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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2022779..2025465- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008425-T2 ID=KJC3_008425-T2|Name=KJC3_008425-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2687bp|location=Sequence derived from alignment at ch6:2022779..2025465- (Aspergillus niger KJC3)
TCATGATCCACAATAAACTCTGAATTTCATTTTCTAGACTAATCATATCC
ATAACCCATGATTCTGCAGGTTTACTATGTTACTCAACATACGGCGTGTC
TAACCACGGAATGTCATATGACACCATAACTGACTGAAGACCTCAAACTG
AAGCGAGGATGTTTCACACCTCTCAAATGCGGGGGATGAGAGACCACCAT
TCATGCAGAGAAAACCGCAACAAGAAGCGGTATGGAAACCAGGCAGACAA
AGAAAGAGGAAATCAACCATGGTTGATATCATTGATTGCTAAGACAGCTG
CTCGTGACTTCCCGAGCTTATGTACTCCATCCTCATCATAGTACTCCAAC
AACACTAACCGCCATGACTGGTCCATACTACCTACAAACAGCAACAGCGA
TAATATACTTACCCCAATTACTCTTAAATCATCTATATTCTTAACTAGAG
TACACACTGCTGAGAAGCGACTGATTCAATGATGACCCTGCGACGCTCCG
CTCGTCTAACTGCAGCGTCAGTGTCCAAGAACAACAGCACCACCACCACT
GTCCCACATCTGCAACCCAAAACTCAAACAAAGAGAGCAGCCAGCAGAAC
TACAAACGGTGTCTCAAAGACACGAAAGCCTGCTGCAGCGGCAGCAAGGG
GCAAGAAAGCGCAGCTAAATGCGATTCTCAAACTTGACCAAGCTCCTCCC
CTCACAGATTCACCAACATCATCATCATCATCATCATCATCATCACGCTC
AAACAACAGCAGACAATCACCCAATACTACTACTACAGCCACTACTAACA
ACATCTGGGACCCCATCCCCACCCCCACAGTTCACACCTCCAGCAGCAGA
ACGACCCCTCCCCCGCTCGATCGACCGGTCGAACCGCACCACACCAACGC
AACGCTCCTCACCCCCCATGGCTCATCGCTAGTTGCATACCCCCCGGGCA
CAGATGCGGACGCATCACCAAGCAAGACAGGCCGGCCCCGTCCCACCGCC
ACAACAGGCACGCTTCTCGAGAAAGCAGCCGCACACCTGATCGCCACGGA
TCCGCGTCTCGGATCGCTCATCCGCGAACAGCCCTGTCCGTTGTTCACGC
CCGAGGGCCTAGCCGAGGAGATCGACCCGTTTCGGAGCCTTGTTAGTAGT
ATCATTGGACAGCAGGTGTCAGGAGCAGCGGCGAAGTCGATTAAGGATAA
GTTTGTGGCGTTGTTCAAGACAAATAATAAGGATGAGGATGGTACGAGAC
CGAGCTTCTTCCCTACCCCGGAGGAAATCATCAAGATGGATATCAGCACG
CTCCGGACAGCAGGTCTGTCCCAGCGCAAGGCGGAATACATACATGGGTT
ATCGGAGAAGTTTGCCAACGGGGAACTGAGCGCCCGGATGTTATTGAATG
CTAGTGACGAGGAACTCGTTGAGAAGTTGACTGCTGTGCGGGGCTTGGGC
AAATGGTCTGTTGAGATGTTTGCTTGTTTTGCTCTGAAGCGGATAGATGT
GTTTTCTACGGGTGATTTGGGTGTACAGTATGTGATTATCTGTGGGTGAA
TTGGGTAGATGCTGACTTGTGTTGTTGCAGGAGAGGTTGTGCGGTGTTTG
TGGGCAAGGATGTAAACAAGTTGAAGGGGAAGGGCGGCGGTAAGTTCAAG
TATATGCCTGAAAAAGATATGTTGGAGCTGGCGGCGAAGTTTGCTCCGTA
TAGGTATGTGATGCCCGTTGATGTATGTCCTTGTGGGCTTGTTGTCTGAC
ATCCGTACTAGGAGCTTGTTCATGTGGTATATGTGGCGGGTGACGGATGT
TAATATTGCTGTGTTGGGTGGGTAGATTACGACTATATACAGACAGGATA
TAGAACCAGACGTCCGATAGGTATAGTGTGTAGAGCTACTATATGTACAT
TACACAGGAGGTGGGAACGTATATAGGTTCTATACCGGGCATGTATCATG
AACCACGCATAAGCTGAAAGCTACAAGCCAACTAGAGAACGATGACGAGT
GAATTTGTACAGTATCAGTACACGTGATTGAGCACCATAAATCAAAAGCT
TCAATTAACAACCAGCCAAATGCTCTCTCTCTCCCTTCCCTCTCTTCTTC
GCAGCATGCCCGCCGAGCCGAGCCGGGACAGCAAGTTCTCTCTGATACTT
AGTATTCCCGCCCGTCTATAAAACCCCAGCGGCATTTTTGTATACCGTAA
CAAAAGTAATCTAGTTCAGCGAAGCCAGAGACATAATCTACCGTCTGACG
ACAAGGGCGTCGAGGTCTTCACGCTCCTGCTTCTCCTTCTCGATCTCGCG
GATGATGGGGCTCAGGTACTCGACATCCTGGGGACGATGACAGTTAGCAT
CCACGACACGAATATGGTCTTAAACGCGTCAAATAATATATCAGGGACAT
CAATATATCAAGTCCAGTCACCATAAGCATCGATATGGAGTAACCCAGGT
GGGTTACAAATCCCGCTCACGGGATTGGCCGATGCGTTTTTGCGGAGAAA
CTGAACGGACAATTGACGGATTGAAGAACGCGGAAATCGACTCACCTCCT
CGGGCTTGGTCTGCTCAGCAGCGGGAAGGAGGGTGTGGGAGATGGAGCAC
TGTTTCGCGCATATTATGTTAGTTTTACGTTCTTCTGTGGTTGGAGTTCG
GTGTGAGGACGGACCTGGAATGCTCTGCGGATGCGGA back to topCoding sequence (CDS) from alignment at ch6:2022779..2025465- >KJC3_008425-T2 ID=KJC3_008425-T2|Name=KJC3_008425-T2|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch6:2022779..2025465- (Aspergillus niger KJC3)
ATGATGACCCTGCGACGCTCCGCTCGTCTAACTGCAGCGTCAGTGTCCAA
GAACAACAGCACCACCACCACTGTCCCACATCTGCAACCCAAAACTCAAA
CAAAGAGAGCAGCCAGCAGAACTACAAACGGTGTCTCAAAGACACGAAAG
CCTGCTGCAGCGGCAGCAAGGGGCAAGAAAGCGCAGCTAAATGCGATTCT
CAAACTTGACCAAGCTCCTCCCCTCACAGATTCACCAACATCATCATCAT
CATCATCATCATCATCACGCTCAAACAACAGCAGACAATCACCCAATACT
ACTACTACAGCCACTACTAACAACATCTGGGACCCCATCCCCACCCCCAC
AGTTCACACCTCCAGCAGCAGAACGACCCCTCCCCCGCTCGATCGACCGG
TCGAACCGCACCACACCAACGCAACGCTCCTCACCCCCCATGGCTCATCG
CTAGTTGCATACCCCCCGGGCACAGATGCGGACGCATCACCAAGCAAGAC
AGGCCGGCCCCGTCCCACCGCCACAACAGGCACGCTTCTCGAGAAAGCAG
CCGCACACCTGATCGCCACGGATCCGCGTCTCGGATCGCTCATCCGCGAA
CAGCCCTGTCCGTTGTTCACGCCCGAGGGCCTAGCCGAGGAGATCGACCC
GTTTCGGAGCCTTGTTAGTAGTATCATTGGACAGCAGGTGTCAGGAGCAG
CGGCGAAGTCGATTAAGGATAAGTTTGTGGCGTTGTTCAAGACAAATAAT
AAGGATGAGGATGGTACGAGACCGAGCTTCTTCCCTACCCCGGAGGAAAT
CATCAAGATGGATATCAGCACGCTCCGGACAGCAGGTCTGTCCCAGCGCA
AGGCGGAATACATACATGGGTTATCGGAGAAGTTTGCCAACGGGGAACTG
AGCGCCCGGATGTTATTGAATGCTAGTGACGAGGAACTCGTTGAGAAGTT
GACTGCTGTGCGGGGCTTGGGCAAATGGTCTGTTGAGATGTTTGCTTGTT
TTGCTCTGAAGCGGATAGATGTGTTTTCTACGGGTGATTTGGGTGTACAG
TATGTGATTATCTGTGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
| GO:0006284 | base-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008425-T2.utr5p1 | KJC3_008425-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.13 |
| DBxref | InterPro:IPR011257 |
| DBxref | InterPro:IPR003265 |
| DBxref | PFAM:PF00730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2022779..2025465 - |
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