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KJC3_008421-T1, KJC3_008421-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008421-T1
Unique NameKJC3_008421-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2016561..2018220-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008421-T1 ID=KJC3_008421-T1|Name=KJC3_008421-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1660bp|location=Sequence derived from alignment at ch6:2016561..2018220- (Aspergillus niger KJC3)
CAGCATAACTCCTAATCCACCCACCGGTTCGCTTTAACGTCATACCCTAT
CTCCGAGGCCGGCTCCGCGGAGGCAACGGGGTTTCTCGAAATCGCCTAGC
GCCGGTGAATAAGACGGCCTTAGTCAAGTTTCCCCCCCCCAAAGAAACCA
TAATTAATCAATCGCAACTATCAATCTTTCATCACATCCAACTCTTCCCA
AACTAACTAACCACCCAACCCCGACCTCACCACTCACCTATTCTTTTCCA
TCATCAATCTACTGTCTAATCAATACCTTACTTTCCTCTTAATATCTCAC
ACACATCACATACACAATGTTCCGTCGTCTAGTAACAGTTGTCCCTCGCT
CCGGCGTCCTTTCGCCTCGCAGCGTCACCCCGGCCGTCTCCGGAATCCAG
CAAGCCGTGAGGTCGACCGTCGTTGCTCCTCAGCAGCAGCAGCGCAGAGG
ATACCATGAGAAAGATATGTTTATTCCCCCTCCCCTTTTCATCATGTTGA
AAAACCGAAGAAAATGCTGACCATCCCTGCACTGTTGGACCACTACTCCA
ACCCAAGTAGGTAGCTTCCTGCATCCATCCCTCTCGACAACATCACGTCG
CATCAAAATATACAACACGCAGCGCTTGCAAATCACGCTCACCAGACATA
TACGAACAAACGTGAAAATGAATACTAACGAGCATCCCTGTAGGAAACGT
CGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCGGCGCCC
CGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAGGACAGC
AACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAGCGCTAT
TGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCCTCGACG
AGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGCTTGCCC
CCTGTTAAGCGTATGTTTATCCCTTGCTACTGTGGAGACGAGAGGATTGG
AAGAAATCGGGGGAGAAATGATAAAGCTAACATATTCTGATAGTGCACTG
CTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTACA
CCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCT
ATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTA
AGTCTTTTCTCTAGCTTTTACGAACGAGTGAAAAATCTGAAAAACCAAAA
ATATACGGAGCAAAAATGGATACGGATACGGATACAGATACCATGATTGA
TTCCCGATTAAGAGTGCTGGAGAGAAGAGCAAAGCAGAATGATACAATGG
AGATGAGATGAGTTGCGATGTGAACTGTATGGATTTGGCCTATGGTGGTG
TGGAGTGAATGGAATGGCCTGGGTCGAATATGTGATTCCCCCAAAATATC
TTGTTGCTTGTCAGTCTGGATTGGATGGACTGTTTTTTTCCCTTTGTTTA
TTAAATGGTGTATAGCATTTCATTATTCTTTTCCCACATGATGTTTTTCT
TTTCTTTCTGCATTTCATTTCCAGCAAGGCAACTAAAGAAGGGATTATCC
GGATATATACAACAACAATCACAGTAGTAACACAATATAATGTATTTCTC
TCTCTCTATA
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Coding sequence (CDS) from alignment at ch6:2016561..2018220-

>KJC3_008421-T1 ID=KJC3_008421-T1|Name=KJC3_008421-T1|organism=Aspergillus niger KJC3|type=CDS|length=2388bp|location=Sequence derived from alignment at ch6:2016561..2018220- (Aspergillus niger KJC3)
TGCACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGAT
TACTACACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGG
TGCTTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAA
CTGCTTAAGAAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCG
GACTCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGC
GTCGACAAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGG
TTGCGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTG
GAATGACCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAG
GAGTTGTGCTTGCCCCCTGTTAAGCTGTTGGACCACTACTCCAACCCAAA
TGTTCCGTCGTCTAGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCCT
CGCAGCGTCACCCCGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGAC
CGTCGTTGCTCCTCAGCAGCAGCAGCGCAGAGGATACCATGAGAAAGTGC
ACTGCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTAC
TACACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGC
TTCTATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTG
CTTAAGAAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGAC
TCGTCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTC
GACAAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTG
CGGTAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAA
TGACCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAG
TTGTGCTTGCCCCCTGTTAAGCTGTTGGACCACTACTCCAACCCAAATGT
TCCGTCGTCTAGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCCTCGC
AGCGTCACCCCGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGACCGT
CGTTGCTCCTCAGCAGCAGCAGCGCAGAGGATACCATGAGAAAGTGCACT
GCTCCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTAC
ACCAAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTC
TATCCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTT
AAGAAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGACTCG
TCGGCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGAC
AAGGACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGG
TAGCGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGA
CCCTCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTG
TGCTTGCCCCCTGTTAAGCTGTTGGACCACTACTCCAACCCAAATGTTCC
GTCGTCTAGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCCTCGCAGC
GTCACCCCGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGACCGTCGT
TGCTCCTCAGCAGCAGCAGCGCAGAGGATACCATGAGAAAGTGCACTGCT
CCATGCTTGCCGAAGACGCCATCAAGTCCGCCATCTCGGATTACTACACC
AAGAACCCTCGCACCGTGAAGACCGATCTGTCCGGCACGGGTGCTTCTAT
CCCGGAAGTGCAGGTGGAGGTTGAGAAGACCAGCAGCGCAACTGCTTAAG
AAACGTCGGCTCCATGGCCAAGTCGATGGACGTTGGTACCGGACTCGTCG
GCGCCCCGGCCTGTGGCGATGTCATGAAACTCCAGATCCGCGTCGACAAG
GACAGCAACAAGATTAGCGACGTCAAGTTCAAGACTTTCGGTTGCGGTAG
CGCTATTGCCAGCTCGAGTTATCTGACTGAGCTGGTCCGTGGAATGACCC
TCGACGAGGCCGCTAAGATCCGTAACACCGATATCGCCAAGGAGTTGTGC
TTGCCCCCTGTTAAGCTGTTGGACCACTACTCCAACCCAAATGTTCCGTC
GTCTAGTAACAGTTGTCCCTCGCTCCGGCGTCCTTTCGCCTCGCAGCGTC
ACCCCGGCCGTCTCCGGAATCCAGCAAGCCGTGAGGTCGACCGTCGTTGC
TCCTCAGCAGCAGCAGCGCAGAGGATACCATGAGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ISU1KJC3_008421Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008421-T1KJC3_008421-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008421-T1.cdsKJC3_008421-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008421-T1.utr3p1KJC3_008421-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008421-T1.exon4KJC3_008421-T1.exon4Aspergillus niger KJC3exon
KJC3_008421-T1.exon3KJC3_008421-T1.exon3Aspergillus niger KJC3exon
KJC3_008421-T1.exon2KJC3_008421-T1.exon2Aspergillus niger KJC3exon
KJC3_008421-T1.exon1KJC3_008421-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008421-T1.utr5p1KJC3_008421-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.13
DBxrefInterPro:IPR011339
DBxrefInterPro:IPR002871
DBxrefPFAM:PF01592
Productiron-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2016561..2018220 -
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