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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2141999..2143448- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008465-T1 ID=KJC3_008465-T1|Name=KJC3_008465-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1450bp|location=Sequence derived from alignment at ch6:2141999..2143448- (Aspergillus niger KJC3)
TATAAAATGCAATGCGAAGTTCAACCTGCGGACTTTATTCTCCGCGACCC
CAGAAAGCCCTGCGAGGATCTCCGGACTTTGCTGCCTGCCACTGTTTCCC
ACAAGTGCAGGCCTAATCCGTCGCGGCGATCATGGCATTCCGGCGTCCTT
TGATGCTGTCAACGACAGCATCAACGCCTTTCCTGTCCGTTGCGAGCCGC
ACCTCACGCCTGGGAGCCTCCCGATTCAGCACCACCATTCGGGCCTCTTC
CTCCAGCTCGACCTCAGCCCTAGCCTACAAGGCCCTTCATCGCCGGTCTC
CCCTCCCTCTCCCCGTCAACGATGCCTCGCCGCAATGGGACGCCCCCACG
GCCGTTTCGTCCATTCTCTACGAAACCCCTTCCGTCCCCACCAACCCTCC
CAAGCGCCATATCCTGAACTGTCTGGTGCAGAACGAGCCCGGTGTGTTGT
CCCGCGTGTCCGGTATCCTGGCTGCTCGCGGCTTCAACATCGACTCTCTC
GTCGTCTGCAACACCGAGGTCGAGGATCTGTCTCGTATGACCATCGTCTT
GCAGGGTCAGGACGGCGTCGTCGAGCAGGCTCGTCGTCAACTCGATGATC
TCGTCCCCGTCTGGGCCGTCCTCGATTACACTGACTCCGCCCTGGTGCAG
CGCGAACTCCTCCTCGCCAAGGTCAGCATCTTGGGCCCCGAGTTCTTCGA
GGAGTTGCTGCAGCACCACCGCGAAATCACCACCCCCGGTGAGCAGACTG
AGGGTCAGAAGGATAAGGCTGCGCAGGTTGCGAAGACCGAGTTCCACCCT
CGTAATCTGCCCCATTCTCAGGCTTTGAGACACAAGCATGAGCATTTGGA
TGCGATTACTCGCTTGACTCATCAGTTCGGTGGAAAGGTGCTGGATATCA
GTACCAACAACTGCATTGTTGAGGTGTAAGTTTCCTCCCTAACCAGCATG
AGTCATACGATTCTGGTTTTTCTTGGTGCTAATGATATGTGATATAGCTC
CGCCAAACCCTCCCGTATCGACTCCTTCATGAAGCTCATCGGCCCCTTCG
GTGTCCTCGAGTCCACCCGTACCGGTCTGATGGCTCTGCCCCGGTCTCCT
CTCTTCGAGCCTAGCGAGGAGATCGAGAAGGACGCCGCTGACGTTGTTGA
CGCCAGCACCCTTCCTCCCGGTTAAATGTAATCGTCTGTGCGCTTTTACT
TATCTATCCATTATCTATATCCCGCAATGTAAAAAGCACAACCACAATGT
ATTTCATCCATCTTTCTTCTGCAAGTCTAAGCTAAGCTTAATAATATGTT
GTAAATTCGCATGTTCAATGATTCATTCGAAGTGTTTTATGTACGTCTAT
ATCTTCGGCCTTCAAGCATTCTCGTTTGCGATATGGATAGGGTCATAAGC
AGTGGTAGTAATCGGCTGTAGAGCTGTGAATTGAACCTAATATTACTAGT
back to topCoding sequence (CDS) from alignment at ch6:2141999..2143448- >KJC3_008465-T1 ID=KJC3_008465-T1|Name=KJC3_008465-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch6:2141999..2143448- (Aspergillus niger KJC3)
CTCCGCCAAACCCTCCCGTATCGACTCCTTCATGAAGCTCATCGGCCCCT
TCGGTGTCCTCGAGTCCACCCGTACCGGTCTGATGGCTCTGCCCCGGTCT
CCTCTCTTCGAGCCTAGCGAGGAGATCGAGAAGGACGCCGCTGACGTTGT
TGACGCCAGCACCCTTCCTCCCGGTTAAATGGCATTCCGGCGTCCTTTGA
TGCTGTCAACGACAGCATCAACGCCTTTCCTGTCCGTTGCGAGCCGCACC
TCACGCCTGGGAGCCTCCCGATTCAGCACCACCATTCGGGCCTCTTCCTC
CAGCTCGACCTCAGCCCTAGCCTACAAGGCCCTTCATCGCCGGTCTCCCC
TCCCTCTCCCCGTCAACGATGCCTCGCCGCAATGGGACGCCCCCACGGCC
GTTTCGTCCATTCTCTACGAAACCCCTTCCGTCCCCACCAACCCTCCCAA
GCGCCATATCCTGAACTGTCTGGTGCAGAACGAGCCCGGTGTGTTGTCCC
GCGTGTCCGGTATCCTGGCTGCTCGCGGCTTCAACATCGACTCTCTCGTC
GTCTGCAACACCGAGGTCGAGGATCTGTCTCGTATGACCATCGTCTTGCA
GGGTCAGGACGGCGTCGTCGAGCAGGCTCGTCGTCAACTCGATGATCTCG
TCCCCGTCTGGGCCGTCCTCGATTACACTGACTCCGCCCTGGTGCAGCGC
GAACTCCTCCTCGCCAAGGTCAGCATCTTGGGCCCCGAGTTCTTCGAGGA
GTTGCTGCAGCACCACCGCGAAATCACCACCCCCGGTGAGCAGACTGAGG
GTCAGAAGGATAAGGCTGCGCAGGTTGCGAAGACCGAGTTCCACCCTCGT
AATCTGCCCCATTCTCAGGCTTTGAGACACAAGCATGAGCATTTGGATGC
GATTACTCGCTTGACTCATCAGTTCGGTGGAAAGGTGCTGGATATCAGTA
CCAACAACTGCATTGTTGAGGTCTCCGCCAAACCCTCCCGTATCGACTCC
TTCATGAAGCTCATCGGCCCCTTCGGTGTCCTCGAGTCCACCCGTACCGG
TCTGATGGCTCTGCCCCGGTCTCCTCTCTTCGAGCCTAGCGAGGAGATCG
AGAAGGACGCCGCTGACGTTGTTGACGCCAGCACCCTTCCTCCCGGTTAA
ATGGCATTCCGGCGTCCTTTGATGCTGTCAACGACAGCATCAACGCCTTT
CCTGTCCGTTGCGAGCCGCACCTCACGCCTGGGAGCCTCCCGATTCAGCA
CCACCATTCGGGCCTCTTCCTCCAGCTCGACCTCAGCCCTAGCCTACAAG
GCCCTTCATCGCCGGTCTCCCCTCCCTCTCCCCGTCAACGATGCCTCGCC
GCAATGGGACGCCCCCACGGCCGTTTCGTCCATTCTCTACGAAACCCCTT
CCGTCCCCACCAACCCTCCCAAGCGCCATATCCTGAACTGTCTGGTGCAG
AACGAGCCCGGTGTGTTGTCCCGCGTGTCCGGTATCCTGGCTGCTCGCGG
CTTCAACATCGACTCTCTCGTCGTCTGCAACACCGAGGTCGAGGATCTGT
CTCGTATGACCATCGTCTTGCAGGGTCAGGACGGCGTCGTCGAGCAGGCT
CGTCGTCAACTCGATGATCTCGTCCCCGTCTGGGCCGTCCTCGATTACAC
TGACTCCGCCCTGGTGCAGCGCGAACTCCTCCTCGCCAAGGTCAGCATCT
TGGGCCCCGAGTTCTTCGAGGAGTTGCTGCAGCACCACCGCGAAATCACC
ACCCCCGGTGAGCAGACTGAGGGTCAGAAGGATAAGGCTGCGCAGGTTGC
GAAGACCGAGTTCCACCCTCGTAATCTGCCCCATTCTCAGGCTTTGAGAC
ACAAGCATGAGCATTTGGATGCGATTACTCGCTTGACTCATCAGTTCGGT
GGAAAGGTGCTGGATATCAGTACCAACAACTGCATTGTTGAGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009082 | branched-chain amino acid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:1990610 | acetolactate synthase regulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008465-T1.utr3p1 | KJC3_008465-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008465-T1.utr5p1 | KJC3_008465-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263MGE |
| DBxref | InterPro:IPR039557 |
| DBxref | InterPro:IPR027271 |
| DBxref | InterPro:IPR004789 |
| DBxref | InterPro:IPR019455 |
| DBxref | InterPro:IPR002912 |
| DBxref | PFAM:PF10369 |
| DBxref | PFAM:PF13710 |
| DBxref | PFAM:PF01842 |
| Product | regulatory subunit |
| Product | acetolactate synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2141999..2143448 - |
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