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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2071281..2073324+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008442-T1 ID=KJC3_008442-T1|Name=KJC3_008442-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2044bp|location=Sequence derived from alignment at ch6:2071281..2073324+ (Aspergillus niger KJC3)
CCCCAGAAGAGTGGTCTTCGTGGTGTGGTGAATACTTTCTCGGATTCCGA
TTCTACATCTCACAAGAGTCATAAGCAATTGAGCTTCATCAATACTATTG
ATTCAATTCCGATCAGCATCCCTGCCAAGCCAAGACCCTAAGCGTTACTA
TCCTGCAGCATACTAGCGACGATGGCGACCTTGGCCCGGTCATTTTCCTC
CGATAGTGCTGACCTTGCTGTCCTAGTCCCCAATAAACCCACTCCGCTGT
CGATCTCCTATCAGCAGCTACACAACCATATCGCCGATTTCCAGGCTAAG
CTAGCTCGACTGGGTGTCACTCATGGCGCTGCGGTATCGCTGGCTCTGAT
TAACTCCTATGAGTTCATAGTCGCCTTTCTTGCCGCCTCCTGGCAGCGGG
CCATCGCCGCGCCCTTGAATCCGGCCTATAAGCAAGAGGAATTTGAATTC
TACATCGACGATCTGAGCTCCACTCTGCTTTTAATTCCGAAGGGGTCATA
CATAAAGGATGGACCAGCCGTTCGCGCGGGCAGGAAGTACCAGGCTGCTA
TCGCGGAGTGCTACTGGAACGGTTCCGAGATCGTTCTAGACGTCAAGGAA
CATGGAAAACTGGCCGGCAATGGGGGCGCAGATATTCAGGAAGCTCAGCC
CGATGACATTGCCCTCGTTCTACATACCAGTGGGACGACTGGCAGGCCCA
AAGCTGTATGCTCGATCGACTATCCCACATCCTATTGGATACCTCATATC
ACTAACATTCCGATCTACTACTTGCCATGCAGGTCCCACTCACCCACAAG
AACTTGACAACTACAATGAGTAAGTAGCAGTACAATTTCACATAGACACA
CTCAGAAGCAACAGTAAACAGTCGCTGAACAGATCCACTAACATACTACA
GGGAACATCCAAGCAACATACAACCTCACCCCAGCAGACCGGACATACCT
CGTAATGCCACTTTTCCACGTCCACGGTCTCCTCGCAGCATTCCTAGCCC
CTCTATACTCCGGAGGCTCCGTAATAGTCCCTCCCAGATTTTCCGCAACA
GATTTCTGGACCGACTTCACCACTCACAAAGCAAACTGGTACACGGCAGT
ACCAACCATCCACCAAATCCTCCTCAAAACACCTCTCCCCAACCCGGTTC
CTCCAATTCGCTTCATCCGCTCATGTTCTTCACCCCTCTCCCCCAAAACC
TTTCAAGACCTAGAAAAGGCCTTTAACGCCCCCGTCCTCGAAGCCTACGC
CATGACCGAAGCCGCCCACCAAATGACCAGCAACCCTCTTCCCCCAGGAA
AGCGCCAACCCGGCAGCGTAGGTCTAGGCCAAGACGTGGAAGTAAGAATC
CTCGACAACAACGGCAACGAAGTGCCGCAAGGTCAAGAAGCCGAGATTTG
CGTCCGAGGCGACAATGTAACAAAGGGCTACCTGAACAACCCGTCCGCGA
ATGCATCATCCTTCACTGGGGACGGGTTCTTCCGCACAGGCGATCAGGGC
AAGAAAGATGCCGATGGCTACGTTATCATCACGGGCCGTATCAAGGAACT
TATCAATAAGGGAGGTGAGAAGATCAGTCCGATCGAATTGGATAATACGC
TTTTGCATCATCCGAAGGTGGCGGAGGCTGTGTGCTTCGCTATTCCGGAT
GAGGGCCACTATGGGGAGGATATCGGGGCTGCGGTGGTGCTTAAGAGTCA
TGGTGCCGCTACTGAAGAGGAATTGAAGGCGTGGGTGGAGTCAAAGTTGG
CTAAGTTCAAGACGCCCAAGAAGGTGAGTTGCCTCTTCATTGTTGTTGCT
TTGATGAGAGATGGGTCACTGACTGATCTCAAATAACAAACAGGTGTGGC
TGGTCCCGCAGATTCCCAAGACGGCGACTGGTAAGATTCAACGACGGAAA
GTGGCAGAGGCGATGCTCAAGGTTAAAGCGAAGCTGTAAGAATGTGGTTT
GTAGCTTTTTATCTAGATAGAATGTCTTTCATACTATGAGAAGTCTGAGT
CCCGTTTAAAACCTATGTGGAAAATGTTACTTGTGTGATATTTC back to topCoding sequence (CDS) from alignment at ch6:2071281..2073324+ >KJC3_008442-T1 ID=KJC3_008442-T1|Name=KJC3_008442-T1|organism=Aspergillus niger KJC3|type=CDS|length=6156bp|location=Sequence derived from alignment at ch6:2071281..2073324+ (Aspergillus niger KJC3)
ATGGCGACCTTGGCCCGGTCATTTTCCTCCGATAGTGCTGACCTTGCTGT
CCTAGTCCCCAATAAACCCACTCCGCTGTCGATCTCCTATCAGCAGCTAC
ACAACCATATCGCCGATTTCCAGGCTAAGCTAGCTCGACTGGGTGTCACT
CATGGCGCTGCGGTATCGCTGGCTCTGATTAACTCCTATGAGTTCATAGT
CGCCTTTCTTGCCGCCTCCTGGCAGCGGGCCATCGCCGCGCCCTTGAATC
CGGCCTATAAGCAAGAGGAATTTGAATTCTACATCGACGATCTGAGCTCC
ACTCTGCTTTTAATTCCGAAGGGGTCATACATAAAGGATGGACCAGCCGT
TCGCGCGGGCAGGAAGTACCAGGCTGCTATCGCGGAGTGCTACTGGAACG
GTTCCGAGATCGTTCTAGACGTCAAGGAACATGGAAAACTGGCCGGCAAT
GGGGGCGCAGATATTCAGGAAGCTCAGCCCGATGACATTGCCCTCGTTCT
ACATACCAGTGGGACGACTGGCAGGCCCAAAGCTGTCCCACTCACCCACA
AGAACTTGACAACTACAATGAGGAACATCCAAGCAACATACAACCTCACC
CCAGCAGACCGGACATACCTCGTAATGCCACTTTTCCACGTCCACGGTCT
CCTCGCAGCATTCCTAGCCCCTCTATACTCCGGAGGCTCCGTAATAGTCC
CTCCCAGATTTTCCGCAACAGATTTCTGGACCGACTTCACCACTCACAAA
GCAAACTGGTACACGGCAGTACCAACCATCCACCAAATCCTCCTCAAAAC
ACCTCTCCCCAACCCGGTTCCTCCAATTCGCTTCATCCGCTCATGTTCTT
CACCCCTCTCCCCCAAAACCTTTCAAGACCTAGAAAAGGCCTTTAACGCC
CCCGTCCTCGAAGCCTACGCCATGACCGAAGCCGCCCACCAAATGACCAG
CAACCCTCTTCCCCCAGGAAAGCGCCAACCCGGCAGCGTAGGTCTAGGCC
AAGACGTGGAAGTAAGAATCCTCGACAACAACGGCAACGAAGTGCCGCAA
GGTCAAGAAGCCGAGATTTGCGTCCGAGGCGACAATGTAACAAAGGGCTA
CCTGAACAACCCGTCCGCGAATGCATCATCCTTCACTGGGGACGGGTTCT
TCCGCACAGGCGATCAGGGCAAGAAAGATGCCGATGGCTACGTTATCATC
ACGGGCCGTATCAAGGAACTTATCAATAAGGGAGGTGAGAAGATCAGTCC
GATCGAATTGGATAATACGCTTTTGCATCATCCGAAGGTGGCGGAGGCTG
TGTGCTTCGCTATTCCGGATGAGGGCCACTATGGGGAGGATATCGGGGCT
GCGGTGGTGCTTAAGAGTCATGGTGCCGCTACTGAAGAGGAATTGAAGGC
GTGGGTGGAGTCAAAGTTGGCTAAGTTCAAGACGCCCAAGAAGGTGTGGC
TGGTCCCGCAGATTCCCAAGACGGCGACTGGTAAGATTCAACGACGGAAA
GTGGCAGAGGCGATGCTCAAGGTTAAAGCGAAGCTGTAAATGGCGACCTT
GGCCCGGTCATTTTCCTCCGATAGTGCTGACCTTGCTGTCCTAGTCCCCA
ATAAACCCACTCCGCTGTCGATCTCCTATCAGCAGCTACACAACCATATC
GCCGATTTCCAGGCTAAGCTAGCTCGACTGGGTGTCACTCATGGCGCTGC
GGTATCGCTGGCTCTGATTAACTCCTATGAGTTCATAGTCGCCTTTCTTG
CCGCCTCCTGGCAGCGGGCCATCGCCGCGCCCTTGAATCCGGCCTATAAG
CAAGAGGAATTTGAATTCTACATCGACGATCTGAGCTCCACTCTGCTTTT
AATTCCGAAGGGGTCATACATAAAGGATGGACCAGCCGTTCGCGCGGGCA
GGAAGTACCAGGCTGCTATCGCGGAGTGCTACTGGAACGGTTCCGAGATC
GTTCTAGACGTCAAGGAACATGGAAAACTGGCCGGCAATGGGGGCGCAGA
TATTCAGGAAGCTCAGCCCGATGACATTGCCCTCGTTCTACATACCAGTG
GGACGACTGGCAGGCCCAAAGCTGTCCCACTCACCCACAAGAACTTGACA
ACTACAATGAGGAACATCCAAGCAACATACAACCTCACCCCAGCAGACCG
GACATACCTCGTAATGCCACTTTTCCACGTCCACGGTCTCCTCGCAGCAT
TCCTAGCCCCTCTATACTCCGGAGGCTCCGTAATAGTCCCTCCCAGATTT
TCCGCAACAGATTTCTGGACCGACTTCACCACTCACAAAGCAAACTGGTA
CACGGCAGTACCAACCATCCACCAAATCCTCCTCAAAACACCTCTCCCCA
ACCCGGTTCCTCCAATTCGCTTCATCCGCTCATGTTCTTCACCCCTCTCC
CCCAAAACCTTTCAAGACCTAGAAAAGGCCTTTAACGCCCCCGTCCTCGA
AGCCTACGCCATGACCGAAGCCGCCCACCAAATGACCAGCAACCCTCTTC
CCCCAGGAAAGCGCCAACCCGGCAGCGTAGGTCTAGGCCAAGACGTGGAA
GTAAGAATCCTCGACAACAACGGCAACGAAGTGCCGCAAGGTCAAGAAGC
CGAGATTTGCGTCCGAGGCGACAATGTAACAAAGGGCTACCTGAACAACC
CGTCCGCGAATGCATCATCCTTCACTGGGGACGGGTTCTTCCGCACAGGC
GATCAGGGCAAGAAAGATGCCGATGGCTACGTTATCATCACGGGCCGTAT
CAAGGAACTTATCAATAAGGGAGGTGAGAAGATCAGTCCGATCGAATTGG
ATAATACGCTTTTGCATCATCCGAAGGTGGCGGAGGCTGTGTGCTTCGCT
ATTCCGGATGAGGGCCACTATGGGGAGGATATCGGGGCTGCGGTGGTGCT
TAAGAGTCATGGTGCCGCTACTGAAGAGGAATTGAAGGCGTGGGTGGAGT
CAAAGTTGGCTAAGTTCAAGACGCCCAAGAAGGTGTGGCTGGTCCCGCAG
ATTCCCAAGACGGCGACTGGTAAGATTCAACGACGGAAAGTGGCAGAGGC
GATGCTCAAGGTTAAAGCGAAGCTGTAAATGGCGACCTTGGCCCGGTCAT
TTTCCTCCGATAGTGCTGACCTTGCTGTCCTAGTCCCCAATAAACCCACT
CCGCTGTCGATCTCCTATCAGCAGCTACACAACCATATCGCCGATTTCCA
GGCTAAGCTAGCTCGACTGGGTGTCACTCATGGCGCTGCGGTATCGCTGG
CTCTGATTAACTCCTATGAGTTCATAGTCGCCTTTCTTGCCGCCTCCTGG
CAGCGGGCCATCGCCGCGCCCTTGAATCCGGCCTATAAGCAAGAGGAATT
TGAATTCTACATCGACGATCTGAGCTCCACTCTGCTTTTAATTCCGAAGG
GGTCATACATAAAGGATGGACCAGCCGTTCGCGCGGGCAGGAAGTACCAG
GCTGCTATCGCGGAGTGCTACTGGAACGGTTCCGAGATCGTTCTAGACGT
CAAGGAACATGGAAAACTGGCCGGCAATGGGGGCGCAGATATTCAGGAAG
CTCAGCCCGATGACATTGCCCTCGTTCTACATACCAGTGGGACGACTGGC
AGGCCCAAAGCTGTCCCACTCACCCACAAGAACTTGACAACTACAATGAG
GAACATCCAAGCAACATACAACCTCACCCCAGCAGACCGGACATACCTCG
TAATGCCACTTTTCCACGTCCACGGTCTCCTCGCAGCATTCCTAGCCCCT
CTATACTCCGGAGGCTCCGTAATAGTCCCTCCCAGATTTTCCGCAACAGA
TTTCTGGACCGACTTCACCACTCACAAAGCAAACTGGTACACGGCAGTAC
CAACCATCCACCAAATCCTCCTCAAAACACCTCTCCCCAACCCGGTTCCT
CCAATTCGCTTCATCCGCTCATGTTCTTCACCCCTCTCCCCCAAAACCTT
TCAAGACCTAGAAAAGGCCTTTAACGCCCCCGTCCTCGAAGCCTACGCCA
TGACCGAAGCCGCCCACCAAATGACCAGCAACCCTCTTCCCCCAGGAAAG
CGCCAACCCGGCAGCGTAGGTCTAGGCCAAGACGTGGAAGTAAGAATCCT
CGACAACAACGGCAACGAAGTGCCGCAAGGTCAAGAAGCCGAGATTTGCG
TCCGAGGCGACAATGTAACAAAGGGCTACCTGAACAACCCGTCCGCGAAT
GCATCATCCTTCACTGGGGACGGGTTCTTCCGCACAGGCGATCAGGGCAA
GAAAGATGCCGATGGCTACGTTATCATCACGGGCCGTATCAAGGAACTTA
TCAATAAGGGAGGTGAGAAGATCAGTCCGATCGAATTGGATAATACGCTT
TTGCATCATCCGAAGGTGGCGGAGGCTGTGTGCTTCGCTATTCCGGATGA
GGGCCACTATGGGGAGGATATCGGGGCTGCGGTGGTGCTTAAGAGTCATG
GTGCCGCTACTGAAGAGGAATTGAAGGCGTGGGTGGAGTCAAAGTTGGCT
AAGTTCAAGACGCCCAAGAAGGTGTGGCTGGTCCCGCAGATTCCCAAGAC
GGCGACTGGTAAGATTCAACGACGGAAAGTGGCAGAGGCGATGCTCAAGG
TTAAAGCGAAGCTGTAAATGGCGACCTTGGCCCGGTCATTTTCCTCCGAT
AGTGCTGACCTTGCTGTCCTAGTCCCCAATAAACCCACTCCGCTGTCGAT
CTCCTATCAGCAGCTACACAACCATATCGCCGATTTCCAGGCTAAGCTAG
CTCGACTGGGTGTCACTCATGGCGCTGCGGTATCGCTGGCTCTGATTAAC
TCCTATGAGTTCATAGTCGCCTTTCTTGCCGCCTCCTGGCAGCGGGCCAT
CGCCGCGCCCTTGAATCCGGCCTATAAGCAAGAGGAATTTGAATTCTACA
TCGACGATCTGAGCTCCACTCTGCTTTTAATTCCGAAGGGGTCATACATA
AAGGATGGACCAGCCGTTCGCGCGGGCAGGAAGTACCAGGCTGCTATCGC
GGAGTGCTACTGGAACGGTTCCGAGATCGTTCTAGACGTCAAGGAACATG
GAAAACTGGCCGGCAATGGGGGCGCAGATATTCAGGAAGCTCAGCCCGAT
GACATTGCCCTCGTTCTACATACCAGTGGGACGACTGGCAGGCCCAAAGC
TGTCCCACTCACCCACAAGAACTTGACAACTACAATGAGGAACATCCAAG
CAACATACAACCTCACCCCAGCAGACCGGACATACCTCGTAATGCCACTT
TTCCACGTCCACGGTCTCCTCGCAGCATTCCTAGCCCCTCTATACTCCGG
AGGCTCCGTAATAGTCCCTCCCAGATTTTCCGCAACAGATTTCTGGACCG
ACTTCACCACTCACAAAGCAAACTGGTACACGGCAGTACCAACCATCCAC
CAAATCCTCCTCAAAACACCTCTCCCCAACCCGGTTCCTCCAATTCGCTT
CATCCGCTCATGTTCTTCACCCCTCTCCCCCAAAACCTTTCAAGACCTAG
AAAAGGCCTTTAACGCCCCCGTCCTCGAAGCCTACGCCATGACCGAAGCC
GCCCACCAAATGACCAGCAACCCTCTTCCCCCAGGAAAGCGCCAACCCGG
CAGCGTAGGTCTAGGCCAAGACGTGGAAGTAAGAATCCTCGACAACAACG
GCAACGAAGTGCCGCAAGGTCAAGAAGCCGAGATTTGCGTCCGAGGCGAC
AATGTAACAAAGGGCTACCTGAACAACCCGTCCGCGAATGCATCATCCTT
CACTGGGGACGGGTTCTTCCGCACAGGCGATCAGGGCAAGAAAGATGCCG
ATGGCTACGTTATCATCACGGGCCGTATCAAGGAACTTATCAATAAGGGA
GGTGAGAAGATCAGTCCGATCGAATTGGATAATACGCTTTTGCATCATCC
GAAGGTGGCGGAGGCTGTGTGCTTCGCTATTCCGGATGAGGGCCACTATG
GGGAGGATATCGGGGCTGCGGTGGTGCTTAAGAGTCATGGTGCCGCTACT
GAAGAGGAATTGAAGGCGTGGGTGGAGTCAAAGTTGGCTAAGTTCAAGAC
GCCCAAGAAGGTGTGGCTGGTCCCGCAGATTCCCAAGACGGCGACTGGTA
AGATTCAACGACGGAAAGTGGCAGAGGCGATGCTCAAGGTTAAAGCGAAG
CTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008442-T1.utr5p1 | KJC3_008442-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008442-T1.utr3p1 | KJC3_008442-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020845 |
| DBxref | InterPro:IPR000873 |
| DBxref | InterPro:IPR025110 |
| DBxref | InterPro:IPR042099 |
| DBxref | PFAM:PF13193 |
| DBxref | PFAM:PF00501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2071281..2073324 + |
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