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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2115272..2118000- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008455-T1 ID=KJC3_008455-T1|Name=KJC3_008455-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2729bp|location=Sequence derived from alignment at ch6:2115272..2118000- (Aspergillus niger KJC3)
CCGACACTCCTCCTTGAAGCTCCATTTGCCCCCCTTCGGAGCTTTCCGTT
CTGACAGGCTGACCGGATACCTCAATTCCTCCTGTCATCTGATCATGCAG
TGAAATTGCTTTGTCTCTTCTCTCCCTAGAGATCTCACAGTCCCTCTTCC
ACCTTGCACCATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGA
CCTCTGCGCTGCACAGACGATTCGTTCATGCGTCGGCACTGGCGCTTCTG
GTCTGCTATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTTGTAAGTT
TACACCAACACCGAGCGGCGTTTGACAAGCTGTGATCGCTAACCAGCTGT
GATATCTCGATAGTCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGT
TCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTG
TTGGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACC
TTCAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTT
GTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTA
GCGCACACCTGGAATTGGTGAACCGAGCTAGGTATGTTTCCTGCGACGAC
GAGCTCAAGCGGTTCTCTTGAATTCGCCTAACTAGTTATGCTAGACCTCA
CGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACT
TTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGAT
CGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGA
TAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGC
AGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGC
CCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACT
GTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTC
CCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCA
GGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGT
GTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAG
CCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAA
ACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGCCAGAGATT
TCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAGGAGGGTG
CAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTT
ACCACTCGCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGC
ACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGG
ACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACT
CGCCAACAAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGG
CAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCT
TGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTG
CTCGGTTCCTCCCAGGACCTCAAGATGCTCACCGCGCCATCAACTAGCAA
GCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAG
GCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTC
GGCACACCCCACGCCAACCTCTGCTCCGTCATCGACGCCACCGAATCCCT
CACCTGCCTTCTCATCAAGAGTCTCGCGGAAGACCAATACGGAAAGGTCC
AAGCCGACGTAGCCACCGTCGTACGCCTACTGACCGATACCATCACGACC
CTCGAACCTTTCATTAACGGCGGCCTCGATGCTCACTGGACAGACGTCAA
CTTCCCCCCATCCAGCAACCCGGAAGCACAAGCTGCGGCTCGCCGTGTCC
CTGATGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTT
CTGTCTTCCTTCGGCCCTTACTTCAAGAACCTCGGCCTTGGAGCCAAGGA
CTTAAGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTA
ACTAAGGGCAGTGCGCGTGGGGCGCATGTAGTGTACGTATTGATTGGGGG
CCTGATTCGGGAGTTGGAGTGTGTCCTTGATTGTTTGCTTGCTTTACCGC
TTTTATCACATCACCCATTCAACTTCCCACCAGAGATGTCCCTGTTGTCC
TTGTTGTATGGCACATCTAACTGACTCCATCCATCTAGCGCGCCACGGTC
ACGTGCTGCAATGGATAGAGTCAGTTAGCTTTGGTGTCGCTTTCTTCACT
GCCTTTCGATATTATTGTTGTTTCTTCGTGACTGGTATTTCTTTCATAAT
GCCCCCTTCCCTTTGGAAAAGTTACGACCTAGACTCTGTGGGTTTTGGCT
ATGCATTGCTCTGGCGTTAAGTGGGCAGGCAGTATAACTGGCTGTATGTA
TGTATTATTTACTTATTTACTTCATTTAGTGAATGAGAGGGTTTAGAGTT
CATTTACTACTACTTACTACCAACACGAA back to topCoding sequence (CDS) from alignment at ch6:2115272..2118000- >KJC3_008455-T1 ID=KJC3_008455-T1|Name=KJC3_008455-T1|organism=Aspergillus niger KJC3|type=CDS|length=5886bp|location=Sequence derived from alignment at ch6:2115272..2118000- (Aspergillus niger KJC3)
ACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCT
ACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGAC
TACGATCGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGA
TGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCAT
TGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATT
CTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCAC
TACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCAT
CCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTG
ATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTT
CTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGG
CTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAG
AAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGCCA
GAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAGG
AGGGTGCAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACG
GGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTAA
GCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGC
TGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCA
ACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAGC
CTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGCG
ATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAG
AAGCTGCTCGGTTCCTCCCAGGACCTCAAGATGCTCACCGCGCCATCAAC
TAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTC
CACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATT
GTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCATCGACGCCACCGA
ATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAAGACCAATACGGAA
AGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTGACCGATACCATC
ACGACCCTCGAACCTTTCATTAACGGCGGCCTCGATGCTCACTGGACAGA
CGTCAACTTCCCCCCATCCAGCAACCCGGAAGCACAAGCTGCGGCTCGCC
GTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAG
GACCTTCTGTCTTCCTTCGGCCCTTACTTCAAGAACCTCGGCCTTGGAGC
CAAGGACTTAAGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATC
CCTTTAACTAATCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGTTC
GCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTT
GGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTT
CAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTTGT
TCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGC
GCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCAGCACAGCCTCGC
CCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGC
GTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCG
ATAAGTCATCTTACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCT
ACCTTTATACCTACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCAT
CTTTACTACGACTACGATCGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGC
TGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCC
TCCAGTCAGCATTGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATC
TTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCC
GGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGA
GATCCGCTGCATCCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATC
GTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGC
TAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCC
AGCCCTTGACGGCTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGA
CTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTA
CTTCATCAGCCAGAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACA
TCGATCGCGAGGAGGGTGCAGTTTGGTCGCAAATCCTGCAAGCCGCCACA
GATGTCATCACGGGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATC
ATCTGGCCCTAAGCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACT
CCCTGCCACGGCTGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCG
TCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCAC
CACCGCCAGAGCCTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCG
CCAAAGCCCGCGATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCT
GAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGACCTCAAGATGCTCAC
CGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGC
TCCTCCGCTCTCCACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGC
CTCTCCGGCATTGTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCAT
CGACGCCACCGAATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAAG
ACCAATACGGAAAGGTCCAAGCCGACGTAGCCACCGTCGTACGCCTACTG
ACCGATACCATCACGACCCTCGAACCTTTCATTAACGGCGGCCTCGATGC
TCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACCCGGAAGCACAAG
CTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCCTGGACACAATGAAG
GCATCCCTCAAGGACCTTCTGTCTTCCTTCGGCCCTTACTTCAAGAACCT
CGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAGCAGCCGGTGTCG
TGGAAGAGGATCCCTTTAACTAATCTTGTGGGCTTGGTTCCCCATTGGAG
GATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTC
GTCCTCCGTGTTGGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCC
GCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTG
GCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCT
TCTTCAAGTAGCGCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCA
GCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACG
ATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCAT
TTGCTATTGGCGATAAGTCATCTTACCTCACGAACGAGCAAGCTTAAACG
AAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGCAGTCGCGCAG
TCAGTGGTTCATCTTTACTACGACTACGATCGCGTCCCTCTTCCCGTTGC
CAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAGGAGCAATCGA
TCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAAAGATGGGATG
AAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGCCTTCGT
CCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCAAAGCTATTCT
GGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTATCCCGCCAATC
CTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGTTCTCTG
CTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGCAAAGAGCCGC
TCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCCCAACGGCAGC
TTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTTTGCATT
CTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGACCGCCGGAAGGCCA
TCTTCAACGACATCGATCGCGAGGAGGGTGCAGTTTGGTCGCAAATCCTG
CAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAGCGAGGC
TAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTCCAGCAGTCCGAGC
CCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAAGGCGGACAAC
ATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTTCGGCGA
AGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCTGACTGGACGC
CTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGCCTCCTCCGCC
ATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCAGGACCT
CAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAACCTGCACCCCT
TCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTTCCGCCAAACC
TACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGCCAACCT
CTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGCCTTCTCATCAAGA
GTCTCGCGGAAGACCAATACGGAAAGGTCCAAGCCGACGTAGCCACCGTC
GTACGCCTACTGACCGATACCATCACGACCCTCGAACCTTTCATTAACGG
CGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCCATCCAGCAACC
CGGAAGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCCTG
GACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCCTTCGGCCCTTA
CTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAG
CAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTAATCTTGTGGGCTTGGT
TCCCCATTGGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGT
CTCGTTGTCTTCGTCCTCCGTGTTGGTCAGATGCACATCGGTGCCAGGAC
AACCTCCTCCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTA
TACAGACTTTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATC
TACAGGTGGTCTTCTTCAAGTAGCGCACACCTGGAATTGGTGAACCGAGC
TAGATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGC
GCTGCACAGACGATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCT
ATGTAGTGGCATTTGCTATTGGCGATAAGTCATCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008455-T1.utr3p1 | KJC3_008455-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008455-T1.utr5p1 | KJC3_008455-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019049 |
| DBxref | PFAM:PF09531 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2115272..2118000 - |
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