KJC3_008407-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008407-T1.utr5p1 | KJC3_008407-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009267 |
| DBxref | PFAM:PF06042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:1976555..1977741 - |
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