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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2141999..2143448- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008465-T1 ID=KJC3_008465-T1|Name=KJC3_008465-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1450bp|location=Sequence derived from alignment at ch6:2141999..2143448- (Aspergillus niger KJC3) TATAAAATGCAATGCGAAGTTCAACCTGCGGACTTTATTCTCCGCGACCC
CAGAAAGCCCTGCGAGGATCTCCGGACTTTGCTGCCTGCCACTGTTTCCC
ACAAGTGCAGGCCTAATCCGTCGCGGCGATCATGGCATTCCGGCGTCCTT
TGATGCTGTCAACGACAGCATCAACGCCTTTCCTGTCCGTTGCGAGCCGC
ACCTCACGCCTGGGAGCCTCCCGATTCAGCACCACCATTCGGGCCTCTTC
CTCCAGCTCGACCTCAGCCCTAGCCTACAAGGCCCTTCATCGCCGGTCTC
CCCTCCCTCTCCCCGTCAACGATGCCTCGCCGCAATGGGACGCCCCCACG
GCCGTTTCGTCCATTCTCTACGAAACCCCTTCCGTCCCCACCAACCCTCC
CAAGCGCCATATCCTGAACTGTCTGGTGCAGAACGAGCCCGGTGTGTTGT
CCCGCGTGTCCGGTATCCTGGCTGCTCGCGGCTTCAACATCGACTCTCTC
GTCGTCTGCAACACCGAGGTCGAGGATCTGTCTCGTATGACCATCGTCTT
GCAGGGTCAGGACGGCGTCGTCGAGCAGGCTCGTCGTCAACTCGATGATC
TCGTCCCCGTCTGGGCCGTCCTCGATTACACTGACTCCGCCCTGGTGCAG
CGCGAACTCCTCCTCGCCAAGGTCAGCATCTTGGGCCCCGAGTTCTTCGA
GGAGTTGCTGCAGCACCACCGCGAAATCACCACCCCCGGTGAGCAGACTG
AGGGTCAGAAGGATAAGGCTGCGCAGGTTGCGAAGACCGAGTTCCACCCT
CGTAATCTGCCCCATTCTCAGGCTTTGAGACACAAGCATGAGCATTTGGA
TGCGATTACTCGCTTGACTCATCAGTTCGGTGGAAAGGTGCTGGATATCA
GTACCAACAACTGCATTGTTGAGGTGTAAGTTTCCTCCCTAACCAGCATG
AGTCATACGATTCTGGTTTTTCTTGGTGCTAATGATATGTGATATAGCTC
CGCCAAACCCTCCCGTATCGACTCCTTCATGAAGCTCATCGGCCCCTTCG
GTGTCCTCGAGTCCACCCGTACCGGTCTGATGGCTCTGCCCCGGTCTCCT
CTCTTCGAGCCTAGCGAGGAGATCGAGAAGGACGCCGCTGACGTTGTTGA
CGCCAGCACCCTTCCTCCCGGTTAAATGTAATCGTCTGTGCGCTTTTACT
TATCTATCCATTATCTATATCCCGCAATGTAAAAAGCACAACCACAATGT
ATTTCATCCATCTTTCTTCTGCAAGTCTAAGCTAAGCTTAATAATATGTT
GTAAATTCGCATGTTCAATGATTCATTCGAAGTGTTTTATGTACGTCTAT
ATCTTCGGCCTTCAAGCATTCTCGTTTGCGATATGGATAGGGTCATAAGC
AGTGGTAGTAATCGGCTGTAGAGCTGTGAATTGAACCTAATATTACTAGT
back to topCoding sequence (CDS) from alignment at ch6:2141999..2143448- >KJC3_008465-T1 ID=KJC3_008465-T1|Name=KJC3_008465-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch6:2141999..2143448- (Aspergillus niger KJC3) CTCCGCCAAACCCTCCCGTATCGACTCCTTCATGAAGCTCATCGGCCCCT TCGGTGTCCTCGAGTCCACCCGTACCGGTCTGATGGCTCTGCCCCGGTCT CCTCTCTTCGAGCCTAGCGAGGAGATCGAGAAGGACGCCGCTGACGTTGT TGACGCCAGCACCCTTCCTCCCGGTTAAATGGCATTCCGGCGTCCTTTGA TGCTGTCAACGACAGCATCAACGCCTTTCCTGTCCGTTGCGAGCCGCACC TCACGCCTGGGAGCCTCCCGATTCAGCACCACCATTCGGGCCTCTTCCTC CAGCTCGACCTCAGCCCTAGCCTACAAGGCCCTTCATCGCCGGTCTCCCC TCCCTCTCCCCGTCAACGATGCCTCGCCGCAATGGGACGCCCCCACGGCC GTTTCGTCCATTCTCTACGAAACCCCTTCCGTCCCCACCAACCCTCCCAA GCGCCATATCCTGAACTGTCTGGTGCAGAACGAGCCCGGTGTGTTGTCCC GCGTGTCCGGTATCCTGGCTGCTCGCGGCTTCAACATCGACTCTCTCGTC GTCTGCAACACCGAGGTCGAGGATCTGTCTCGTATGACCATCGTCTTGCA GGGTCAGGACGGCGTCGTCGAGCAGGCTCGTCGTCAACTCGATGATCTCG TCCCCGTCTGGGCCGTCCTCGATTACACTGACTCCGCCCTGGTGCAGCGC GAACTCCTCCTCGCCAAGGTCAGCATCTTGGGCCCCGAGTTCTTCGAGGA GTTGCTGCAGCACCACCGCGAAATCACCACCCCCGGTGAGCAGACTGAGG GTCAGAAGGATAAGGCTGCGCAGGTTGCGAAGACCGAGTTCCACCCTCGT AATCTGCCCCATTCTCAGGCTTTGAGACACAAGCATGAGCATTTGGATGC GATTACTCGCTTGACTCATCAGTTCGGTGGAAAGGTGCTGGATATCAGTA CCAACAACTGCATTGTTGAGGTCTCCGCCAAACCCTCCCGTATCGACTCC TTCATGAAGCTCATCGGCCCCTTCGGTGTCCTCGAGTCCACCCGTACCGG TCTGATGGCTCTGCCCCGGTCTCCTCTCTTCGAGCCTAGCGAGGAGATCG AGAAGGACGCCGCTGACGTTGTTGACGCCAGCACCCTTCCTCCCGGTTAA ATGGCATTCCGGCGTCCTTTGATGCTGTCAACGACAGCATCAACGCCTTT CCTGTCCGTTGCGAGCCGCACCTCACGCCTGGGAGCCTCCCGATTCAGCA CCACCATTCGGGCCTCTTCCTCCAGCTCGACCTCAGCCCTAGCCTACAAG GCCCTTCATCGCCGGTCTCCCCTCCCTCTCCCCGTCAACGATGCCTCGCC GCAATGGGACGCCCCCACGGCCGTTTCGTCCATTCTCTACGAAACCCCTT CCGTCCCCACCAACCCTCCCAAGCGCCATATCCTGAACTGTCTGGTGCAG AACGAGCCCGGTGTGTTGTCCCGCGTGTCCGGTATCCTGGCTGCTCGCGG CTTCAACATCGACTCTCTCGTCGTCTGCAACACCGAGGTCGAGGATCTGT CTCGTATGACCATCGTCTTGCAGGGTCAGGACGGCGTCGTCGAGCAGGCT CGTCGTCAACTCGATGATCTCGTCCCCGTCTGGGCCGTCCTCGATTACAC TGACTCCGCCCTGGTGCAGCGCGAACTCCTCCTCGCCAAGGTCAGCATCT TGGGCCCCGAGTTCTTCGAGGAGTTGCTGCAGCACCACCGCGAAATCACC ACCCCCGGTGAGCAGACTGAGGGTCAGAAGGATAAGGCTGCGCAGGTTGC GAAGACCGAGTTCCACCCTCGTAATCTGCCCCATTCTCAGGCTTTGAGAC ACAAGCATGAGCATTTGGATGCGATTACTCGCTTGACTCATCAGTTCGGT GGAAAGGTGCTGGATATCAGTACCAACAACTGCATTGTTGAGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0009082 | branched-chain amino acid biosynthetic process |
Vocabulary: Molecular Function
Term | Definition |
GO:1990610 | acetolactate synthase regulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008465-T1.utr3p1 | KJC3_008465-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008465-T1.utr5p1 | KJC3_008465-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09263MGE |
DBxref | InterPro:IPR039557 |
DBxref | InterPro:IPR027271 |
DBxref | InterPro:IPR004789 |
DBxref | InterPro:IPR019455 |
DBxref | InterPro:IPR002912 |
DBxref | PFAM:PF10369 |
DBxref | PFAM:PF13710 |
DBxref | PFAM:PF01842 |
Product | regulatory subunit |
Product | acetolactate synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2141999..2143448 - |
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