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KJC3_008456-T1, KJC3_008456-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008456-T1
Unique NameKJC3_008456-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2118265..2119159+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008456-T1 ID=KJC3_008456-T1|Name=KJC3_008456-T1|organism=Aspergillus niger KJC3|type=mRNA|length=895bp|location=Sequence derived from alignment at ch6:2118265..2119159+ (Aspergillus niger KJC3)
ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCG
TCGCTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGA
CCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG
TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGT
GCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGGGTTTCAGGG
ATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCGTA
TGTTACGCCCATATATAACCCCCCCACTGCGCTGCGACCGAACAAGCAAT
ATTAATGTATTTCTCACCAGCCTTCCCAAAAATGGACTCAGCAGAAGCTA
TCGTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGTCG
TGCCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAG
ACGAAGCGGAGCCTGGTTCCGGAGGTGACCATCAGCCGCAGCAACAGCAA
GACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTGGA
CTTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTG
AGCAGAGCGTTGGCGAACTCAATGAACTGTTCCGGGACGTGGCTCACATT
GTCCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAACG
AGTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCC
GGTACCAGAAGAATGCGCGCAACAAGGCTTGCTGTCTGCTTGTCATTCTT
GCTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG
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Coding sequence (CDS) from alignment at ch6:2118265..2119159+

>KJC3_008456-T1 ID=KJC3_008456-T1|Name=KJC3_008456-T1|organism=Aspergillus niger KJC3|type=CDS|length=1644bp|location=Sequence derived from alignment at ch6:2118265..2119159+ (Aspergillus niger KJC3)
ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCG
TCGCTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGA
CCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG
TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGT
GCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGGGTTTCAGGG
ATGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCCCT
TCCCAAAAATGGACTCAGCAGAAGCTATCGTCCGAATTTAAATCTACCCT
AGAAGAGTTCCAGACTGTTCAGCGTCGTGCCTTGGAGAAGCAACGGGCAT
CCGCAGCAGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCCGGA
GGTGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACAGCC
CCGCCTTGCGAATCAGGACGAAGTGGACTTCCAGGAGGCCCTCATTATCG
AGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTCAAT
GAACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACAGCT
TGATATTATCAGCGAGAACGTTGAACGAGTTGGCGATGACACTCGTGGAG
CAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGCAAC
AAGGCTTGCTGTCTGCTTGTCATTCTTGCTGTTATCCTTACCATCATCGT
CCTGGCGGCAACCCTGGGATAGATGTCGTTTGATCGCTTGAACTCGCTAG
AGGCACAGCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGCGAT
GACCCCGAATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTTTAC
CCTGACCTCCAACATCACTCGGTTATCCGATCAGATTGCCCTTCTGGGAA
CGAGGCGAGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTGGAG
GATACTCGGGGGGGTTTCAGGGATGTCGCAGAAGGGATTAAGAAGGTCCA
GACATGGGAGGATGTCAGCCCTTCCCAAAAATGGACTCAGCAGAAGCTAT
CGTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGTCGT
GCCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGA
CGAAGCGGAGCCTGGTTCCGGAGGTGACCATCAGCCGCAGCAACAGCAAG
ACCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTGGAC
TTCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTGA
GCAGAGCGTTGGCGAACTCAATGAACTGTTCCGGGACGTGGCTCACATTG
TCCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAACGA
GTTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCG
GTACCAGAAGAATGCGCGCAACAAGGCTTGCTGTCTGCTTGTCATTCTTG
CTGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008456KJC3_008456Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008456-T1.exon1KJC3_008456-T1.exon1Aspergillus niger KJC3exon
KJC3_008456-T1.exon2KJC3_008456-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008456-T1.cdsKJC3_008456-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008456-T1KJC3_008456-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR006012
DBxrefInterPro:IPR006011
DBxrefInterPro:IPR000727
DBxrefPFAM:PF14523
DBxrefPFAM:PF05739
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2118265..2119159 +
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