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KJC3_008424-T1, KJC3_008424-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008424-T1
Unique NameKJC3_008424-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2022274..2023387+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008424-T1 ID=KJC3_008424-T1|Name=KJC3_008424-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1114bp|location=Sequence derived from alignment at ch6:2022274..2023387+ (Aspergillus niger KJC3)
GCTTGACTGACATTTCGCGATCCTCCCCCTCCACACCACCCCGTCAATTG
GACCCGAACAACCCCGCTGGGATCAATCACCATGTCCGCTCCCTCCCTCG
CCAGCTACATCGTCAAGCGCCCCTTCCTCAAGCGCTGGATGATGCCCATT
GCCCAGTGGTACACCGATGCCTCTGGCTACAGGAGACTCGGCTTGAAGTA
GGCGATCCCCTTGCCCTCATGGGTGGTTTCCCGGACCAACATCAGCGACT
ACGAATCAATGGAAGAGACAATGGATAGATTTCAATTGCGGGAGATATAC
AATAAGCATCCTCCACTTGATTATCCATATCATGTTCCTGCCGTCGCCCG
CTGGTCCGGGCATTACGAACCAACCCGTAATCATACCTCCATTGCAGCAT
CAACTAACAATCAAACCAGGGCTGATGACCTGATCCCCGAGGAGAACGAC
GTCGTTCAGAAGGCCCTCAAGCGTCTCCCTCCCAAGGAGGCCTACGACCG
TATCTTCCGCATCCGCAGAGCATTCCAGGTCCGTCCTCACACCGAACTCC
AACCACAGAAGAACGTAAAACTAACATAATATGCGCGAAACAGTGCTCCA
TCTCCCACACCCTCCTTCCCGCTGCTGAGCAGACCAAGCCCGAGGAGGTG
AGTCGATTTCCGCGTTCTTCAATCCGTCAATTGTCCGTTCAGTTTCTCCG
CAAAAACGCATCGGCCAATCCCGTGAGCGGGATTTGTAACCCACCTGGGT
TACTCCATATCGATGCTTATGGTGACTGGACTTGATATATTGATGTCCCT
GATATATTATTTGACGCGTTTAAGACCATATTCGTGTCGTGGATGCTAAC
TGTCATCGTCCCCAGGATGTCGAGTACCTGAGCCCCATCATCCGCGAGAT
CGAGAAGGAGAAGCAGGAGCGTGAAGACCTCGACGCCCTTGTCGTCAGAC
GGTAGATTATGTCTCTGGCTTCGCTGAACTAGATTACTTTTGTTACGGTA
TACAAAAATGCCGCTGGGGTTTTATAGACGGGCGGGAATACTAAGTATCA
GAGAGAACTTGCTGTCCCGGCTCGGCTCGGCGGGCATGCTGCGAAGAAGA
GAGGGAAGGGAGAG
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Coding sequence (CDS) from alignment at ch6:2022274..2023387+

>KJC3_008424-T1 ID=KJC3_008424-T1|Name=KJC3_008424-T1|organism=Aspergillus niger KJC3|type=CDS|length=1476bp|location=Sequence derived from alignment at ch6:2022274..2023387+ (Aspergillus niger KJC3)
ATGTCCGCTCCCTCCCTCGCCAGCTACATCGTCAAGCGCCCCTTCCTCAA
GCGCTGGATGATGCCCATTGCCCAGTGGTACACCGATGCCTCTGGCTACA
GGAGACTCGGCTTGAAGGCTGATGACCTGATCCCCGAGGAGAACGACGTC
GTTCAGAAGGCCCTCAAGCGTCTCCCTCCCAAGGAGGCCTACGACCGTAT
CTTCCGCATCCGCAGAGCATTCCAGTGCTCCATCTCCCACACCCTCCTTC
CCGCTGCTGAGCAGACCAAGCCCGAGGAGGATGTCGAGTACCTGAGCCCC
ATCATCCGCGAGATCGAGAAGGAGAAGCAGGAGCGTGAAGACCTCGACGC
CCTTGTCGTCAGACGGTAGATGTCCGCTCCCTCCCTCGCCAGCTACATCG
TCAAGCGCCCCTTCCTCAAGCGCTGGATGATGCCCATTGCCCAGTGGTAC
ACCGATGCCTCTGGCTACAGGAGACTCGGCTTGAAGGCTGATGACCTGAT
CCCCGAGGAGAACGACGTCGTTCAGAAGGCCCTCAAGCGTCTCCCTCCCA
AGGAGGCCTACGACCGTATCTTCCGCATCCGCAGAGCATTCCAGTGCTCC
ATCTCCCACACCCTCCTTCCCGCTGCTGAGCAGACCAAGCCCGAGGAGGA
TGTCGAGTACCTGAGCCCCATCATCCGCGAGATCGAGAAGGAGAAGCAGG
AGCGTGAAGACCTCGACGCCCTTGTCGTCAGACGGTAGATGTCCGCTCCC
TCCCTCGCCAGCTACATCGTCAAGCGCCCCTTCCTCAAGCGCTGGATGAT
GCCCATTGCCCAGTGGTACACCGATGCCTCTGGCTACAGGAGACTCGGCT
TGAAGGCTGATGACCTGATCCCCGAGGAGAACGACGTCGTTCAGAAGGCC
CTCAAGCGTCTCCCTCCCAAGGAGGCCTACGACCGTATCTTCCGCATCCG
CAGAGCATTCCAGTGCTCCATCTCCCACACCCTCCTTCCCGCTGCTGAGC
AGACCAAGCCCGAGGAGGATGTCGAGTACCTGAGCCCCATCATCCGCGAG
ATCGAGAAGGAGAAGCAGGAGCGTGAAGACCTCGACGCCCTTGTCGTCAG
ACGGTAGATGTCCGCTCCCTCCCTCGCCAGCTACATCGTCAAGCGCCCCT
TCCTCAAGCGCTGGATGATGCCCATTGCCCAGTGGTACACCGATGCCTCT
GGCTACAGGAGACTCGGCTTGAAGGCTGATGACCTGATCCCCGAGGAGAA
CGACGTCGTTCAGAAGGCCCTCAAGCGTCTCCCTCCCAAGGAGGCCTACG
ACCGTATCTTCCGCATCCGCAGAGCATTCCAGTGCTCCATCTCCCACACC
CTCCTTCCCGCTGCTGAGCAGACCAAGCCCGAGGAGGATGTCGAGTACCT
GAGCCCCATCATCCGCGAGATCGAGAAGGAGAAGCAGGAGCGTGAAGACC
TCGACGCCCTTGTCGTCAGACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005750mitochondrial respiratory chain complex III
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008424KJC3_008424Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008424-T1KJC3_008424-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008424-T1.utr5p1KJC3_008424-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008424-T1.exon1KJC3_008424-T1.exon1Aspergillus niger KJC3exon
KJC3_008424-T1.exon2KJC3_008424-T1.exon2Aspergillus niger KJC3exon
KJC3_008424-T1.exon3KJC3_008424-T1.exon3Aspergillus niger KJC3exon
KJC3_008424-T1.exon4KJC3_008424-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008424-T1.cdsKJC3_008424-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008424-T1.utr3p1KJC3_008424-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.13
NoteBUSCO:EOG09265G9U
DBxrefInterPro:IPR036544
DBxrefInterPro:IPR003197
DBxrefPFAM:PF02271
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2022274..2023387 +
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