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KJC3_008462-T1, KJC3_008462-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008462-T1
Unique NameKJC3_008462-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2133668..2135784+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008462-T1 ID=KJC3_008462-T1|Name=KJC3_008462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2117bp|location=Sequence derived from alignment at ch6:2133668..2135784+ (Aspergillus niger KJC3)
CCTTCATCCTCCATCCTGCACTCCGTCTTTCCCTTGCTTGTTCGCTTTCC
TTATCCTTTCCCCCTTTGATATTTTCCCTCGTGCTCCTGGCTGACCTTTG
GTCCCTCATCTCTGCTTTCCCCCCCGTCATCTCCCGTTGCCTCTCTTCCT
CCCCTCCCTCTCTCCCTTTGCCATCCAGCTGTTTGTGGTCATCATGAACA
GCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGAATACTCC
CGTCCTTCTCCCTCCCGTCCAAGTAAGCATCTCCCTGTCTTTTCCCAGGG
CATTCGATGATAATTCCCTTGCTATGTGACCTTTGATGACTGACTGATAT
CAGTGTCTACCCCCATTCACACTCCCAACAACCGCAAACGGAAAGCCGAC
GATGAGAATGATCACGATGGTCGAATGTCAGCATCACCTACCAACTCTCC
CGCCTTGACCCCGAGAACCCTTCCAGTCAACCGAAACATCAAGCGTGCTC
GTCCGAATGTTAGCGGACGGCCTCTCGCTCTCCCCCGACTGCTGGAGACC
TTGGACACAGACGCTCTTCGGGGCATCCTTCGGACCGTGTGTGAGCGTCA
TCCAGGTTTGGTTGATGAAGTGGTGCACACAGCACCTCGACCCAGCGTGG
CATCTGCCCTTCAAGTCCTTCGACATTACGAATCTGCCCTTCAGTCGTCG
TTCCCGCTCGGTGGCAACTCCGAATCAGATTATGCATACAATCGTGTCCG
ACAACCGCTGGGGAATCTTCTAGATGCTCTGAGCGACTTCACTCCACATT
TCCTACCCCCTCACGAGACGCAGTCGTCTGTTTCCTTGAGTTACCTGGAT
GGTGCGACCGACATAATTCACGCACTGCCCCGTTGGAGTACACCACAGAA
CAACCTCGAGCGGGATTCTGCATACGATGAGATCTGCAAGGCTTGGATTT
TGGTGATTCGGGAAGCAGCCAAGCGTGGTGGTGGAATTCAGTTACAATAC
GGTGGTTGGGATCAGAAGTTGGCGAAGCACAATCACAACTCGGGCGGTAA
ACTGCAGGCAGCCGTCAACGAGCTTGGTTCCAGTTTGGGATGGATGCACA
GACCGGATGCCCAAGGTTATGGAAGCCCAGGCGGCAATGACCTTGGGTCC
ATCCGGGAGCAACTCCTGTCGGGCACATACGGGCTCGGTACCCCCGTCAA
GGTTGGGCCATGGTGAATCCGGTCAGCCATCGACAACCGCAATCCGCCTT
TATCATCATTTCCAACCATAACAACAAATTCGCGACAACTTTTACCTGCC
CTCTAAAACTTAGGGCTACTGTCCGAATCCTCGACCGTGCACGTCCACGT
ATGATACGATCACGACTACCTACTGCATGAACTAGAGTTGAGGGTCACCT
TGGCGTTTACTGTGTGCAAGCAAACATATTCTTTTCGTTTTATTTTTATT
TCCTGCTTTTTTGTGTCATATCTCTGGATGCCAACCCCATGATTTCTAGA
TTGTCAGATCAAGGCCCAGGATCCGATCCTTCATTTCGTTCCAGACTTGC
ACCATGATCCTGCATTGTCACAGCCGAGCATGGTACATTCTTTCATTCCT
CGACGTTCTCTTTTTATCATTTCCTTTCACTTCTATGTGTTCCTCTTCTG
TCTCGGCGACATATACTCGAACCGCCGTGAGAAAAAACCGCTTCATTCTT
TCAGCCTAGCTGCATTTTCCTTGTCTTTGCCCTATCTTGTATACCCTTTA
CTATTTTCCCCTTAATATCACTGGTGTCAGGTATATTCTTCTTCGGGTTT
TGGGAGGCTTCTTTCATTTGGTGGGACGGGTTACACTACATGTCAGTAAA
GCATAAGAACAAAAGGGAGCATCATTGTCCAGATAGTCACAATACCACGA
GAACCAACCAACCTCCCGAGCCGTCTCGGGTTATCAACCAACTGATACTC
TCGTTACATTCTACTGCTCTGATAATTTATCCTCCTGCTAATGTTCCACA
TTTGAGAAACCTCCCTCGCACTGCAGAAATATATCCTGCCTAACCAACAA
CTCGGTAGAAACATTGGTATACATGCGCCTTTAAATCAGTCTCGCGCCAT
CGCCAACACTTGCAACC
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Coding sequence (CDS) from alignment at ch6:2133668..2135784+

>KJC3_008462-T1 ID=KJC3_008462-T1|Name=KJC3_008462-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch6:2133668..2135784+ (Aspergillus niger KJC3)
ATGAACAGCTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGA
ATACTCCCGTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTC
CCAACAACCGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGA
ATGTCAGCATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCC
AGTCAACCGAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTC
TCGCTCTCCCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGC
ATCCTTCGGACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGT
GCACACAGCACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGAC
ATTACGAATCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAA
TCAGATTATGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGA
TGCTCTGAGCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGT
CGTCTGTTTCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCA
CTGCCCCGTTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATA
CGATGAGATCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGC
GTGGTGGTGGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCG
AAGCACAATCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCT
TGGTTCCAGTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAA
GCCCAGGCGGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGC
ACATACGGGCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGAATGAACAG
CTTGGTGGCTACACCACCTGTGCCTCCTCATCACTTTTACGAATACTCCC
GTCCTTCTCCCTCCCGTCCAATGTCTACCCCCATTCACACTCCCAACAAC
CGCAAACGGAAAGCCGACGATGAGAATGATCACGATGGTCGAATGTCAGC
ATCACCTACCAACTCTCCCGCCTTGACCCCGAGAACCCTTCCAGTCAACC
GAAACATCAAGCGTGCTCGTCCGAATGTTAGCGGACGGCCTCTCGCTCTC
CCCCGACTGCTGGAGACCTTGGACACAGACGCTCTTCGGGGCATCCTTCG
GACCGTGTGTGAGCGTCATCCAGGTTTGGTTGATGAAGTGGTGCACACAG
CACCTCGACCCAGCGTGGCATCTGCCCTTCAAGTCCTTCGACATTACGAA
TCTGCCCTTCAGTCGTCGTTCCCGCTCGGTGGCAACTCCGAATCAGATTA
TGCATACAATCGTGTCCGACAACCGCTGGGGAATCTTCTAGATGCTCTGA
GCGACTTCACTCCACATTTCCTACCCCCTCACGAGACGCAGTCGTCTGTT
TCCTTGAGTTACCTGGATGGTGCGACCGACATAATTCACGCACTGCCCCG
TTGGAGTACACCACAGAACAACCTCGAGCGGGATTCTGCATACGATGAGA
TCTGCAAGGCTTGGATTTTGGTGATTCGGGAAGCAGCCAAGCGTGGTGGT
GGAATTCAGTTACAATACGGTGGTTGGGATCAGAAGTTGGCGAAGCACAA
TCACAACTCGGGCGGTAAACTGCAGGCAGCCGTCAACGAGCTTGGTTCCA
GTTTGGGATGGATGCACAGACCGGATGCCCAAGGTTATGGAAGCCCAGGC
GGCAATGACCTTGGGTCCATCCGGGAGCAACTCCTGTCGGGCACATACGG
GCTCGGTACCCCCGTCAAGGTTGGGCCATGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0071630nuclear protein quality control by the ubiquitin-proteasome system
GO:0031144proteasome localization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
STS1KJC3_008462Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008462-T1.utr5p1KJC3_008462-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008462-T1.exon1KJC3_008462-T1.exon1Aspergillus niger KJC3exon
KJC3_008462-T1.exon2KJC3_008462-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008462-T1.cdsKJC3_008462-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008462-T1.utr3p1KJC3_008462-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008462-T1KJC3_008462-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013868
DBxrefInterPro:IPR038422
DBxrefPFAM:PF08559
ProductTethering factor for nuclear proteasome sts1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2133668..2135784 +
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