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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2069009..2071072- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008441-T1 ID=KJC3_008441-T1|Name=KJC3_008441-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2064bp|location=Sequence derived from alignment at ch6:2069009..2071072- (Aspergillus niger KJC3)
GATTGATTGCACACTGGGAAACTGTCGCTTGAACTGTCCCTTGTTGGATC
TTGTTCTACTTTCATTTCATATCAGAAATGGCTTCTGATTCCACCCCCGC
AAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCTAGATCCCTCTG
CCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCGTCTTCAAGCAG
AGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAATCCGCTGCCAA
AAAGCAGCAGCTCAGTGCTGGTAGACTCATACCCTCTTCTGTTAACTGAG
CCATGTTATCTATATTTGAACGATCTGATTGCTCACTTGTCCGCCCGGTT
GCTCTCGTCGGTGGTTTCCAGCTTCTCTCAGATTTCAGCCTACCAAGAGG
CCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAAAGGC
TGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACTCTCG
CAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTATGCCGGT
CCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCGAGGC
GCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGCGACCGA
ACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAGGTGAGG
GAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCCCAGCAG
GGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCGTAAGCTAT
ATATTCTCAAGAGCGAGATGTCTATTTGCTCAAAAAACGTTCTAGGTAAA
TTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCC
GCCCAGGCCACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAG
GCGATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAG
CCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACG
GCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGC
CACCACCACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACT
ATATCCCGCGCACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACAT
ACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAG
TGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAG
AAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTC
TGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAG
TTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACG
CCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGA
GGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTG
ATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGT
CTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGGTAGGTGGATGTTT
ACTCACTACATGGCATAAACTAATGCGGTACAGTACGGTCGTGTTGAACG
TGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGTCAAGT
TTACCAATCAGCTCTCGGCTCTACGTGTAAGTGCTGCATCCATGTCCCAT
GCCCATTTCAAGGATCCGGCTAAGAACTATGCATAGGCTGTCAACGCTCT
TGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATG
TACATACTTTCGAACAGGGGATATACGATAGCTAATAGCGGGAAGGAACT
CTGTATATGATACCTCACAAGTTTTGAACTGAAGAATACAAGCGAGAGAC
ATTTGTCTCACATCTATCCATATCTAGCATGTTCGTCTGGAGTGCCACAA
CAAGACTACTATGA back to topCoding sequence (CDS) from alignment at ch6:2069009..2071072- >KJC3_008441-T1 ID=KJC3_008441-T1|Name=KJC3_008441-T1|organism=Aspergillus niger KJC3|type=CDS|length=7980bp|location=Sequence derived from alignment at ch6:2069009..2071072- (Aspergillus niger KJC3)
GCTGTCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGC
CCGGTTCTACGATGTACATACTTTCGAACAGGGGATATACGATAGCTAAT
ACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTG
CCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTT
GCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCC
CAGGCCACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCG
ATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCG
CCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCG
CCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCAC
CACCACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATA
TCCCGCGCACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACATACC
TGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGG
AAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAA
GGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGG
CCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTG
AGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCC
GCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGG
GAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATG
GAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTC
ATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAG
CCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGAC
GTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCA
AGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGA
TTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAA
GAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACC
CGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATA
GCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAG
ATCGCCCAGCAGGGACTCGCAAAGTGACGATGATTATGCACGACCCATGA
ACCATGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACT
CTACGCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCG
CTCGCGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGAC
TCTCAGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGCTG
TCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGG
TTCTACGATGTACATACTTTCGAACAGGGGATATACGATAGCTAATACGG
TCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAG
TTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTC
CTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGG
CCACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATAT
TTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCG
CACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTC
CAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACC
ACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCC
GCGCACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACATACCTGCG
TCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGA
TGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGT
TTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTG
GGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAA
ACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTG
GTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAG
TTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAAT
GGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGC
AAGAAATTGGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTA
CCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTA
CCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGAC
TACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCT
ATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAAT
CGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTC
GCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTG
AGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCG
CCCAGCAGGGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCA
TGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTAC
GCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCG
CGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTC
AGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGCTGTCAA
CGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCT
ACGATGTACATACTTTCGAACAGGGGATATACGATAGCTAATACGGTCGT
GTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTT
TGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCTCC
GAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCCAC
CCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATATTTCA
ATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACA
AGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAA
TGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCA
CCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCCGCGC
ACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACATACCTGCGTCAG
AGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAA
CCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGC
TGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTG
CCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAG
AAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCG
GGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTG
GTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAATGGAC
TTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGA
AATTGGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACCAA
GAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAA
AGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACT
CTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTATGC
CGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCG
AGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGCGA
CCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAGGT
GAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCCCA
GCAGGGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCATGGC
TTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCA
ATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCC
CCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTC
CGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGCTGTCAACGCT
CTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGA
TGTACATACTTTCGAACAGGGGATATACGATAGCTAATACGGTCGTGTTG
AACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGTC
AAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCTCCGAGC
AGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCAT
CGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGT
CGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTT
CCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTC
GATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCA
GGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCCGCGCACCG
GTTCGCTACACGCTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGC
GGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGG
AAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAG
CGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCAC
GGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGA
AACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGC
AAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCC
AATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAATGGACTTGG
ATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATT
GGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACCAAGAGG
CCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAAAGGC
TGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACTCTCG
CAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTATGCCGGT
CCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCGAGGC
GCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGCGACCGA
ACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAGGTGAGG
GAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCCCAGCAG
GGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCATGGCTTCT
GATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCT
GCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGG
TCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGAT
GAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGCTGTCAACGCTCTTG
AGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATGTA
CATACTTTCGAACAGGGGATATACGATAGCTAATACGGTCGTGTTGAACG
TGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGTCAAGT
TTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCTCCGAGCAGCT
TCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCATCGAA
TCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGA
TGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGG
ATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATG
GGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCC
CCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCCGCGCACCGGTTC
GCTACACGCTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAA
CTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGA
TGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGAC
TCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGC
TCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACG
ACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGA
TCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATG
AGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAATGGACTTGGATGC
TGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCG
AAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACCAAGAGGCCCC
AGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAAAGGCTGCT
GCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACTCTCGCAGA
TTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTATGCCGGTCCGA
AGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCGAGGCGCAG
GAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGCGACCGAACAA
CTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAGGTGAGGGAGT
GGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCCCAGCAGGGAC
TCGCAAAGTGACGATGATTATGCACGACCCATGAACCATGGCTTCTGATT
CCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCTA
GATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCGT
CTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAAT
CCGCTGCCAAAAAGCAGCAGCTCAGTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008441-T1.utr3p1 | KJC3_008441-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008441-T1.utr5p1 | KJC3_008441-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR000467 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF01585 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2069009..2071072 - |
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