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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2083999..2085235- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008447-T1 ID=KJC3_008447-T1|Name=KJC3_008447-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1237bp|location=Sequence derived from alignment at ch6:2083999..2085235- (Aspergillus niger KJC3)
ATGGGTGACTCTGAGCCTGTGACTACTGCTACTGCTACTGCTACTGCTAC
CACTAGTAAACCTATCAGATATGTTGATGTAGGTGGACAATCACTGTTGC
CCTGTGGAACCCTCGCTGTTTGTTGTCCTAAGTAGCTAATGGAGAGACTA
TAGATTGGAATCAACCTGAGTGATCCCGTTTTCTCGGGTAGCTACCATGG
CAAACAGGTTCACGACAATGACCTGGACGACATTGTACAACGTGCAAAGG
ACATCGGGTGCCAGAAATTCATGGTGACTGGCTCTGACCTAAAGGAGTCT
CGGCGGGCGATTCAACTTGCACATGACTACCGTAAGTTGTTATCTCCCCT
CAAACAGCAGTGATTTCCGTCTGACTTTATTCTGCAGCTGGATTTTGCTA
TGCAACTGTTGGTGTCCACCCTTGTCAGGCGAAGATGTTCGATGAATACC
CCGGTGGTCCTTCCAAAATGCTAGACGAGCTCAGGACGCTCGCATTGCAG
TCGAAGGAGAATGGACAGGCTGTCGCGTTCGGTGAAATCGGCCTGGATTA
TGATCGCTTGTTCCTGAGTGCGAAAGAACCTCAGCTGAAGTACTTTGAAG
CCCAGTTGGATCTTGCTGTGGAAATCCAACTTCCTCTTTTCCTTCATTCT
CGTGCTGCTAGTGAGGATTTCGAGAGATTGTTGGGGCCGCGACTTGCCAA
GCTTCCTAAGAGAGGACTTGTGCATAGTTTTACAGGGACCCTGGAAGAGA
TGGAGCGGATGGTTGCTCTTGGACTTGACATCGGCGTGAACGGCTGCAGT
CTGAAGACAGAGGAGAACCTCGAAGTGGTGAAGGCCATCCCGCTGGAGAG
ACTTCAGATCGAGACAGACGGCCCTTGGGTATGTCTCACTTTTCTGTCAC
TAAATGAGTACATTTACTGACTCCGAACTCTAGTGCGAAATTCGTCCTTC
CCATGCCTCGTCGAAATACCTCAAGGGTGCGCCGGAATTGCCAAAGGCCG
TCAAGAAGGAAAGGTGGCAGAAGGGTCTCATGGTCAAGGGTCGCAATGAG
CCTGCCGCGATAGCCCATGTCGCCTACGTCATCGCCCAGATCAAGGGAGT
GACCGTTGAAGAGGTCTGCGAAGCGTAAGTATTTCCTCATACCATCGGAT
ATAGCCTGAATATGTCGCTAAATTTGTCTCATTTCTAGTGCTTGGAATAA
CTCGATCAAAATGTTTGGACTTGGGGAAGATGCATAA back to topCoding sequence (CDS) from alignment at ch6:2083999..2085235- >KJC3_008447-T1 ID=KJC3_008447-T1|Name=KJC3_008447-T1|organism=Aspergillus niger KJC3|type=CDS|length=4935bp|location=Sequence derived from alignment at ch6:2083999..2085235- (Aspergillus niger KJC3)
TGCTTGGAATAACTCGATCAAAATGTTTGGACTTGGGGAAGATGCATAAT
GCGAAATTCGTCCTTCCCATGCCTCGTCGAAATACCTCAAGGGTGCGCCG
GAATTGCCAAAGGCCGTCAAGAAGGAAAGGTGGCAGAAGGGTCTCATGGT
CAAGGGTCGCAATGAGCCTGCCGCGATAGCCCATGTCGCCTACGTCATCG
CCCAGATCAAGGGAGTGACCGTTGAAGAGGTCTGCGAAGCCTGGATTTTG
CTATGCAACTGTTGGTGTCCACCCTTGTCAGGCGAAGATGTTCGATGAAT
ACCCCGGTGGTCCTTCCAAAATGCTAGACGAGCTCAGGACGCTCGCATTG
CAGTCGAAGGAGAATGGACAGGCTGTCGCGTTCGGTGAAATCGGCCTGGA
TTATGATCGCTTGTTCCTGAGTGCGAAAGAACCTCAGCTGAAGTACTTTG
AAGCCCAGTTGGATCTTGCTGTGGAAATCCAACTTCCTCTTTTCCTTCAT
TCTCGTGCTGCTAGTGAGGATTTCGAGAGATTGTTGGGGCCGCGACTTGC
CAAGCTTCCTAAGAGAGGACTTGTGCATAGTTTTACAGGGACCCTGGAAG
AGATGGAGCGGATGGTTGCTCTTGGACTTGACATCGGCGTGAACGGCTGC
AGTCTGAAGACAGAGGAGAACCTCGAAGTGGTGAAGGCCATCCCGCTGGA
GAGACTTCAGATCGAGACAGACGGCCCTTGGATTGGAATCAACCTGAGTG
ATCCCGTTTTCTCGGGTAGCTACCATGGCAAACAGGTTCACGACAATGAC
CTGGACGACATTGTACAACGTGCAAAGGACATCGGGTGCCAGAAATTCAT
GGTGACTGGCTCTGACCTAAAGGAGTCTCGGCGGGCGATTCAACTTGCAC
ATGACTACCATGGGTGACTCTGAGCCTGTGACTACTGCTACTGCTACTGC
TACTGCTACCACTAGTAAACCTATCAGATATGTTGATTGCTTGGAATAAC
TCGATCAAAATGTTTGGACTTGGGGAAGATGCATAATGCGAAATTCGTCC
TTCCCATGCCTCGTCGAAATACCTCAAGGGTGCGCCGGAATTGCCAAAGG
CCGTCAAGAAGGAAAGGTGGCAGAAGGGTCTCATGGTCAAGGGTCGCAAT
GAGCCTGCCGCGATAGCCCATGTCGCCTACGTCATCGCCCAGATCAAGGG
AGTGACCGTTGAAGAGGTCTGCGAAGCCTGGATTTTGCTATGCAACTGTT
GGTGTCCACCCTTGTCAGGCGAAGATGTTCGATGAATACCCCGGTGGTCC
TTCCAAAATGCTAGACGAGCTCAGGACGCTCGCATTGCAGTCGAAGGAGA
ATGGACAGGCTGTCGCGTTCGGTGAAATCGGCCTGGATTATGATCGCTTG
TTCCTGAGTGCGAAAGAACCTCAGCTGAAGTACTTTGAAGCCCAGTTGGA
TCTTGCTGTGGAAATCCAACTTCCTCTTTTCCTTCATTCTCGTGCTGCTA
GTGAGGATTTCGAGAGATTGTTGGGGCCGCGACTTGCCAAGCTTCCTAAG
AGAGGACTTGTGCATAGTTTTACAGGGACCCTGGAAGAGATGGAGCGGAT
GGTTGCTCTTGGACTTGACATCGGCGTGAACGGCTGCAGTCTGAAGACAG
AGGAGAACCTCGAAGTGGTGAAGGCCATCCCGCTGGAGAGACTTCAGATC
GAGACAGACGGCCCTTGGATTGGAATCAACCTGAGTGATCCCGTTTTCTC
GGGTAGCTACCATGGCAAACAGGTTCACGACAATGACCTGGACGACATTG
TACAACGTGCAAAGGACATCGGGTGCCAGAAATTCATGGTGACTGGCTCT
GACCTAAAGGAGTCTCGGCGGGCGATTCAACTTGCACATGACTACCATGG
GTGACTCTGAGCCTGTGACTACTGCTACTGCTACTGCTACTGCTACCACT
AGTAAACCTATCAGATATGTTGATTGCTTGGAATAACTCGATCAAAATGT
TTGGACTTGGGGAAGATGCATAATGCGAAATTCGTCCTTCCCATGCCTCG
TCGAAATACCTCAAGGGTGCGCCGGAATTGCCAAAGGCCGTCAAGAAGGA
AAGGTGGCAGAAGGGTCTCATGGTCAAGGGTCGCAATGAGCCTGCCGCGA
TAGCCCATGTCGCCTACGTCATCGCCCAGATCAAGGGAGTGACCGTTGAA
GAGGTCTGCGAAGCCTGGATTTTGCTATGCAACTGTTGGTGTCCACCCTT
GTCAGGCGAAGATGTTCGATGAATACCCCGGTGGTCCTTCCAAAATGCTA
GACGAGCTCAGGACGCTCGCATTGCAGTCGAAGGAGAATGGACAGGCTGT
CGCGTTCGGTGAAATCGGCCTGGATTATGATCGCTTGTTCCTGAGTGCGA
AAGAACCTCAGCTGAAGTACTTTGAAGCCCAGTTGGATCTTGCTGTGGAA
ATCCAACTTCCTCTTTTCCTTCATTCTCGTGCTGCTAGTGAGGATTTCGA
GAGATTGTTGGGGCCGCGACTTGCCAAGCTTCCTAAGAGAGGACTTGTGC
ATAGTTTTACAGGGACCCTGGAAGAGATGGAGCGGATGGTTGCTCTTGGA
CTTGACATCGGCGTGAACGGCTGCAGTCTGAAGACAGAGGAGAACCTCGA
AGTGGTGAAGGCCATCCCGCTGGAGAGACTTCAGATCGAGACAGACGGCC
CTTGGATTGGAATCAACCTGAGTGATCCCGTTTTCTCGGGTAGCTACCAT
GGCAAACAGGTTCACGACAATGACCTGGACGACATTGTACAACGTGCAAA
GGACATCGGGTGCCAGAAATTCATGGTGACTGGCTCTGACCTAAAGGAGT
CTCGGCGGGCGATTCAACTTGCACATGACTACCATGGGTGACTCTGAGCC
TGTGACTACTGCTACTGCTACTGCTACTGCTACCACTAGTAAACCTATCA
GATATGTTGATTGCTTGGAATAACTCGATCAAAATGTTTGGACTTGGGGA
AGATGCATAATGCGAAATTCGTCCTTCCCATGCCTCGTCGAAATACCTCA
AGGGTGCGCCGGAATTGCCAAAGGCCGTCAAGAAGGAAAGGTGGCAGAAG
GGTCTCATGGTCAAGGGTCGCAATGAGCCTGCCGCGATAGCCCATGTCGC
CTACGTCATCGCCCAGATCAAGGGAGTGACCGTTGAAGAGGTCTGCGAAG
CCTGGATTTTGCTATGCAACTGTTGGTGTCCACCCTTGTCAGGCGAAGAT
GTTCGATGAATACCCCGGTGGTCCTTCCAAAATGCTAGACGAGCTCAGGA
CGCTCGCATTGCAGTCGAAGGAGAATGGACAGGCTGTCGCGTTCGGTGAA
ATCGGCCTGGATTATGATCGCTTGTTCCTGAGTGCGAAAGAACCTCAGCT
GAAGTACTTTGAAGCCCAGTTGGATCTTGCTGTGGAAATCCAACTTCCTC
TTTTCCTTCATTCTCGTGCTGCTAGTGAGGATTTCGAGAGATTGTTGGGG
CCGCGACTTGCCAAGCTTCCTAAGAGAGGACTTGTGCATAGTTTTACAGG
GACCCTGGAAGAGATGGAGCGGATGGTTGCTCTTGGACTTGACATCGGCG
TGAACGGCTGCAGTCTGAAGACAGAGGAGAACCTCGAAGTGGTGAAGGCC
ATCCCGCTGGAGAGACTTCAGATCGAGACAGACGGCCCTTGGATTGGAAT
CAACCTGAGTGATCCCGTTTTCTCGGGTAGCTACCATGGCAAACAGGTTC
ACGACAATGACCTGGACGACATTGTACAACGTGCAAAGGACATCGGGTGC
CAGAAATTCATGGTGACTGGCTCTGACCTAAAGGAGTCTCGGCGGGCGAT
TCAACTTGCACATGACTACCATGGGTGACTCTGAGCCTGTGACTACTGCT
ACTGCTACTGCTACTGCTACCACTAGTAAACCTATCAGATATGTTGATTG
CTTGGAATAACTCGATCAAAATGTTTGGACTTGGGGAAGATGCATAATGC
GAAATTCGTCCTTCCCATGCCTCGTCGAAATACCTCAAGGGTGCGCCGGA
ATTGCCAAAGGCCGTCAAGAAGGAAAGGTGGCAGAAGGGTCTCATGGTCA
AGGGTCGCAATGAGCCTGCCGCGATAGCCCATGTCGCCTACGTCATCGCC
CAGATCAAGGGAGTGACCGTTGAAGAGGTCTGCGAAGCCTGGATTTTGCT
ATGCAACTGTTGGTGTCCACCCTTGTCAGGCGAAGATGTTCGATGAATAC
CCCGGTGGTCCTTCCAAAATGCTAGACGAGCTCAGGACGCTCGCATTGCA
GTCGAAGGAGAATGGACAGGCTGTCGCGTTCGGTGAAATCGGCCTGGATT
ATGATCGCTTGTTCCTGAGTGCGAAAGAACCTCAGCTGAAGTACTTTGAA
GCCCAGTTGGATCTTGCTGTGGAAATCCAACTTCCTCTTTTCCTTCATTC
TCGTGCTGCTAGTGAGGATTTCGAGAGATTGTTGGGGCCGCGACTTGCCA
AGCTTCCTAAGAGAGGACTTGTGCATAGTTTTACAGGGACCCTGGAAGAG
ATGGAGCGGATGGTTGCTCTTGGACTTGACATCGGCGTGAACGGCTGCAG
TCTGAAGACAGAGGAGAACCTCGAAGTGGTGAAGGCCATCCCGCTGGAGA
GACTTCAGATCGAGACAGACGGCCCTTGGATTGGAATCAACCTGAGTGAT
CCCGTTTTCTCGGGTAGCTACCATGGCAAACAGGTTCACGACAATGACCT
GGACGACATTGTACAACGTGCAAAGGACATCGGGTGCCAGAAATTCATGG
TGACTGGCTCTGACCTAAAGGAGTCTCGGCGGGCGATTCAACTTGCACAT
GACTACCATGGGTGACTCTGAGCCTGTGACTACTGCTACTGCTACTGCTA
CTGCTACCACTAGTAAACCTATCAGATATGTTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR018228 |
| DBxref | InterPro:IPR001130 |
| DBxref | PFAM:PF01026 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2083999..2085235 - |
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