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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2060159..2061363+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008437-T1 ID=KJC3_008437-T1|Name=KJC3_008437-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1205bp|location=Sequence derived from alignment at ch6:2060159..2061363+ (Aspergillus niger KJC3) CCACCACCAGATCAGATCAGATAAACCCCGACCGATGACGCAGTCCGCCT
TACCGAAGAGCGGCGGATTTCCTTCCTCTCATCTTATCCCGATAAAGTCG
CACCTCCAACAACTCTCCCTCCATTCAATCGCACCCTCCATTTCCCCTTA
ATTTCACCCTCTACCTAAATGTAACACATCATTCCCAAAGAAACCAACAC
AAAATAACCGTCAAAAAGAATCATGACCCTCCCACGTCTACGGCCCACGG
CCACCCGCCTCCGATACACCACCATCACCACCAAGACCACCACCACACCC
TATACCAAACCACTATACCGCACATTCACCTCATCATCCCCCAAACCCTA
CTCCTCGGCGCGCGAACCAACCTACTACGAAATCCTCGACGTGCCGCCAA
CCGCCACTCAATCCGAGATCAAGAAGTAAATCTCCCCCCCATCCCCTCAC
CACCTAATTCCACCACCCCTATCATCATCTAATTCCTTGATAACAACAGA
AAATTCTACTCCCTCTCCCTAAAACACCACCCCGACCGCAACCGCAGCGA
CCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGCGCGTACAACACGC
TCAGCAACGCCACAAAACGCAGTATCTACGACCGCGACCACCACATCCAC
GCCCACCCCTCCTCCACACACAGCACCGCCAACCCCGGCCAACACCCCAT
GGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACGAAGGGGGCGTCGT
ACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACGGAGGGGACAGTTC
CGCGGGCCGCCGCCTAGTTTCTATGCGCATGGGGGGTATGGGGGCACGGG
GAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGGGAGGGTGGTGGTG
CAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGATCGGAATACCGTG
TGGCATTTTAATGCAAAGGGGCATTATAAGACGCAGACGAGGGAGGATGA
GAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGGGCGGCATCGATTA
ATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGTGAGGTTTATTGTG
GTCTGTGGGATATTGATGGGGGCGGGCGCTATGACGGGGGCGTTCCACAA
TGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTGCGGCGGAAGGAGG
TTTGA back to topCoding sequence (CDS) from alignment at ch6:2060159..2061363+ >KJC3_008437-T1 ID=KJC3_008437-T1|Name=KJC3_008437-T1|organism=Aspergillus niger KJC3|type=CDS|length=1818bp|location=Sequence derived from alignment at ch6:2060159..2061363+ (Aspergillus niger KJC3) ATGACCCTCCCACGTCTACGGCCCACGGCCACCCGCCTCCGATACACCAC CATCACCACCAAGACCACCACCACACCCTATACCAAACCACTATACCGCA CATTCACCTCATCATCCCCCAAACCCTACTCCTCGGCGCGCGAACCAACC TACTACGAAATCCTCGACGTGCCGCCAACCGCCACTCAATCCGAGATCAA GAAAAAATTCTACTCCCTCTCCCTAAAACACCACCCCGACCGCAACCGCA GCGACCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGCGCGTACAAC ACGCTCAGCAACGCCACAAAACGCAGTATCTACGACCGCGACCACCACAT CCACGCCCACCCCTCCTCCACACACAGCACCGCCAACCCCGGCCAACACC CCATGGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACGAAGGGGGCG TCGTACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACGGAGGGGACA GTTCCGCGGGCCGCCGCCTAGTTTCTATGCGCATGGGGGGTATGGGGGCA CGGGGAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGGGAGGGTGGT GGTGCAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGATCGGAATAC CGTGTGGCATTTTAATGCAAAGGGGCATTATAAGACGCAGACGAGGGAGG ATGAGAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGGGCGGCATCG ATTAATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGTGAGGTTTAT TGTGGTCTGTGGGATATTGATGGGGGCGGGCGCTATGACGGGGGCGTTCC ACAATGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTGCGGCGGAAG GAGGTTTGAATGACCCTCCCACGTCTACGGCCCACGGCCACCCGCCTCCG ATACACCACCATCACCACCAAGACCACCACCACACCCTATACCAAACCAC TATACCGCACATTCACCTCATCATCCCCCAAACCCTACTCCTCGGCGCGC GAACCAACCTACTACGAAATCCTCGACGTGCCGCCAACCGCCACTCAATC CGAGATCAAGAAAAAATTCTACTCCCTCTCCCTAAAACACCACCCCGACC GCAACCGCAGCGACCCCACGGCATCCAACCGCTTCGCCCAAATCTCCAGC GCGTACAACACGCTCAGCAACGCCACAAAACGCAGTATCTACGACCGCGA CCACCACATCCACGCCCACCCCTCCTCCACACACAGCACCGCCAACCCCG GCCAACACCCCATGGGCAGCTACAGTAGCTACAGCGCAAACCTGCACACG AAGGGGGCGTCGTACGCGGGCTCGCGACCAGCTAGCGGATTGAGTAAACG GAGGGGACAGTTCCGCGGGCCGCCGCCTAGTTTCTATGCGCATGGGGGGT ATGGGGGCACGGGGAGACGGGCAGCGGGTGCTGCTGGAGGGGGTGGTGGG GAGGGTGGTGGTGCAAAGGGGTCGGAGGACGATCCGACGTCATTTATTGA TCGGAATACCGTGTGGCATTTTAATGCAAAGGGGCATTATAAGACGCAGA CGAGGGAGGATGAGAGGAGGCAGCAACGGAGGTCGAGGGAGATGGCGGGG GCGGCATCGATTAATGACAAGTATCTTGGGAGTCCCGGGGCAATGGCCGT GAGGTTTATTGTGGTCTGTGGGATATTGATGGGGGCGGGCGCTATGACGG GGGCGTTCCACAATGATCGGGCCGGTGCGAAGACGACGACTAAATCCGTG CGGCGGAAGGAGGTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR018253 |
DBxref | InterPro:IPR036869 |
DBxref | InterPro:IPR001623 |
DBxref | PFAM:PF00226 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2060159..2061363 + |
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