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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2041918..2044599+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008429-T1 ID=KJC3_008429-T1|Name=KJC3_008429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2682bp|location=Sequence derived from alignment at ch6:2041918..2044599+ (Aspergillus niger KJC3) TCTGGCTGGAACTTCGGCGGGTCGATTCTTCCCTGTCAACCTGGAACTTC
TCTTCTGTCGAACGACCATTCCAATCATCTTATCCTCCCCTGGACATCTC
TGTGTCGCTGACTGAGAACTGGTCGGATCACTCTGTGTCCTGATCGTTCA
TCGTCCGCTTCTCACATTCGTTTGAAACCTACTCCTTCTTTGCTGGGGCC
CTCCGGTGCCGCACCACTCCCGCAGCCAGCCTTTTCCCTACCCTTTTTCC
TGCCCCGGGCGATCGCTGGCTCTCCCCCCCCTTCTCCATATCGCATCATC
GACTCTGACATCCCCTGTCGACGCCTTTGATCCGTCAGATTTCAGTCTCG
ATTTTGTGTGATCGTCCCTGCGAATATCAGCATCGCGTCGAAACCCGCTC
CTTTTCCCTTCCCCGGACGGTCCGTCTCTTCCGCTGCCCGTTCTGCATCG
TGTTGTCCGCTCCACGACAGATTGATCGATCTCCTCGGACCCTGGTGTCC
CAGCGACAGGCATCCCATCCCCAGAAATCGTCGCCTAGCTGTAGGCGTCG
ACGGTTTCTGATTACGAAAAGCGAGAGTATTCTGCTCGCTTTCCTGGCCA
ACTCATAATCTTATTTCCCCTTTTTTTTCTCCCTCCCCGTCGCGAAGATG
TTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCC
TCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCT
CATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAG
TCAGCGTCCGAGATGCAGAGGTGAGTACCTGACTCGACGTTGGCCGGGCT
GCCCGCAACACCCGGTCCCTGGCAATGACTTGCAGGCACGCGACCAGAAA
ACGCTAACGGCTGCATGTAGCTTCTACTGCTATGGTCCTTCAAAATCGCC
GATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGA
CCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGC
ATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTC
GAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGC
ATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAAC
CTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGC
TGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGA
TTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATC
GAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCG
CAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGC
CTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCT
GACAGCATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCC
AAGTATGTTGCTAGGCCCTTCATGAAAACCACGAATAAAGGTGCTAACCC
CGTTGCAGACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGG
GTCGATGTATGTAAACAAACATCCCTTCACAATACTCGCTTTGCTAACTC
TCGCAGTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTC
CGAGAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATA
CGACACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACA
AGGACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTG
AAGGCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGA
GAACCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGAT
ACCAGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGAT
GAGAAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAGCTGCATTCCTG
AGTTGATTCTCATTTTCCCGCGGTGTGAGTAGTACGATCTCTGCCACATC
TCATCCTTTGACGCCTGAATACCCCGTTCCCGTGTACATCCGAGCCCTTG
CAGCGGTTCTTTGCATGGAGGCTTTCCTCTTAACGCTTTTATTGAATCTT
CTATCTTCGTTTTTTCTCTTTCTTTCGTGATTGCATTCTTCGGACGCGGG
GACGGATATCTCACGACGCCGGTAATTAAGTCTTTCTTTGTATTGCGTGC
TAGGGTTATGTCTGATTTTGTTGGCGCTACGGGGACAGTGTTCAGCGGTA
TTGGAAGCTCATAGAGAGCGAGTGAGCGGGCTCTGGTTGGAGCCTACGTT
GTTCTTCCAGGCCCAAGCCATGGGCTCCTTTCACAGGCATGGTGCTCTGA
TGCTATTGCTCATCTCTGGAGCCTGCTTGACGCATCATCCACAGTTAGAG
CAGCGCGCGGTATCTGGAATGAGCTACTTTATAGCTCAGGGACGTTGACG
AAAGAGGCAGATGAACAGGGCCATGGTGCTTGGCGTCCATGTACATACAT
ATATAGGCTACAATCTGGTGGGCTTGTTATGA back to topCoding sequence (CDS) from alignment at ch6:2041918..2044599+ >KJC3_008429-T1 ID=KJC3_008429-T1|Name=KJC3_008429-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch6:2041918..2044599+ (Aspergillus niger KJC3) ATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCT GCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGG TCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGC AAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATC GCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGC AGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCG AGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCAT TTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCG AGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCAC AACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCAT GGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGA AGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGAT ATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCG CCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCA AGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGC CCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGT TCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTC GATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGA GAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATACGA CACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGG ACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAG GCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAA CCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACC AGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGATGAG AAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAA GGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAG CTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCTCATTGGCCATT ACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGA GATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGA GCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGACCCCTGTCCTC TTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGT CGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGC GGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAAC TACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAACCTCATTGACTT GGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGCTGTTCTTACCG CTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGT AGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATCGAAATGAACGT CGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCG GTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCT TGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCTGACAGCATCAT TGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCCAAACATTTGGT TCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTCGATTTGACTACAAC TCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCC TGATACTGTTCTGGCTGAAGGCTACAAGGAATACGACACTGGCCGGACTT ACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAG CTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCG GACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCG AGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTT CCGAACTATGTCGTCTGGCACATTGATACGGATGAGAAGCCTGGCAACCT CGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGT GGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTT GTCACACGGACCCGTTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGT CCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCT ACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGAGCATCAATGAAATG GTCGAGTGGACCGCACACACGCAGACCCCTGTCCTCTTCAACCACCACGC TGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCA TCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTC ACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAACTACTTCGATCTCCT CTACAAGCTGACGTATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTG GTGATTGCAGTGACGACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGG ATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGT GCAGAAGGACTTTGGAGCTGATATCGAAATGAACGTCGAGGACAGGCACT CCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAAC TACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAG AGATGTTGACATTTTCGACAGCCCTGACAGCATCATTGAAGATTTCATCG CTCATGACAGGGATATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGG GATGGTGTTGATGTCGAGGGTCGATTTGACTACAACTCCTGGATCGAATC GGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGG CTGAAGGCTACAAGGAATACGACACTGGCCGGACTTACCTGGTCGGCATG GGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGG TGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCGGACTGGCATCAACT TCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGC ATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTTCCGAACTATGTCGT CTGGCACATTGATACGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGG CATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAA GCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCG TTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTG GCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCT TCAAAATCGCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGC ACACACGCAGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGA ACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCC CAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGA TGCATCCGAGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGT ATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGAC GACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGT GGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTG GAGCTGATATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAA GGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTC TGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTT TCGACAGCCCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGAT ATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGT CGAGGGTCGATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCC GCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAG GAATACGACACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAA GAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCC TCGTGAAGGCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCT TTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGC TGGATACCAGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATA CGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008429-T1.utr5p1 | KJC3_008429-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008429-T1.utr3p1 | KJC3_008429-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | CAZy:GT62 |
DBxref | InterPro:IPR029044 |
DBxref | PFAM:PF03452 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2041918..2044599 + |
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