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KJC3_008448-T1, KJC3_008448-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008448-T1
Unique NameKJC3_008448-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2089582..2090487+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008448-T1 ID=KJC3_008448-T1|Name=KJC3_008448-T1|organism=Aspergillus niger KJC3|type=mRNA|length=906bp|location=Sequence derived from alignment at ch6:2089582..2090487+ (Aspergillus niger KJC3)
ATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCA
GCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCG
CCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCC
AGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAG
ATCTAGTGGCTCCCAGTCCGAGGTATGCTATCTATGACATCTACACTCCT
AGTCAAACCACCTGTATGGCTAATCATTATTTTGTGTCGCTTAGCTTGTC
GAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGC
TATGAAGAGGATCAACGGCAGCTCTAGCGCTGAGTATGTAGATCTGATCA
TCATGACAGCCCGTTACCTCGGGTAAAGCCAGTTCGGAACTAACATTCTT
GCTCAACACAGGAAGAACCATGGCCGCCAATTCAACACTTCCCGTTCTAG
CAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTA
TGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATC
CTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCC
CATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCG
CAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCC
TTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAA
GAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGA
GTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAA
CACTAA
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Coding sequence (CDS) from alignment at ch6:2089582..2090487+

>KJC3_008448-T1 ID=KJC3_008448-T1|Name=KJC3_008448-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch6:2089582..2090487+ (Aspergillus niger KJC3)
ATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCA
GCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCG
CCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCC
AGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAG
ATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTTCCAATCATGACT
TCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGGATCAACGGCAGC
TCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACACTTCCCGTTCTAG
CAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTA
TGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATC
CTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCC
CATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCG
CAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCC
TTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAA
GAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGA
GTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAA
CACTAAATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCT
CTCCCAGCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCA
CCGGCGCCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTG
TATGCCAGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTC
CTTGAGATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTTCCAATC
ATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGGATCAAC
GGCAGCTCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACACTTCCCG
TTCTAGCAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGC
CATCTATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATC
CCGATCCTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGA
GGCCCCCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACA
TCTCCGCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATC
GATCCCTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGA
GCTGAAGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAAC
TTTGGAGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCT
CAGAAACACTAAATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCG
CGTGCTCTCCCAGCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGC
ACATCACCGGCGCCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCT
TCTCTGTATGCCAGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAA
GCGGTCCTTGAGATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTT
CCAATCATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGG
ATCAACGGCAGCTCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACAC
TTCCCGTTCTAGCAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTT
ACATGCCATCTATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCG
CAAATCCCGATCCTTTCCGACATCTATACCCACTATGACCCGACCCAGTC
GCAAGAGGCCCCCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTG
GTGACATCTCCGCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTG
GACATCGATCCCTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGG
CGAGGAGCTGAAGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCC
GGGAACTTTGGAGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAG
CAAGCTCAGAAACACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008448KJC3_008448Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008448-T1.exon1KJC3_008448-T1.exon1Aspergillus niger KJC3exon
KJC3_008448-T1.exon2KJC3_008448-T1.exon2Aspergillus niger KJC3exon
KJC3_008448-T1.exon3KJC3_008448-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008448-T1.cdsKJC3_008448-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008448-T1KJC3_008448-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036361
DBxrefInterPro:IPR003034
DBxrefPFAM:PF02037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2089582..2090487 +
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