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KJC3_008430-T1, KJC3_008430-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008430-T1
Unique NameKJC3_008430-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2044838..2045387+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008430-T1 ID=KJC3_008430-T1|Name=KJC3_008430-T1|organism=Aspergillus niger KJC3|type=mRNA|length=550bp|location=Sequence derived from alignment at ch6:2044838..2045387+ (Aspergillus niger KJC3)
ATGCCTGCCAAGAACGAATTCCTCTGCATCCTCCCGGACAAGCCGGGCAT
GATGGCCAAGCGACTGGAAGTCCGCCCGTAAGAACTACCCCTCACCTGCG
CATTCCCATCATCAATACTGACACCACCGGCTTCACTGAACAGTCAACAC
TTGGAAGGAATCAAGCCCCTCGTCGAAGCCGGCTCTGTGGTTGCGGGAGG
TACATCTCACTTGCCACACTCCCTATTTTCTTCCGCTTCTCCGTTACTGA
CTTCTTCCCCACCAAGGCGCAATGCTCGACAAGCACCCCGCAGAAGGCGA
ATCCATGTCCTTCCAAGGAAGCATGATGATGGTATTGGCGGAGACAAAGG
AGGAAGCCGAGGCACTTATCAAGAACGACATCTACACGAAGAGTGGAGTG
TGGGACTTGGACAAGGCGCAGATTATTCCGGTTTGTGTTCATTCCCTGCT
TCTGCCTCTCTCCCCTTTTGGCAGGGCCATCGTCATGCGTACCTTTTTAC
TAACATGTGGGCGGTTATAGTTCAAGTCTGCCGTTCGGGTGGCATTGTAG
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Coding sequence (CDS) from alignment at ch6:2044838..2045387+

>KJC3_008430-T1 ID=KJC3_008430-T1|Name=KJC3_008430-T1|organism=Aspergillus niger KJC3|type=CDS|length=1308bp|location=Sequence derived from alignment at ch6:2044838..2045387+ (Aspergillus niger KJC3)
ATGCCTGCCAAGAACGAATTCCTCTGCATCCTCCCGGACAAGCCGGGCAT
GATGGCCAAGCGACTGGAAGTCCGCCCTCAACACTTGGAAGGAATCAAGC
CCCTCGTCGAAGCCGGCTCTGTGGTTGCGGGAGGCGCAATGCTCGACAAG
CACCCCGCAGAAGGCGAATCCATGTCCTTCCAAGGAAGCATGATGATGGT
ATTGGCGGAGACAAAGGAGGAAGCCGAGGCACTTATCAAGAACGACATCT
ACACGAAGAGTGGAGTGTGGGACTTGGACAAGGCGCAGATTATTCCGTTC
AAGTCTGCCGTTCGGGTGGCATTGTAGATGCCTGCCAAGAACGAATTCCT
CTGCATCCTCCCGGACAAGCCGGGCATGATGGCCAAGCGACTGGAAGTCC
GCCCTCAACACTTGGAAGGAATCAAGCCCCTCGTCGAAGCCGGCTCTGTG
GTTGCGGGAGGCGCAATGCTCGACAAGCACCCCGCAGAAGGCGAATCCAT
GTCCTTCCAAGGAAGCATGATGATGGTATTGGCGGAGACAAAGGAGGAAG
CCGAGGCACTTATCAAGAACGACATCTACACGAAGAGTGGAGTGTGGGAC
TTGGACAAGGCGCAGATTATTCCGTTCAAGTCTGCCGTTCGGGTGGCATT
GTAGATGCCTGCCAAGAACGAATTCCTCTGCATCCTCCCGGACAAGCCGG
GCATGATGGCCAAGCGACTGGAAGTCCGCCCTCAACACTTGGAAGGAATC
AAGCCCCTCGTCGAAGCCGGCTCTGTGGTTGCGGGAGGCGCAATGCTCGA
CAAGCACCCCGCAGAAGGCGAATCCATGTCCTTCCAAGGAAGCATGATGA
TGGTATTGGCGGAGACAAAGGAGGAAGCCGAGGCACTTATCAAGAACGAC
ATCTACACGAAGAGTGGAGTGTGGGACTTGGACAAGGCGCAGATTATTCC
GTTCAAGTCTGCCGTTCGGGTGGCATTGTAGATGCCTGCCAAGAACGAAT
TCCTCTGCATCCTCCCGGACAAGCCGGGCATGATGGCCAAGCGACTGGAA
GTCCGCCCTCAACACTTGGAAGGAATCAAGCCCCTCGTCGAAGCCGGCTC
TGTGGTTGCGGGAGGCGCAATGCTCGACAAGCACCCCGCAGAAGGCGAAT
CCATGTCCTTCCAAGGAAGCATGATGATGGTATTGGCGGAGACAAAGGAG
GAAGCCGAGGCACTTATCAAGAACGACATCTACACGAAGAGTGGAGTGTG
GGACTTGGACAAGGCGCAGATTATTCCGTTCAAGTCTGCCGTTCGGGTGG
CATTGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008430KJC3_008430Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008430-T1.exon1KJC3_008430-T1.exon1Aspergillus niger KJC3exon
KJC3_008430-T1.exon2KJC3_008430-T1.exon2Aspergillus niger KJC3exon
KJC3_008430-T1.exon3KJC3_008430-T1.exon3Aspergillus niger KJC3exon
KJC3_008430-T1.exon4KJC3_008430-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008430-T1.cdsKJC3_008430-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008430-T1KJC3_008430-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR005545
DBxrefPFAM:PF03795
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2044838..2045387 +
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