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KJC3_008415-T1, KJC3_008415-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008415-T1
Unique NameKJC3_008415-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1996828..1998692-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008415-T1 ID=KJC3_008415-T1|Name=KJC3_008415-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1865bp|location=Sequence derived from alignment at ch6:1996828..1998692- (Aspergillus niger KJC3)
ACCAAATCTCGCCGTTTCTCCATCAACACATCGCCCTGGCCGCTGTCCCC
GCAATCTGGCCCTCTCCATTTAAGGTCTCGCGTCACTTCACGCTACTTCT
GGATGCGGCTTCTCTCCTTGATTTCCATTCCTGCCTGGACCGTCGCTCTC
TATCCTCTCTCTTCCCATTCTCTGTAGCCATGGGTATTCCGTGAGTCCAC
AATTTCTTACCCTACACAACTTTCGCCGCTGTCGGGATTCTACACGCGAC
TCCATCGGCCAAGAGCGCACGGAACGGCTGTCATATCTGACTGACATGAC
GCAGACTGTTTTGCGAGTCCTCCGCAGATGCTCCGAAGAACAATGCTGTC
AAAGACCCATGTGCCGCTGCGCGCTCCGCAATTCGTCGCCAGGCTACTAT
TCGTCGTCCCTCGCGCTATGGCGGCTCCGCGTTGCGCAGCGCAACTCTCC
GGTCGCCTTTCCCTCGTCCGCTAGCAGATGAGATTGAGCGTGAGGCGAAT
GGTCTTCAGCGTCATGTGCGATCTCCGCTTTCGAATTCTAGCAGCGCCGA
CGACCCGTTCGACCTGGCCCGCGGCCTCCTGGATTCCGATAGACGCGAAG
CCGGCCAGCGACTGCTGAGCGATGCGCTCCGTCATGGGCGGCCTGGTCAG
CGATTGAGGATACCGCGCAGCTCGGCCCTGCCCGATCTATACAACCGTCC
ATCGCCGGGTGATGACACGACAAACAGGCTTGACCAGACTCATCCCCAGT
TAACACCGCGTTTTGCTCCTGCGATTGCATACCATAGGACTGCGTCTCCA
CAAGCGCGCCCAGAAGCTGCTCGGCTATCTCCATACCTTCGACCAGATGG
CCTTGGAGGTGATCTTTCGATCTCAGCGGGCTTCCCTACACTGCGACGTG
TCGGTGAACGATCGATCAATGAGGCGAATCGTCCCAACCGCGAGTCGGCT
ATTGATGGACTTGGCGACCGACAGAGAAGCCTGAGTCCAGATGACGACCA
TGCTAACGATGCATGGGAGACTCTCCTTACTACGATCACGCCGGATACCA
ATCTTCCGAGTGCCGATTCGTCCTTCACTTCCGCATCTGCATCTGGAACG
AATGCGTCGACAATCGGGACTTCCAGAAGTTCGGCAACCTCGCTGCAGAG
TCTGCCGAACCCTATGGACTCGAGCACGGGCACTGTACAGATGGTCCTAG
ATCCATACCCTGAGTTTCTAAACCCCTGTGACTATTCAAGCTCCAGTGAT
TCCGACAGCGACTCCGAAACCGGGATCTCTGGAAACGCATTGTTCCGTCG
CTACCGTCGTGTTCGCCAGATGGAGTCGCTGAGACGGGCTCAGCATCTCC
AGTCAACCATGAGCAACCACCCTCCTATCCCTACCATCTCCTTTGCATTT
TCCGATTCTTCTTCTACCTCTACCGATCCAGACCTGCAGCAGATGCAAGC
CATCTTAGATCGACTTGCGCGTCGCGAGGATATCCCAGAAGAATGGTGGG
CGGCAGCTGGACTGTCCCGCACCCTTGGCCGCCGGCTCGGCGCGAACGAT
GACACTAACGACACTGATAGCGTGGATGGACCGCTCAGGTCGAGGTGATC
ATATACCTTTCTGTCACTGTGTTAGATATCGAGTGTTTAGTTATTAGGTC
ATCTGGGGATGCTTGTGGTTTCGAGTTGTTCTTAGCGGGGGTTTCTTGTT
TGGCGTTATGGTGTCGCAGCCAGGGTCAGTCGGCTGAATAAGTTATGGAC
AGGAATTTCCCATTATGAGGTGGAATTGATCTGAAGTGCATATTCGGGCA
CCTATTGTACTCATATATCCTGGCTTGTCTAATGTCATTTGGTGTGAATC
AAACCTGTGTGTCGG
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Coding sequence (CDS) from alignment at ch6:1996828..1998692-

>KJC3_008415-T1 ID=KJC3_008415-T1|Name=KJC3_008415-T1|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch6:1996828..1998692- (Aspergillus niger KJC3)
ACTGTTTTGCGAGTCCTCCGCAGATGCTCCGAAGAACAATGCTGTCAAAG
ACCCATGTGCCGCTGCGCGCTCCGCAATTCGTCGCCAGGCTACTATTCGT
CGTCCCTCGCGCTATGGCGGCTCCGCGTTGCGCAGCGCAACTCTCCGGTC
GCCTTTCCCTCGTCCGCTAGCAGATGAGATTGAGCGTGAGGCGAATGGTC
TTCAGCGTCATGTGCGATCTCCGCTTTCGAATTCTAGCAGCGCCGACGAC
CCGTTCGACCTGGCCCGCGGCCTCCTGGATTCCGATAGACGCGAAGCCGG
CCAGCGACTGCTGAGCGATGCGCTCCGTCATGGGCGGCCTGGTCAGCGAT
TGAGGATACCGCGCAGCTCGGCCCTGCCCGATCTATACAACCGTCCATCG
CCGGGTGATGACACGACAAACAGGCTTGACCAGACTCATCCCCAGTTAAC
ACCGCGTTTTGCTCCTGCGATTGCATACCATAGGACTGCGTCTCCACAAG
CGCGCCCAGAAGCTGCTCGGCTATCTCCATACCTTCGACCAGATGGCCTT
GGAGGTGATCTTTCGATCTCAGCGGGCTTCCCTACACTGCGACGTGTCGG
TGAACGATCGATCAATGAGGCGAATCGTCCCAACCGCGAGTCGGCTATTG
ATGGACTTGGCGACCGACAGAGAAGCCTGAGTCCAGATGACGACCATGCT
AACGATGCATGGGAGACTCTCCTTACTACGATCACGCCGGATACCAATCT
TCCGAGTGCCGATTCGTCCTTCACTTCCGCATCTGCATCTGGAACGAATG
CGTCGACAATCGGGACTTCCAGAAGTTCGGCAACCTCGCTGCAGAGTCTG
CCGAACCCTATGGACTCGAGCACGGGCACTGTACAGATGGTCCTAGATCC
ATACCCTGAGTTTCTAAACCCCTGTGACTATTCAAGCTCCAGTGATTCCG
ACAGCGACTCCGAAACCGGGATCTCTGGAAACGCATTGTTCCGTCGCTAC
CGTCGTGTTCGCCAGATGGAGTCGCTGAGACGGGCTCAGCATCTCCAGTC
AACCATGAGCAACCACCCTCCTATCCCTACCATCTCCTTTGCATTTTCCG
ATTCTTCTTCTACCTCTACCGATCCAGACCTGCAGCAGATGCAAGCCATC
TTAGATCGACTTGCGCGTCGCGAGGATATCCCAGAAGAATGGTGGGCGGC
AGCTGGACTGTCCCGCACCCTTGGCCGCCGGCTCGGCGCGAACGATGACA
CTAACGACACTGATAGCGTGGATGGACCGCTCAGGTCGAGGTGAATGGGT
ATTCCACTGTTTTGCGAGTCCTCCGCAGATGCTCCGAAGAACAATGCTGT
CAAAGACCCATGTGCCGCTGCGCGCTCCGCAATTCGTCGCCAGGCTACTA
TTCGTCGTCCCTCGCGCTATGGCGGCTCCGCGTTGCGCAGCGCAACTCTC
CGGTCGCCTTTCCCTCGTCCGCTAGCAGATGAGATTGAGCGTGAGGCGAA
TGGTCTTCAGCGTCATGTGCGATCTCCGCTTTCGAATTCTAGCAGCGCCG
ACGACCCGTTCGACCTGGCCCGCGGCCTCCTGGATTCCGATAGACGCGAA
GCCGGCCAGCGACTGCTGAGCGATGCGCTCCGTCATGGGCGGCCTGGTCA
GCGATTGAGGATACCGCGCAGCTCGGCCCTGCCCGATCTATACAACCGTC
CATCGCCGGGTGATGACACGACAAACAGGCTTGACCAGACTCATCCCCAG
TTAACACCGCGTTTTGCTCCTGCGATTGCATACCATAGGACTGCGTCTCC
ACAAGCGCGCCCAGAAGCTGCTCGGCTATCTCCATACCTTCGACCAGATG
GCCTTGGAGGTGATCTTTCGATCTCAGCGGGCTTCCCTACACTGCGACGT
GTCGGTGAACGATCGATCAATGAGGCGAATCGTCCCAACCGCGAGTCGGC
TATTGATGGACTTGGCGACCGACAGAGAAGCCTGAGTCCAGATGACGACC
ATGCTAACGATGCATGGGAGACTCTCCTTACTACGATCACGCCGGATACC
AATCTTCCGAGTGCCGATTCGTCCTTCACTTCCGCATCTGCATCTGGAAC
GAATGCGTCGACAATCGGGACTTCCAGAAGTTCGGCAACCTCGCTGCAGA
GTCTGCCGAACCCTATGGACTCGAGCACGGGCACTGTACAGATGGTCCTA
GATCCATACCCTGAGTTTCTAAACCCCTGTGACTATTCAAGCTCCAGTGA
TTCCGACAGCGACTCCGAAACCGGGATCTCTGGAAACGCATTGTTCCGTC
GCTACCGTCGTGTTCGCCAGATGGAGTCGCTGAGACGGGCTCAGCATCTC
CAGTCAACCATGAGCAACCACCCTCCTATCCCTACCATCTCCTTTGCATT
TTCCGATTCTTCTTCTACCTCTACCGATCCAGACCTGCAGCAGATGCAAG
CCATCTTAGATCGACTTGCGCGTCGCGAGGATATCCCAGAAGAATGGTGG
GCGGCAGCTGGACTGTCCCGCACCCTTGGCCGCCGGCTCGGCGCGAACGA
TGACACTAACGACACTGATAGCGTGGATGGACCGCTCAGGTCGAGGTGAA
TGGGTATTCC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008415KJC3_008415Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008415-T1KJC3_008415-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008415-T1.cdsKJC3_008415-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008415-T1.utr3p1KJC3_008415-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008415-T1.exon2KJC3_008415-T1.exon2Aspergillus niger KJC3exon
KJC3_008415-T1.exon1KJC3_008415-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008415-T1.utr5p1KJC3_008415-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.13
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1996828..1998692 -
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