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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2022779..2025465- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008425-T1 ID=KJC3_008425-T1|Name=KJC3_008425-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2687bp|location=Sequence derived from alignment at ch6:2022779..2025465- (Aspergillus niger KJC3)
TCATGATCCACAATAAACTCTGAATTTCATTTTCTAGACTAATCATATCC
ATAACCCATGATTCTGCAGGTTTACTATGTTACTCAACATACGGCGTGTC
TAACCACGGAATGTCATATGACACCATAACTGACTGAAGACCTCAAACTG
AAGCGAGGATGTTTCACACCTCTCAAATGCGGGGGATGAGAGACCACCAT
TCATGCAGAGAAAACCGCAACAAGAAGCGGTATGGAAACCAGGCAGACAA
AGAAAGAGGAAATCAACCATGGTTGATATCATTGATTGCTAAGACAGCTG
CTCGTGACTTCCCGAGCTTATGTACTCCATCCTCATCATAGTACTCCAAC
AACACTAACCGCCATGACTGGTCCATACTACCTACAAACAGCAACAGCGA
TAATATACTTACCCCAATTACTCTTAAATCATCTATATTCTTAACTAGAG
TACACACTGCTGAGAAGCGACTGATTCAATGATGACCCTGCGACGCTCCG
CTCGTCTAACTGCAGCGTCAGTGTCCAAGAACAACAGCACCACCACCACT
GTCCCACATCTGCAACCCAAAACTCAAACAAAGAGAGCAGCCAGCAGAAC
TACAAACGGTGTCTCAAAGACACGAAAGCCTGCTGCAGCGGCAGCAAGGG
GCAAGAAAGCGCAGCTAAATGCGATTCTCAAACTTGACCAAGCTCCTCCC
CTCACAGATTCACCAACATCATCATCATCATCATCATCATCATCACGCTC
AAACAACAGCAGACAATCACCCAATACTACTACTACAGCCACTACTAACA
ACATCTGGGACCCCATCCCCACCCCCACAGTTCACACCTCCAGCAGCAGA
ACGACCCCTCCCCCGCTCGATCGACCGGTCGAACCGCACCACACCAACGC
AACGCTCCTCACCCCCCATGGCTCATCGCTAGTTGCATACCCCCCGGGCA
CAGATGCGGACGCATCACCAAGCAAGACAGGCCGGCCCCGTCCCACCGCC
ACAACAGGCACGCTTCTCGAGAAAGCAGCCGCACACCTGATCGCCACGGA
TCCGCGTCTCGGATCGCTCATCCGCGAACAGCCCTGTCCGTTGTTCACGC
CCGAGGGCCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTTGTTAGTAGT
ATCATTGGACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTAAGGATAA
GTTTGTGGCGTTGTTCAAGACAAATAATAAGGATGAGGATGGTACGAGAC
CGAGCTTCTTCCCTACCCCGGAGGAAATCATCAAGATGGATATCAGCACG
CTCCGGACAGCAGGTCTGTCCCAGCGCAAGGCGGAATACATACATGGGTT
ATCGGAGAAGTTTGCCAACGGGGAACTGAGCGCCCGGATGTTATTGAATG
CTAGTGACGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGGGGCTTGGGC
AAATGGTCTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGATAGATGT
GTTTTCTACGGGTGATTTGGGTGTACAGTATGTGATTATCTGTGGGTGAA
TTGGGTAGATGCTGACTTGTGTTGTTGCAGGAGAGGTTGTGCGGTGTTTG
TGGGCAAGGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAG
TATATGCCTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTA
TAGGTATGTGATGCCCGTTGATGTATGTCCTTGTGGGCTTGTTGTCTGAC
ATCCGTACTAGGAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGT
TAATATTGCTGTGTTGGGTGGGTAGATTACGACTATATACAGACAGGATA
TAGAACCAGACGTCCGATAGGTATAGTGTGTAGAGCTACTATATGTACAT
TACACAGGAGGTGGGAACGTATATAGGTTCTATACCGGGCATGTATCATG
AACCACGCATAAGCTGAAAGCTACAAGCCAACTAGAGAACGATGACGAGT
GAATTTGTACAGTATCAGTACACGTGATTGAGCACCATAAATCAAAAGCT
TCAATTAACAACCAGCCAAATGCTCTCTCTCTCCCTTCCCTCTCTTCTTC
GCAGCATGCCCGCCGAGCCGAGCCGGGACAGCAAGTTCTCTCTGATACTT
AGTATTCCCGCCCGTCTATAAAACCCCAGCGGCATTTTTGTATACCGTAA
CAAAAGTAATCTAGTTCAGCGAAGCCAGAGACATAATCTACCGTCTGACG
ACAAGGGCGTCGAGGTCTTCACGCTCCTGCTTCTCCTTCTCGATCTCGCG
GATGATGGGGCTCAGGTACTCGACATCCTGGGGACGATGACAGTTAGCAT
CCACGACACGAATATGGTCTTAAACGCGTCAAATAATATATCAGGGACAT
CAATATATCAAGTCCAGTCACCATAAGCATCGATATGGAGTAACCCAGGT
GGGTTACAAATCCCGCTCACGGGATTGGCCGATGCGTTTTTGCGGAGAAA
CTGAACGGACAATTGACGGATTGAAGAACGCGGAAATCGACTCACCTCCT
CGGGCTTGGTCTGCTCAGCAGCGGGAAGGAGGGTGTGGGAGATGGAGCAC
TGTTTCGCGCATATTATGTTAGTTTTACGTTCTTCTGTGGTTGGAGTTCG
GTGTGAGGACGGACCTGGAATGCTCTGCGGATGCGGA back to topCoding sequence (CDS) from alignment at ch6:2022779..2025465- >KJC3_008425-T1 ID=KJC3_008425-T1|Name=KJC3_008425-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch6:2022779..2025465- (Aspergillus niger KJC3)
GAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGTTAATATTGCTG
TGTTGGGTGGGTAGGAGAGGTTGTGCGGTGTTTGTGGGCAAGGATGTAAA
CAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAGTATATGCCTGAAAAAG
ATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTATAGATGATGACCCTGC
GACGCTCCGCTCGTCTAACTGCAGCGTCAGTGTCCAAGAACAACAGCACC
ACCACCACTGTCCCACATCTGCAACCCAAAACTCAAACAAAGAGAGCAGC
CAGCAGAACTACAAACGGTGTCTCAAAGACACGAAAGCCTGCTGCAGCGG
CAGCAAGGGGCAAGAAAGCGCAGCTAAATGCGATTCTCAAACTTGACCAA
GCTCCTCCCCTCACAGATTCACCAACATCATCATCATCATCATCATCATC
ATCACGCTCAAACAACAGCAGACAATCACCCAATACTACTACTACAGCCA
CTACTAACAACATCTGGGACCCCATCCCCACCCCCACAGTTCACACCTCC
AGCAGCAGAACGACCCCTCCCCCGCTCGATCGACCGGTCGAACCGCACCA
CACCAACGCAACGCTCCTCACCCCCCATGGCTCATCGCTAGTTGCATACC
CCCCGGGCACAGATGCGGACGCATCACCAAGCAAGACAGGCCGGCCCCGT
CCCACCGCCACAACAGGCACGCTTCTCGAGAAAGCAGCCGCACACCTGAT
CGCCACGGATCCGCGTCTCGGATCGCTCATCCGCGAACAGCCCTGTCCGT
TGTTCACGCCCGAGGGCCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTT
GTTAGTAGTATCATTGGACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGAT
TAAGGATAAGTTTGTGGCGTTGTTCAAGACAAATAATAAGGATGAGGATG
GTACGAGACCGAGCTTCTTCCCTACCCCGGAGGAAATCATCAAGATGGAT
ATCAGCACGCTCCGGACAGCAGGTCTGTCCCAGCGCAAGGCGGAATACAT
ACATGGGTTATCGGAGAAGTTTGCCAACGGGGAACTGAGCGCCCGGATGT
TATTGAATGCTAGTGACGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGG
GGCTTGGGCAAATGGTCTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCG
GATAGATGTGTTTTCTACGGGTGATTTGGGTGTACAGAGCTTGTTCATGT
GGTATATGTGGCGGGTGACGGATGTTAATATTGCTGTGTTGGGTGGGTAG
GAGAGGTTGTGCGGTGTTTGTGGGCAAGGATGTAAACAAGTTGAAGGGGA
AGGGCGGCGGTAAGTTCAAGTATATGCCTGAAAAAGATATGTTGGAGCTG
GCGGCGAAGTTTGCTCCGTATAGATGATGACCCTGCGACGCTCCGCTCGT
CTAACTGCAGCGTCAGTGTCCAAGAACAACAGCACCACCACCACTGTCCC
ACATCTGCAACCCAAAACTCAAACAAAGAGAGCAGCCAGCAGAACTACAA
ACGGTGTCTCAAAGACACGAAAGCCTGCTGCAGCGGCAGCAAGGGGCAAG
AAAGCGCAGCTAAATGCGATTCTCAAACTTGACCAAGCTCCTCCCCTCAC
AGATTCACCAACATCATCATCATCATCATCATCATCATCACGCTCAAACA
ACAGCAGACAATCACCCAATACTACTACTACAGCCACTACTAACAACATC
TGGGACCCCATCCCCACCCCCACAGTTCACACCTCCAGCAGCAGAACGAC
CCCTCCCCCGCTCGATCGACCGGTCGAACCGCACCACACCAACGCAACGC
TCCTCACCCCCCATGGCTCATCGCTAGTTGCATACCCCCCGGGCACAGAT
GCGGACGCATCACCAAGCAAGACAGGCCGGCCCCGTCCCACCGCCACAAC
AGGCACGCTTCTCGAGAAAGCAGCCGCACACCTGATCGCCACGGATCCGC
GTCTCGGATCGCTCATCCGCGAACAGCCCTGTCCGTTGTTCACGCCCGAG
GGCCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTTGTTAGTAGTATCAT
TGGACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTAAGGATAAGTTTG
TGGCGTTGTTCAAGACAAATAATAAGGATGAGGATGGTACGAGACCGAGC
TTCTTCCCTACCCCGGAGGAAATCATCAAGATGGATATCAGCACGCTCCG
GACAGCAGGTCTGTCCCAGCGCAAGGCGGAATACATACATGGGTTATCGG
AGAAGTTTGCCAACGGGGAACTGAGCGCCCGGATGTTATTGAATGCTAGT
GACGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGGGGCTTGGGCAAATG
GTCTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGATAGATGTGTTTT
CTACGGGTGATTTGGGTGTACAGAGCTTGTTCATGTGGTATATGTGGCGG
GTGACGGATGTTAATATTGCTGTGTTGGGTGGGTAGGAGAGGTTGTGCGG
TGTTTGTGGGCAAGGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAG
TTCAAGTATATGCCTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGC
TCCGTATAGATGATGACCCTGCGACGCTCCGCTCGTCTAACTGCAGCGTC
AGTGTCCAAGAACAACAGCACCACCACCACTGTCCCACATCTGCAACCCA
AAACTCAAACAAAGAGAGCAGCCAGCAGAACTACAAACGGTGTCTCAAAG
ACACGAAAGCCTGCTGCAGCGGCAGCAAGGGGCAAGAAAGCGCAGCTAAA
TGCGATTCTCAAACTTGACCAAGCTCCTCCCCTCACAGATTCACCAACAT
CATCATCATCATCATCATCATCATCACGCTCAAACAACAGCAGACAATCA
CCCAATACTACTACTACAGCCACTACTAACAACATCTGGGACCCCATCCC
CACCCCCACAGTTCACACCTCCAGCAGCAGAACGACCCCTCCCCCGCTCG
ATCGACCGGTCGAACCGCACCACACCAACGCAACGCTCCTCACCCCCCAT
GGCTCATCGCTAGTTGCATACCCCCCGGGCACAGATGCGGACGCATCACC
AAGCAAGACAGGCCGGCCCCGTCCCACCGCCACAACAGGCACGCTTCTCG
AGAAAGCAGCCGCACACCTGATCGCCACGGATCCGCGTCTCGGATCGCTC
ATCCGCGAACAGCCCTGTCCGTTGTTCACGCCCGAGGGCCTAGCCGAGGA
GATCGACCCGTTTCGGAGCCTTGTTAGTAGTATCATTGGACAGCAGGTGT
CAGGAGCAGCGGCGAAGTCGATTAAGGATAAGTTTGTGGCGTTGTTCAAG
ACAAATAATAAGGATGAGGATGGTACGAGACCGAGCTTCTTCCCTACCCC
GGAGGAAATCATCAAGATGGATATCAGCACGCTCCGGACAGCAGGTCTGT
CCCAGCGCAAGGCGGAATACATACATGGGTTATCGGAGAAGTTTGCCAAC
GGGGAACTGAGCGCCCGGATGTTATTGAATGCTAGTGACGAGGAACTCGT
TGAGAAGTTGACTGCTGTGCGGGGCTTGGGCAAATGGTCTGTTGAGATGT
TTGCTTGTTTTGCTCTGAAGCGGATAGATGTGTTTTCTACGGGTGATTTG
GGTGTACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006284 | base-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008425-T1.utr3p1 | KJC3_008425-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008425-T1.utr5p1 | KJC3_008425-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.13 |
| Note | BUSCO:EOG09264X9R |
| DBxref | InterPro:IPR011257 |
| DBxref | InterPro:IPR003265 |
| DBxref | PFAM:PF00730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2022779..2025465 - |
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