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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2162654..2166454+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008471-T1 ID=KJC3_008471-T1|Name=KJC3_008471-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3801bp|location=Sequence derived from alignment at ch6:2162654..2166454+ (Aspergillus niger KJC3)
AGCAGGGATTGCTGGTGGTGAGATTTGAGTTTCCCTCTGCGCCTTCGCGC
GGCCGTTAAGGAATGAACGAACGGATCAGGATCAGAAGCAGGCTCACGGC
GCAGCAGTGATCCCATCCCATCCGATCCTCATCTGATCCCATCCTTTACC
CACTCGCCTGCCAGAGCGAACCCAGTTAAGAAAAGGGAAACCCCCTCCCA
AGCATCCCACGTCATCCACTATGTGACTAGGGATCGCTGGACCGACTCGC
TGAACGTTTCCAAAATTCCCTTTCCCTCGGTGCCCGTTCCCAGGTGCGAA
ACTGCGCCCCGGAAAGTTCGTAGCTGCTGCAAGCGTCTAGATTAGATCAG
CCTCACTTTTCGCAGCGCTCCTGCAAAAGGCAGTGGGTGCCTCTGACTAG
TCAGTCGCATGCTGGCTGTCTTCTAACCTTTCTTTCTCTCTCTCTCTGTC
TCGCTCTTGCTCTTGCTCTCTCTGTCTTTTTCCCTTCTCTGTCCCTACTA
TCTACTGCGATGCTACTGCGCCGCACTCTTTCCTTTTAGTTCTCCCTCCG
GTGGCTCGTGTGTCCAACCTGCTACGGGCTTGTAATCCCTCCTTCCTTAA
ATCTTGATTGCGTGCAGGGCCATCCTTCTCCTCAGGCTCCGGACAACCGT
TACTACTTACTACTAAGTACTCCCTACTTAGCAATAGGAGTATACTTACT
ACTGGACCTGCATGCCTGTTTCCCCGCATCATCATTGGCTATATCAACAC
ACCTGATATCCCGGTCTCTTTGTCAACCTGGTTGGACCCGATTTGTCAGA
GCAATATTGTCTACTGCTTCTCTGGTCGGCATTGAACTTCACTCTGCCAC
CTACCTTTGTTTGCTACGGTGATCCTCTTTCTTGTTGTTGTCGCGTAGCC
ATTGGACCTTGTTCCTTTCCATATATCTTTGCTGCCTGCGACGGTTCTCA
ACCCAGTTTCATCTGGTGTCCGGCCGTGCTTGCTGACTTGGCAAGGAGAC
GCAGATAAGGGAGAAAAAGAGGTGAACAAAAATAAAGAGGAAGAAGAAAG
GGAAAAAAAAGAAGGGAAAAAAAGGAAACTGGAATTCCGATTCGCAAAAC
AAGGAAATTGGCCCCAATCCCGAAAGGTTCACCTAGGGTCTTACTACTAT
CGAAACACTATTTTGACAAGCCCGGCGTCCACGATTGCCCGTTTTATGAT
CGGCATTGGCGATCGACGTCGTTGACTAACCTCGGGTGCGTACTATTTCT
CCCTCCCTCACCTGGGTTCCTGTCGACCGCAGGCAAGGACTGTTCGCAGG
GTCGCTGCGAAGGGGTCCCAATCCGAACCCGCCGTCGAGTATAGGGCTTG
CGGTGCCTTGCGTCCTATCGCCCAGGAAATGCCCGTGACCCCCACGTTCT
AATCGCTGTCTCCAGATTTCCTCTATCCATTCTTCCGAGTCTACCCCAGA
CCATCTCTCTTCCTGGACTGGTGCAGTTTCTCGTACCTCGTCTGCTCCGA
ACCCTTTCCGGGCGTTGGCAAGATCGGATGGAGATGGACTTTCAAAAAAC
GAAGGAGGCCCGGCGAGATACGCCGAGCAAGAAGGAAGAAAACTCCGAAT
GCCCCCTGGAAGCCTATGGAGGCAGTGGTCATGCGAAGGACTCGCCCAAG
AATGACTCTTTGGACCACCATCGCGATGCGAAGAGCACTCCGGACTCCGC
GAATATGCACCAGCGACGCCAGCCGGGTAAATATACCTACCACGACGGTG
TCGCCCCAACATTCCCTTCGCCTATCCAGGTGGCAACCCGGGTTCTGGCG
CCTTCTGCACGGGCAATGCACATCCCCCCTGCCCTGCCACTCAGCTTGGA
ACAACATCAACGGTTACTAGCTGCTAAAAGGTACCCGCCAGTGACCAAGA
GCACGCTGAGTGAACTGGACTTACCTTGTATTATGAGCAACATCAACCTC
CGGATGGACGCCAACTTTGACCGTGATCTACACTTCAAACCTGACCTGCA
GGGAGAAAAGGGCGAACGGAAACGAAAGGAGGCCCACGACTACTGGGAGG
CTATGGCTGATGAGATCACTATATACGCATTCGGTGCCGCACATGAGACG
AACGAGACAGGCAATGTAGGAGTCTCGGATAATCTATCGCGGACCTTTGA
GCCGCGGCTACCAGCCATGTTCGAGACCTTGCAAGACGTCCTGAAAACGC
TTGTCCCTGAGCGTGACCATCCGGCTGTGGTACAAAACCTTGAGGTAACA
CTCCTGATGCAGCAAATCCAGAAGGGTGTACTTGACATGGTGGGCGTGGC
AAGCTGGCTAGCGGCCCTGCTCAAAACGCACTGCGCTCCTATGCGCGATG
AATGGGCGGATAAGATGGTCAAGCAGATACGGTCAGGGTCAGAGTCGCAA
AACTCGCACCAAATCGTCGAAGGGCTCAAAACGCTGTTCGCAATCTTGGA
AGCGATGAAACTGGTAAGGCTTGGGCATGCTGGCCCCGGCGGCCACGCAT
ATTGGATGGGAATGCTAATGTGCCTCTAGGATGTTGCCAATCACCAAATC
CGTGCATTCCGCGTATTGCTCATCGAAGACACCGTTCCGTTCCTACAAGA
GTATTTCCGAGGCAAGATCGAGAGGGACAATTTTTGTGTGGAGACATCGC
GACGGTGGTATTTGGACCTCCGCGACCGCGAGTTGCGCCGCATGTCGAAG
CCTGCACAGATGGACGGGTTCTGGCCTATCTCCCTCTTGTTTGGTGGTAT
CACCGACTTTCTTCTGCAGTACCGGCGACCGGACAAGTTCCCCGAAACGT
TCGTTTTCGATTCGGACCGGCTGCGGCAGCTGCGGTCTTGTCTTCAAAAG
CTGATCAACCTCGATATCTGTTGGTTCATCTTCGAGTCGTACATCAACGC
ACAGAAACGGTATCTTTCGGCGCCCGCGCAGACATACGCTACCTTTCGCA
CCCGTATTGGATCGTTAATGGAAGAGAACGAGGACTATCCTCGAGGGGAT
GCTCGGTGGCTGAAAAGTGTGCGAAGCATTGCGCTGGAGATTGCGAGATT
CGCATGCGCCGCATGCTTTCAGGACGGATCGGTCTCGGATGATGTCATTG
TGCAAATCGAAATGGCACTGGAATGCCACCTCTCGAGCCCATCCAACTTG
TTCCAGTATTTTCAGAGCTCTCTTCGCGAGAAGCTGCTAGCGGCAACGTT
TACGACGGCGAAGAAGTACATGAGCATGTCGCCCTTGGCCATCTGCGAAT
CGCAGCGCAACTATCCGCCCTCGTCACTGACACAGCAGCACTATGATATC
GAGCGGATCGCCATGCGCCTTGCACACATGGGCGTGCTACACTGGAACGT
CTGGGCGCCGATTCTATACATGCGCGAGAGTGTGTCACCGGTTGACGTGG
CGAACAACGCGAGAACGGTCACTGACGTGGCGCGCTCGTCCACCCTGTGA
TTCAATCGCCTTGTTTCATTTGCTTTGAAGTTTTCTCTTCTGATGTACTC
TTGGATTTGGGATTACCAAGCGGAGTTTTGATCTTGGATTATTGATTGCA
GTTCAGCGAGTTTCATGCATGGTTTTCTGTTTTTTTTTTAATGGTCTGGC
GTCCACGTGGGGAAGGGCATACATATATACTACTTCATACTGTTTAATGG
GCCTGGTGTTAGGTTTCGGGCATTCGAAGGAAAACGGAGGATAGAGATGT
GCGATATGCAAAGAATGGTGGGATGCTTTTTGGCAACTTGGCAATTTATG
GTTACTCAAGATGTATTACTCCTAGATAAAATGTAGAGGTTTGATGCTGA
T back to topCoding sequence (CDS) from alignment at ch6:2162654..2166454+ >KJC3_008471-T1 ID=KJC3_008471-T1|Name=KJC3_008471-T1|organism=Aspergillus niger KJC3|type=CDS|length=3714bp|location=Sequence derived from alignment at ch6:2162654..2166454+ (Aspergillus niger KJC3)
ATGGAGATGGACTTTCAAAAAACGAAGGAGGCCCGGCGAGATACGCCGAG
CAAGAAGGAAGAAAACTCCGAATGCCCCCTGGAAGCCTATGGAGGCAGTG
GTCATGCGAAGGACTCGCCCAAGAATGACTCTTTGGACCACCATCGCGAT
GCGAAGAGCACTCCGGACTCCGCGAATATGCACCAGCGACGCCAGCCGGG
TAAATATACCTACCACGACGGTGTCGCCCCAACATTCCCTTCGCCTATCC
AGGTGGCAACCCGGGTTCTGGCGCCTTCTGCACGGGCAATGCACATCCCC
CCTGCCCTGCCACTCAGCTTGGAACAACATCAACGGTTACTAGCTGCTAA
AAGGTACCCGCCAGTGACCAAGAGCACGCTGAGTGAACTGGACTTACCTT
GTATTATGAGCAACATCAACCTCCGGATGGACGCCAACTTTGACCGTGAT
CTACACTTCAAACCTGACCTGCAGGGAGAAAAGGGCGAACGGAAACGAAA
GGAGGCCCACGACTACTGGGAGGCTATGGCTGATGAGATCACTATATACG
CATTCGGTGCCGCACATGAGACGAACGAGACAGGCAATGTAGGAGTCTCG
GATAATCTATCGCGGACCTTTGAGCCGCGGCTACCAGCCATGTTCGAGAC
CTTGCAAGACGTCCTGAAAACGCTTGTCCCTGAGCGTGACCATCCGGCTG
TGGTACAAAACCTTGAGGTAACACTCCTGATGCAGCAAATCCAGAAGGGT
GTACTTGACATGGTGGGCGTGGCAAGCTGGCTAGCGGCCCTGCTCAAAAC
GCACTGCGCTCCTATGCGCGATGAATGGGCGGATAAGATGGTCAAGCAGA
TACGGTCAGGGTCAGAGTCGCAAAACTCGCACCAAATCGTCGAAGGGCTC
AAAACGCTGTTCGCAATCTTGGAAGCGATGAAACTGGATGTTGCCAATCA
CCAAATCCGTGCATTCCGCGTATTGCTCATCGAAGACACCGTTCCGTTCC
TACAAGAGTATTTCCGAGGCAAGATCGAGAGGGACAATTTTTGTGTGGAG
ACATCGCGACGGTGGTATTTGGACCTCCGCGACCGCGAGTTGCGCCGCAT
GTCGAAGCCTGCACAGATGGACGGGTTCTGGCCTATCTCCCTCTTGTTTG
GTGGTATCACCGACTTTCTTCTGCAGTACCGGCGACCGGACAAGTTCCCC
GAAACGTTCGTTTTCGATTCGGACCGGCTGCGGCAGCTGCGGTCTTGTCT
TCAAAAGCTGATCAACCTCGATATCTGTTGGTTCATCTTCGAGTCGTACA
TCAACGCACAGAAACGGTATCTTTCGGCGCCCGCGCAGACATACGCTACC
TTTCGCACCCGTATTGGATCGTTAATGGAAGAGAACGAGGACTATCCTCG
AGGGGATGCTCGGTGGCTGAAAAGTGTGCGAAGCATTGCGCTGGAGATTG
CGAGATTCGCATGCGCCGCATGCTTTCAGGACGGATCGGTCTCGGATGAT
GTCATTGTGCAAATCGAAATGGCACTGGAATGCCACCTCTCGAGCCCATC
CAACTTGTTCCAGTATTTTCAGAGCTCTCTTCGCGAGAAGCTGCTAGCGG
CAACGTTTACGACGGCGAAGAAGTACATGAGCATGTCGCCCTTGGCCATC
TGCGAATCGCAGCGCAACTATCCGCCCTCGTCACTGACACAGCAGCACTA
TGATATCGAGCGGATCGCCATGCGCCTTGCACACATGGGCGTGCTACACT
GGAACGTCTGGGCGCCGATTCTATACATGCGCGAGAGTGTGTCACCGGTT
GACGTGGCGAACAACGCGAGAACGGTCACTGACGTGGCGCGCTCGTCCAC
CCTGTGAATGGAGATGGACTTTCAAAAAACGAAGGAGGCCCGGCGAGATA
CGCCGAGCAAGAAGGAAGAAAACTCCGAATGCCCCCTGGAAGCCTATGGA
GGCAGTGGTCATGCGAAGGACTCGCCCAAGAATGACTCTTTGGACCACCA
TCGCGATGCGAAGAGCACTCCGGACTCCGCGAATATGCACCAGCGACGCC
AGCCGGGTAAATATACCTACCACGACGGTGTCGCCCCAACATTCCCTTCG
CCTATCCAGGTGGCAACCCGGGTTCTGGCGCCTTCTGCACGGGCAATGCA
CATCCCCCCTGCCCTGCCACTCAGCTTGGAACAACATCAACGGTTACTAG
CTGCTAAAAGGTACCCGCCAGTGACCAAGAGCACGCTGAGTGAACTGGAC
TTACCTTGTATTATGAGCAACATCAACCTCCGGATGGACGCCAACTTTGA
CCGTGATCTACACTTCAAACCTGACCTGCAGGGAGAAAAGGGCGAACGGA
AACGAAAGGAGGCCCACGACTACTGGGAGGCTATGGCTGATGAGATCACT
ATATACGCATTCGGTGCCGCACATGAGACGAACGAGACAGGCAATGTAGG
AGTCTCGGATAATCTATCGCGGACCTTTGAGCCGCGGCTACCAGCCATGT
TCGAGACCTTGCAAGACGTCCTGAAAACGCTTGTCCCTGAGCGTGACCAT
CCGGCTGTGGTACAAAACCTTGAGGTAACACTCCTGATGCAGCAAATCCA
GAAGGGTGTACTTGACATGGTGGGCGTGGCAAGCTGGCTAGCGGCCCTGC
TCAAAACGCACTGCGCTCCTATGCGCGATGAATGGGCGGATAAGATGGTC
AAGCAGATACGGTCAGGGTCAGAGTCGCAAAACTCGCACCAAATCGTCGA
AGGGCTCAAAACGCTGTTCGCAATCTTGGAAGCGATGAAACTGGATGTTG
CCAATCACCAAATCCGTGCATTCCGCGTATTGCTCATCGAAGACACCGTT
CCGTTCCTACAAGAGTATTTCCGAGGCAAGATCGAGAGGGACAATTTTTG
TGTGGAGACATCGCGACGGTGGTATTTGGACCTCCGCGACCGCGAGTTGC
GCCGCATGTCGAAGCCTGCACAGATGGACGGGTTCTGGCCTATCTCCCTC
TTGTTTGGTGGTATCACCGACTTTCTTCTGCAGTACCGGCGACCGGACAA
GTTCCCCGAAACGTTCGTTTTCGATTCGGACCGGCTGCGGCAGCTGCGGT
CTTGTCTTCAAAAGCTGATCAACCTCGATATCTGTTGGTTCATCTTCGAG
TCGTACATCAACGCACAGAAACGGTATCTTTCGGCGCCCGCGCAGACATA
CGCTACCTTTCGCACCCGTATTGGATCGTTAATGGAAGAGAACGAGGACT
ATCCTCGAGGGGATGCTCGGTGGCTGAAAAGTGTGCGAAGCATTGCGCTG
GAGATTGCGAGATTCGCATGCGCCGCATGCTTTCAGGACGGATCGGTCTC
GGATGATGTCATTGTGCAAATCGAAATGGCACTGGAATGCCACCTCTCGA
GCCCATCCAACTTGTTCCAGTATTTTCAGAGCTCTCTTCGCGAGAAGCTG
CTAGCGGCAACGTTTACGACGGCGAAGAAGTACATGAGCATGTCGCCCTT
GGCCATCTGCGAATCGCAGCGCAACTATCCGCCCTCGTCACTGACACAGC
AGCACTATGATATCGAGCGGATCGCCATGCGCCTTGCACACATGGGCGTG
CTACACTGGAACGTCTGGGCGCCGATTCTATACATGCGCGAGAGTGTGTC
ACCGGTTGACGTGGCGAACAACGCGAGAACGGTCACTGACGTGGCGCGCT
CGTCCACCCTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008471-T1.utr3p1 | KJC3_008471-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008862 |
| DBxref | PFAM:PF05794 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2162654..2166454 + |
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