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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2127004..2127740- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008460-T1 ID=KJC3_008460-T1|Name=KJC3_008460-T1|organism=Aspergillus niger KJC3|type=mRNA|length=737bp|location=Sequence derived from alignment at ch6:2127004..2127740- (Aspergillus niger KJC3)
ATTGTCTCGACCGTCGTGCTTCTCTGCCTCATTCAAAGTGGGTGAAACCT
GTTGCTTTTCATACGCCATCCAGTCAATTGCCTCTAACTCAGCTCAAGAT
GTACGCTGCTACCGCCCTCCGCGCCAGAATGGCCACCTCCCTCGTTGCCC
GTCGTGGCTTTTCCACCACCCGCGCTCAGCTCGGTAGCCCTTACCACTAC
GCCGAGGGCCCTCGCTCCAACATTCCCTTCAACCCCCTGACCAAGTACTT
CTTCTGGAGATACTGGGCCTTCATGGGTATGTGGCCCAATTGGACGCTGT
AGTCGTTGCGAATTGGACGTCTGACTGACTTGCTTACTCTAGTTACCGGT
TTCGGTGCCCCCTTCGCCATTGCTGGTATGTTACCATTCGTCTTGCGACA
GTCCATATTCGTCTCTCTAACATGTCCATTCCTACAGTCTGGCAGACCTA
CAAGACCCGCTAAACGCTCTCTCGTGCTGTATTTCCACATGCAATGGCAT
TGTTGGGCATTGGCAGTTGGTCGAAAATGTATCCTACGTTGGAAGCGCTC
GGAAATTGTGTATAAAGCTAGAGAATTTATTATGCTCTGATTCAGGAAAT
TCCCGGTGTGAAACTCACACCAAAAACATCTGTAGTTGGGGGACGAAGTG
CGGTGTGGTGGTGGTTGTCTGATGCCTTATTAGAATATGGATGAAGTCAT
TGGTCGATTTTTTGTCAGTAGGAAAATTAAAATCTTT back to topCoding sequence (CDS) from alignment at ch6:2127004..2127740- >KJC3_008460-T1 ID=KJC3_008460-T1|Name=KJC3_008460-T1|organism=Aspergillus niger KJC3|type=CDS|length=852bp|location=Sequence derived from alignment at ch6:2127004..2127740- (Aspergillus niger KJC3)
TTACCGGTTTCGGTGCCCCCTTCGCCATTGCTGGTATGTTACCATTCGTC
TTGCGACAGTCCATATTCGTCTCTCTAACATGTCCATTCCTACAGTCTGG
CAGACCTACAAGACCCGCTAAACGCTCTCTCGTGCTGTATTTCCACATGC
AATGGCATTGTTGGGCATTGGCAGTTGGTCGAAAATGTATCCTACGTTGG
AAGCGCTCGGAAATTGTGTATAAAGCTAGAGAATTTATTATGCTCTGAAT
GTACGCTGCTACCGCCCTCCGCGCCAGAATGGCCACCTCCCTCGTTGCCC
GTCGTGGCTTTTCCACCACCCGCGCTCAGCTCGGTAGCCCTTACCACTAC
GCCGAGGGCCCTCGCTCCAACATTCCCTTCAACCCCCTGACCAAGTACTT
CTTCTGGAGATACTGGGCCTTCATGGTTACCGGTTTCGGTGCCCCCTTCG
CCATTGCTGGTATGTTACCATTCGTCTTGCGACAGTCCATATTCGTCTCT
CTAACATGTCCATTCCTACAGTCTGGCAGACCTACAAGACCCGCTAAACG
CTCTCTCGTGCTGTATTTCCACATGCAATGGCATTGTTGGGCATTGGCAG
TTGGTCGAAAATGTATCCTACGTTGGAAGCGCTCGGAAATTGTGTATAAA
GCTAGAGAATTTATTATGCTCTGAATGTACGCTGCTACCGCCCTCCGCGC
CAGAATGGCCACCTCCCTCGTTGCCCGTCGTGGCTTTTCCACCACCCGCG
CTCAGCTCGGTAGCCCTTACCACTACGCCGAGGGCCCTCGCTCCAACATT
CCCTTCAACCCCCTGACCAAGTACTTCTTCTGGAGATACTGGGCCTTCAT
GG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004129 | cytochrome-c oxidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008460-T1.utr3p1 | KJC3_008460-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008460-T1.utr5p1 | KJC3_008460-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036636 |
| DBxref | InterPro:IPR004202 |
| DBxref | PFAM:PF02935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2127004..2127740 - |
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