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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2041918..2044599+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008429-T1 ID=KJC3_008429-T1|Name=KJC3_008429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2682bp|location=Sequence derived from alignment at ch6:2041918..2044599+ (Aspergillus niger KJC3)
TCTGGCTGGAACTTCGGCGGGTCGATTCTTCCCTGTCAACCTGGAACTTC
TCTTCTGTCGAACGACCATTCCAATCATCTTATCCTCCCCTGGACATCTC
TGTGTCGCTGACTGAGAACTGGTCGGATCACTCTGTGTCCTGATCGTTCA
TCGTCCGCTTCTCACATTCGTTTGAAACCTACTCCTTCTTTGCTGGGGCC
CTCCGGTGCCGCACCACTCCCGCAGCCAGCCTTTTCCCTACCCTTTTTCC
TGCCCCGGGCGATCGCTGGCTCTCCCCCCCCTTCTCCATATCGCATCATC
GACTCTGACATCCCCTGTCGACGCCTTTGATCCGTCAGATTTCAGTCTCG
ATTTTGTGTGATCGTCCCTGCGAATATCAGCATCGCGTCGAAACCCGCTC
CTTTTCCCTTCCCCGGACGGTCCGTCTCTTCCGCTGCCCGTTCTGCATCG
TGTTGTCCGCTCCACGACAGATTGATCGATCTCCTCGGACCCTGGTGTCC
CAGCGACAGGCATCCCATCCCCAGAAATCGTCGCCTAGCTGTAGGCGTCG
ACGGTTTCTGATTACGAAAAGCGAGAGTATTCTGCTCGCTTTCCTGGCCA
ACTCATAATCTTATTTCCCCTTTTTTTTCTCCCTCCCCGTCGCGAAGATG
TTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCC
TCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCT
CATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAG
TCAGCGTCCGAGATGCAGAGGTGAGTACCTGACTCGACGTTGGCCGGGCT
GCCCGCAACACCCGGTCCCTGGCAATGACTTGCAGGCACGCGACCAGAAA
ACGCTAACGGCTGCATGTAGCTTCTACTGCTATGGTCCTTCAAAATCGCC
GATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGA
CCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGC
ATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTC
GAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGC
ATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAAC
CTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGC
TGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGA
TTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATC
GAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCG
CAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGC
CTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCT
GACAGCATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCC
AAGTATGTTGCTAGGCCCTTCATGAAAACCACGAATAAAGGTGCTAACCC
CGTTGCAGACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGG
GTCGATGTATGTAAACAAACATCCCTTCACAATACTCGCTTTGCTAACTC
TCGCAGTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTC
CGAGAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATA
CGACACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACA
AGGACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTG
AAGGCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGA
GAACCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGAT
ACCAGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGAT
GAGAAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAGCTGCATTCCTG
AGTTGATTCTCATTTTCCCGCGGTGTGAGTAGTACGATCTCTGCCACATC
TCATCCTTTGACGCCTGAATACCCCGTTCCCGTGTACATCCGAGCCCTTG
CAGCGGTTCTTTGCATGGAGGCTTTCCTCTTAACGCTTTTATTGAATCTT
CTATCTTCGTTTTTTCTCTTTCTTTCGTGATTGCATTCTTCGGACGCGGG
GACGGATATCTCACGACGCCGGTAATTAAGTCTTTCTTTGTATTGCGTGC
TAGGGTTATGTCTGATTTTGTTGGCGCTACGGGGACAGTGTTCAGCGGTA
TTGGAAGCTCATAGAGAGCGAGTGAGCGGGCTCTGGTTGGAGCCTACGTT
GTTCTTCCAGGCCCAAGCCATGGGCTCCTTTCACAGGCATGGTGCTCTGA
TGCTATTGCTCATCTCTGGAGCCTGCTTGACGCATCATCCACAGTTAGAG
CAGCGCGCGGTATCTGGAATGAGCTACTTTATAGCTCAGGGACGTTGACG
AAAGAGGCAGATGAACAGGGCCATGGTGCTTGGCGTCCATGTACATACAT
ATATAGGCTACAATCTGGTGGGCTTGTTATGA back to topCoding sequence (CDS) from alignment at ch6:2041918..2044599+ >KJC3_008429-T1 ID=KJC3_008429-T1|Name=KJC3_008429-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch6:2041918..2044599+ (Aspergillus niger KJC3)
ATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCT
GCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGG
TCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGC
AAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATC
GCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGCACACACGC
AGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGAACTCCTCG
AGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCCCAGGCCAT
TTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCG
AGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGTATCCTCAC
AACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGACGACACCAT
GGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGA
AGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGAT
ATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCG
CCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCA
AGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTTTCGACAGC
CCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGATATTTTGGT
TCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTC
GATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGA
GAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAGGAATACGA
CACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGG
ACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAG
GCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAA
CCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACC
AGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATACGGATGAG
AAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAA
GGGTGGTGTAACGTGGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAG
CTGTTCTGTTCCTTGTCACACGGACCCGTTTTCTGGTCTCATTGGCCATT
ACTGGTCTTGTAGTCCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGA
GATGCAGAGCTTCTACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGA
GCATCAATGAAATGGTCGAGTGGACCGCACACACGCAGACCCCTGTCCTC
TTCAACCACCACGCTGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGT
CGACCTCAACCCCATCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGC
GGGTGCTCATCCTCACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAAC
TACTTCGATCTCCTCTACAAGCTGACGTATCCTCACAACCTCATTGACTT
GGCTTTCCTCGTTGGTGATTGCAGTGACGACACCATGGCTGTTCTTACCG
CTGAGCTGTCCCGGATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGT
AGCGCGACAATCGTGCAGAAGGACTTTGGAGCTGATATCGAAATGAACGT
CGAGGACAGGCACTCCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCG
GTCGCGCCCGCAACTACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCT
TGGGTCTACTGGAGAGATGTTGACATTTTCGACAGCCCTGACAGCATCAT
TGAAGATTTCATCGCTCATGACAGGGATATTTTGGTTCCAAACATTTGGT
TCCATCGCTACCGGGATGGTGTTGATGTCGAGGGTCGATTTGACTACAAC
TCCTGGATCGAATCGGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCC
TGATACTGTTCTGGCTGAAGGCTACAAGGAATACGACACTGGCCGGACTT
ACCTGGTCGGCATGGGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAG
CTTGACGGTATCGGTGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCG
GACTGGCATCAACTTCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCG
AGGGATTCGCCCGCATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTT
CCGAACTATGTCGTCTGGCACATTGATACGGATGAGAAGCCTGGCAACCT
CGGAGGCCGCAAGGCATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGT
GGAAGTCTGCCAAAGCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTT
GTCACACGGACCCGTTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGT
CCTACTATGGCGTGGCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCT
ACTGCTATGGTCCTTCAAAATCGCCGATGGAGATGAGCATCAATGAAATG
GTCGAGTGGACCGCACACACGCAGACCCCTGTCCTCTTCAACCACCACGC
TGCCTATGAAGTGAACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCA
TCAAGTCTACCTCCCAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTC
ACCCCTCTGAGAGATGCATCCGAGCATCTGGTCAACTACTTCGATCTCCT
CTACAAGCTGACGTATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTG
GTGATTGCAGTGACGACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGG
ATCCAGGACCAGGTGGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGT
GCAGAAGGACTTTGGAGCTGATATCGAAATGAACGTCGAGGACAGGCACT
CCTTTGCTGCTCAAGGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAAC
TACCTGCTCTACTCTGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAG
AGATGTTGACATTTTCGACAGCCCTGACAGCATCATTGAAGATTTCATCG
CTCATGACAGGGATATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGG
GATGGTGTTGATGTCGAGGGTCGATTTGACTACAACTCCTGGATCGAATC
GGACAAGGGACGCCGCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGG
CTGAAGGCTACAAGGAATACGACACTGGCCGGACTTACCTGGTCGGCATG
GGTGACTGGAGAAAGAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGG
TGGTGTCAACATCCTCGTGAAGGCCGATGTTCACCGGACTGGCATCAACT
TCCCGGCCTACGCTTTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGC
ATGGCTAAGCGCGCTGGATACCAGGTGTACGGTCTTCCGAACTATGTCGT
CTGGCACATTGATACGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGG
CATACTAGATGTTGCTCCCCAAGGGTGGTGTAACGTGGAAGTCTGCCAAA
GCAAGGCTGCCTCCATGGCGAGCTGTTCTGTTCCTTGTCACACGGACCCG
TTTTCTGGTCTCATTGGCCATTACTGGTCTTGTAGTCCTACTATGGCGTG
GCATCAGCAAGTCAGCGTCCGAGATGCAGAGCTTCTACTGCTATGGTCCT
TCAAAATCGCCGATGGAGATGAGCATCAATGAAATGGTCGAGTGGACCGC
ACACACGCAGACCCCTGTCCTCTTCAACCACCACGCTGCCTATGAAGTGA
ACTCCTCGAGCATCAAGACAGTCGACCTCAACCCCATCAAGTCTACCTCC
CAGGCCATTTCGAATTCTGAGCGGGTGCTCATCCTCACCCCTCTGAGAGA
TGCATCCGAGCATCTGGTCAACTACTTCGATCTCCTCTACAAGCTGACGT
ATCCTCACAACCTCATTGACTTGGCTTTCCTCGTTGGTGATTGCAGTGAC
GACACCATGGCTGTTCTTACCGCTGAGCTGTCCCGGATCCAGGACCAGGT
GGATGAGAAGATTGCTTTCCGTAGCGCGACAATCGTGCAGAAGGACTTTG
GAGCTGATATCGAAATGAACGTCGAGGACAGGCACTCCTTTGCTGCTCAA
GGCCCGCGCCGCAAGGCCATCGGTCGCGCCCGCAACTACCTGCTCTACTC
TGCTCTCAAGCCTGACCACTCTTGGGTCTACTGGAGAGATGTTGACATTT
TCGACAGCCCTGACAGCATCATTGAAGATTTCATCGCTCATGACAGGGAT
ATTTTGGTTCCAAACATTTGGTTCCATCGCTACCGGGATGGTGTTGATGT
CGAGGGTCGATTTGACTACAACTCCTGGATCGAATCGGACAAGGGACGCC
GCCTCCGAGAGACTCTCGACCCTGATACTGTTCTGGCTGAAGGCTACAAG
GAATACGACACTGGCCGGACTTACCTGGTCGGCATGGGTGACTGGAGAAA
GAACAAGGACGAGGAAGTTGAGCTTGACGGTATCGGTGGTGTCAACATCC
TCGTGAAGGCCGATGTTCACCGGACTGGCATCAACTTCCCGGCCTACGCT
TTTGAGAACCAGGCTGAAACCGAGGGATTCGCCCGCATGGCTAAGCGCGC
TGGATACCAGGTGTACGGTCTTCCGAACTATGTCGTCTGGCACATTGATA
CGGATGAGAAGCCTGGCAACCTCGGAGGCCGCAAGGCATACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008429-T1.utr5p1 | KJC3_008429-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008429-T1.utr3p1 | KJC3_008429-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT62 |
| DBxref | InterPro:IPR029044 |
| DBxref | PFAM:PF03452 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2041918..2044599 + |
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