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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2066684..2068342- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008440-T1 ID=KJC3_008440-T1|Name=KJC3_008440-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1659bp|location=Sequence derived from alignment at ch6:2066684..2068342- (Aspergillus niger KJC3)
AGACAGTGTTACTTCGTCTGCGCATTCACGGCCGACCTTAATTTGCCTAC
CTCACTATCCTTTAAATACCTCAGACCTTGTTCTCCCCGCCTCACTACCT
TCTCCTCTTCCCCTCTCCCTCCCAACCTTCTCAACCCTCTCGCCGTCAAC
CCAGCCTTCTTCGGTTCCAGCCCACCTACGTACTCCGAAACCGCATCCCA
AAATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAGGTATGTGGCTGAC
AACGTTGCATATGCCTCTTATGGCGTGTCATTCCTCAAACTAACCCCAAA
CGCGACTATCTACAGAAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCT
ATGCAAAGCCGCATCGGACTCCTCAAGGAACACTTGACCTCAAACGATGG
GAGTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTT
CAAGCTTGACGTTACTTTCCCCGATGGTGAGTGAAGTCTATCGACGGGTG
CTTTATGCGACAAACCTGCTAACCCGCGTTCTATCGCAGAATACCCCACT
AAGCCGCCGAAGTGTAGGTTCCCCTCTCTGCCGTACTATTCCCAACGCCA
CCCTTCTGCGCTATTTGGTTTTCCCCCCTGTGGCACTTCTCGCACAGTAA
GCTAACCAGATCATCCACATTCAACAGGCAAATTCGTGCCTCCGCTTTTC
CACCCCAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGA
GGAGGAGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTA
TTCAGGACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAA
GCCTACAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAG
ACAAGTCGTGAGGGAGAACCCGGCCCTTTAATACCGCTCAACGACGGCAT
GACAAGTTGTTATCTTACCATGAAGCTACTCTCCCGCTCGTCGTGTGTTT
AATTCGGCCCCCGATCTCATCCCATGTCTGCGAATTTCACGGCGGATATG
GCGGCTTGATAGTCTTAGACCAGCTGTTCCCACGTGGGGTAGAAGGACGG
GAAGCCTTCCAAGAGGGAGAGCGCAAGTACACCCACCCGGGATTTCACGA
TAATGCTGAGCGCGCCATTCCTGTCAAACGGGTTTCGAAATGTCGCATTG
GCGCAGGTGTGTCTTCACTAATTCCTGTCTTGGAGGGTGTCGAATACTCG
GGTTTCTTCTTAGCGAGCAGCGTGGCGTACATAGAACTGACAAAACTGGG
CGGTTCGGGACGGCGTTTGACACTCTAATGCGATTTATCTAGCTTATGTC
TCTTCTTTCTCTTGGGATGCTCGCACACTTCTACGTCTACCATAGGGGGT
GCATGTTGGTGACCGATTTTCGGATGATCATACCATAGAAAGACGGCTTG
TGCCCCCTGGGTGGGGGGAAGGGTCCTCTCTAATCGACTCCAACTCAAAG
TGTCTCCAATCTGTCATCCTTAGTGCGTAAAAGTAAAACAAGTTCCAGAA
AGATCAAAAATCTGGAGAAAGTACTTTTAGTAGAAAATGTGGGGGATGTG
CAGGCTGTGAAGGGAAAATGGACAACAGTTGAACGTTGGGACCAGAGACC
AGACCCAAC back to topCoding sequence (CDS) from alignment at ch6:2066684..2068342- >KJC3_008440-T1 ID=KJC3_008440-T1|Name=KJC3_008440-T1|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch6:2066684..2068342- (Aspergillus niger KJC3)
GCAAATTCGTGCCTCCGCTTTTCCACCCCAACGTCTATCCATCCGGCACT
GTGTGTCTTTCGATCTTGAACGAGGAGGAGGCATGGAAGCCCGCAATCAC
GATCAAGCAGATCCTTCTTGGTATTCAGGACCTGCTAGACGACCCCAACC
CTGAGTCACCAGCTCAGGCTGAAGCCTACAACTTGTTCAAGAAGGATCGG
CCAGCGTATGAGAAGCGAGTTAGACAAGTCGTGAGGGAGAACCCGGCCCT
TTAAAATACCCCACTAAGCCGCCGAAGTAAAGCAGTGGCGCCGAGACCAC
CCTTTTGGCTTCTATGCAAAGCCGCATCGGACTCCTCAAGGAACACTTGA
CCTCAAACGATGGGAGTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGG
AAGGCGGGCTTTTCAAGCTTGACGTTACTTTCCCCGATGATGTCGCTTTG
CCAGAATCGTCTGACGGAGGAGAGGCAAATTCGTGCCTCCGCTTTTCCAC
CCCAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGAGGA
GGAGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTATTC
AGGACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAAGCC
TACAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAGACA
AGTCGTGAGGGAGAACCCGGCCCTTTAAAATACCCCACTAAGCCGCCGAA
GTAAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCTATGCAAAGCCGCA
TCGGACTCCTCAAGGAACACTTGACCTCAAACGATGGGAGTGTGGTATCC
CCGGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTTCAAGCTTGACGTT
ACTTTCCCCGATGATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAGGC
AAATTCGTGCCTCCGCTTTTCCACCCCAACGTCTATCCATCCGGCACTGT
GTGTCTTTCGATCTTGAACGAGGAGGAGGCATGGAAGCCCGCAATCACGA
TCAAGCAGATCCTTCTTGGTATTCAGGACCTGCTAGACGACCCCAACCCT
GAGTCACCAGCTCAGGCTGAAGCCTACAACTTGTTCAAGAAGGATCGGCC
AGCGTATGAGAAGCGAGTTAGACAAGTCGTGAGGGAGAACCCGGCCCTTT
AAAATACCCCACTAAGCCGCCGAAGTAAAGCAGTGGCGCCGAGACCACCC
TTTTGGCTTCTATGCAAAGCCGCATCGGACTCCTCAAGGAACACTTGACC
TCAAACGATGGGAGTGTGGTATCCCCGGAAAGGCGCAAACCCTCTGGGAA
GGCGGGCTTTTCAAGCTTGACGTTACTTTCCCCGATGATGTCGCTTTGCC
AGAATCGTCTGACGGAGGAGAGGCAAATTCGTGCCTCCGCTTTTCCACCC
CAACGTCTATCCATCCGGCACTGTGTGTCTTTCGATCTTGAACGAGGAGG
AGGCATGGAAGCCCGCAATCACGATCAAGCAGATCCTTCTTGGTATTCAG
GACCTGCTAGACGACCCCAACCCTGAGTCACCAGCTCAGGCTGAAGCCTA
CAACTTGTTCAAGAAGGATCGGCCAGCGTATGAGAAGCGAGTTAGACAAG
TCGTGAGGGAGAACCCGGCCCTTTAAAATACCCCACTAAGCCGCCGAAGT
AAAGCAGTGGCGCCGAGACCACCCTTTTGGCTTCTATGCAAAGCCGCATC
GGACTCCTCAAGGAACACTTGACCTCAAACGATGGGAGTGTGGTATCCCC
GGAAAGGCGCAAACCCTCTGGGAAGGCGGGCTTTTCAAGCTTGACGTTAC
TTTCCCCGATGATGTCGCTTTGCCAGAATCGTCTGACGGAGGAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008440-T1.utr3p1 | KJC3_008440-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008440-T1.utr5p1 | KJC3_008440-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR000608 |
| DBxref | InterPro:IPR016135 |
| DBxref | PFAM:PF00179 |
| Product | SUMO conjugating enzyme Hus5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2066684..2068342 - |
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