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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2174980..2176172+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008476-T1 ID=KJC3_008476-T1|Name=KJC3_008476-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1193bp|location=Sequence derived from alignment at ch6:2174980..2176172+ (Aspergillus niger KJC3)
ATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGGCTCTGCCAAATC
CCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACACACCAGAGCAGA
AGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACGGCGTACTACGAG
ATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGATCAAGAAGGCGTA
TCGCAAACTGAGTCTGATGACACACCCTGATAAGAACGGGTATGAGGGAG
CGGATGAGGCGTTTAAGTGTGAGTAGTGATTGGGATATTACTCTGATGAT
TGTGTGCGAATTATATTTCTAATGGTCATTCTGGAAAATCAGTGGTTTCG
CGCGCCTTTCAGGTCTTATCAGACCCCGAGAAGAAAGCCAAGTATGATAG
GTTTGGAGGCGATCCGGACAGCAGGTTCACCCCGAGTGCTGGTCCCTCGG
GCGCTTCGCCTTTTGGCGGCTTTGGCGGCGGTGGATTCCCCCGGTCTGCG
GGTGCTGGGGGTCCGATGTTCGAGGAGGAGATCTCGCCGGAAGAACTGTT
CCAGCGGTTCTTTAGCGGTGGGTTTGGCAATATGGGTGGTGGTTTCAGTC
CTTTTGGTATGGCTTCTTCTTGTCGGTGCGAGGGACTTGGCTAATCAGTG
TGTCTAGGTGGACCCCAGTTTGTTTTCAACATGGGCGGCGGTCCTGGTAT
CCGGGTTCATCAGTTTGGAGGTGCTCGCCCCCGGAGAAGGCCCCGTGAGG
CCAATGCTCGTACCGAACCTACACCCTCTTTGTGGGCTACCTTCCAGCAA
CTTCTCCCTCTTATTCTCCTCTTCGTGCTTCCGTGGATCTCGTCGCGATT
CTCCGGTTCTTCGACTCCGGCAGGCCCTTCGTACCGTTTTGACGCTGCCG
TGCCTCCCCACACAATGCATCGCACGACACCCAAGTTGAACGTGGACTAT
TATGTAAATCCCGGGGATGTGGAAGACTACAGCTCGCGGAAATTCCGGCA
ATTGGACCAGCGCGTGGAGGTGGACTACGTTACGAAACTACGGTACGAAT
GCGAAGCCGAACAACATAGGCGCGATCGCATGCTCCAGGACGCCCAGGGC
TGGTTCTTCCCGGACGTAGACAAGATCAAGGAAGCGAGAGCAATGGAGCT
TAAGAGTTGTCGGCGACTAGACTCCCTCAAGGGGAGGTACTGA back to topCoding sequence (CDS) from alignment at ch6:2174980..2176172+ >KJC3_008476-T1 ID=KJC3_008476-T1|Name=KJC3_008476-T1|organism=Aspergillus niger KJC3|type=CDS|length=3204bp|location=Sequence derived from alignment at ch6:2174980..2176172+ (Aspergillus niger KJC3)
ATGCCGTCCGCCACCGCGTCCGGGGTAGACAATGGAGGCTCTGCCAAATC
CCGCGAGCACAACCAGGGGAATCAGGATCGGAAATACACACCAGAGCAGA
AGGCGGCTGTGCTGAGGATACGGAAATGTTCGGCAACGGCGTACTACGAG
ATCCTGTCATTGGAGAAGAGCGCCTCCGACGGCGAGATCAAGAAGGCGTA
TCGCAAACTGAGTCTGATGACACACCCTGATAAGAACGGGTATGAGGGAG
CGGATGAGGCGTTTAAGTTGGTTTCGCGCGCCTTTCAGGTCTTATCAGAC
CCCGAGAAGAAAGCCAAGTATGATAGGTTTGGAGGCGATCCGGACAGCAG
GTTCACCCCGAGTGCTGGTCCCTCGGGCGCTTCGCCTTTTGGCGGCTTTG
GCGGCGGTGGATTCCCCCGGTCTGCGGGTGCTGGGGGTCCGATGTTCGAG
GAGGAGATCTCGCCGGAAGAACTGTTCCAGCGGTTCTTTAGCGGTGGGTT
TGGCAATATGGGTGGTGGTTTCAGTCCTTTTGGTGGACCCCAGTTTGTTT
TCAACATGGGCGGCGGTCCTGGTATCCGGGTTCATCAGTTTGGAGGTGCT
CGCCCCCGGAGAAGGCCCCGTGAGGCCAATGCTCGTACCGAACCTACACC
CTCTTTGTGGGCTACCTTCCAGCAACTTCTCCCTCTTATTCTCCTCTTCG
TGCTTCCGTGGATCTCGTCGCGATTCTCCGGTTCTTCGACTCCGGCAGGC
CCTTCGTACCGTTTTGACGCTGCCGTGCCTCCCCACACAATGCATCGCAC
GACACCCAAGTTGAACGTGGACTATTATGTAAATCCCGGGGATGTGGAAG
ACTACAGCTCGCGGAAATTCCGGCAATTGGACCAGCGCGTGGAGGTGGAC
TACGTTACGAAACTACGGTACGAATGCGAAGCCGAACAACATAGGCGCGA
TCGCATGCTCCAGGACGCCCAGGGCTGGTTCTTCCCGGACGTAGACAAGA
TCAAGGAAGCGAGAGCAATGGAGCTTAAGAGTTGTCGGCGACTAGACTCC
CTCAAGGGGAGGTACTGAATGCCGTCCGCCACCGCGTCCGGGGTAGACAA
TGGAGGCTCTGCCAAATCCCGCGAGCACAACCAGGGGAATCAGGATCGGA
AATACACACCAGAGCAGAAGGCGGCTGTGCTGAGGATACGGAAATGTTCG
GCAACGGCGTACTACGAGATCCTGTCATTGGAGAAGAGCGCCTCCGACGG
CGAGATCAAGAAGGCGTATCGCAAACTGAGTCTGATGACACACCCTGATA
AGAACGGGTATGAGGGAGCGGATGAGGCGTTTAAGTTGGTTTCGCGCGCC
TTTCAGGTCTTATCAGACCCCGAGAAGAAAGCCAAGTATGATAGGTTTGG
AGGCGATCCGGACAGCAGGTTCACCCCGAGTGCTGGTCCCTCGGGCGCTT
CGCCTTTTGGCGGCTTTGGCGGCGGTGGATTCCCCCGGTCTGCGGGTGCT
GGGGGTCCGATGTTCGAGGAGGAGATCTCGCCGGAAGAACTGTTCCAGCG
GTTCTTTAGCGGTGGGTTTGGCAATATGGGTGGTGGTTTCAGTCCTTTTG
GTGGACCCCAGTTTGTTTTCAACATGGGCGGCGGTCCTGGTATCCGGGTT
CATCAGTTTGGAGGTGCTCGCCCCCGGAGAAGGCCCCGTGAGGCCAATGC
TCGTACCGAACCTACACCCTCTTTGTGGGCTACCTTCCAGCAACTTCTCC
CTCTTATTCTCCTCTTCGTGCTTCCGTGGATCTCGTCGCGATTCTCCGGT
TCTTCGACTCCGGCAGGCCCTTCGTACCGTTTTGACGCTGCCGTGCCTCC
CCACACAATGCATCGCACGACACCCAAGTTGAACGTGGACTATTATGTAA
ATCCCGGGGATGTGGAAGACTACAGCTCGCGGAAATTCCGGCAATTGGAC
CAGCGCGTGGAGGTGGACTACGTTACGAAACTACGGTACGAATGCGAAGC
CGAACAACATAGGCGCGATCGCATGCTCCAGGACGCCCAGGGCTGGTTCT
TCCCGGACGTAGACAAGATCAAGGAAGCGAGAGCAATGGAGCTTAAGAGT
TGTCGGCGACTAGACTCCCTCAAGGGGAGGTACTGAATGCCGTCCGCCAC
CGCGTCCGGGGTAGACAATGGAGGCTCTGCCAAATCCCGCGAGCACAACC
AGGGGAATCAGGATCGGAAATACACACCAGAGCAGAAGGCGGCTGTGCTG
AGGATACGGAAATGTTCGGCAACGGCGTACTACGAGATCCTGTCATTGGA
GAAGAGCGCCTCCGACGGCGAGATCAAGAAGGCGTATCGCAAACTGAGTC
TGATGACACACCCTGATAAGAACGGGTATGAGGGAGCGGATGAGGCGTTT
AAGTTGGTTTCGCGCGCCTTTCAGGTCTTATCAGACCCCGAGAAGAAAGC
CAAGTATGATAGGTTTGGAGGCGATCCGGACAGCAGGTTCACCCCGAGTG
CTGGTCCCTCGGGCGCTTCGCCTTTTGGCGGCTTTGGCGGCGGTGGATTC
CCCCGGTCTGCGGGTGCTGGGGGTCCGATGTTCGAGGAGGAGATCTCGCC
GGAAGAACTGTTCCAGCGGTTCTTTAGCGGTGGGTTTGGCAATATGGGTG
GTGGTTTCAGTCCTTTTGGTGGACCCCAGTTTGTTTTCAACATGGGCGGC
GGTCCTGGTATCCGGGTTCATCAGTTTGGAGGTGCTCGCCCCCGGAGAAG
GCCCCGTGAGGCCAATGCTCGTACCGAACCTACACCCTCTTTGTGGGCTA
CCTTCCAGCAACTTCTCCCTCTTATTCTCCTCTTCGTGCTTCCGTGGATC
TCGTCGCGATTCTCCGGTTCTTCGACTCCGGCAGGCCCTTCGTACCGTTT
TGACGCTGCCGTGCCTCCCCACACAATGCATCGCACGACACCCAAGTTGA
ACGTGGACTATTATGTAAATCCCGGGGATGTGGAAGACTACAGCTCGCGG
AAATTCCGGCAATTGGACCAGCGCGTGGAGGTGGACTACGTTACGAAACT
ACGGTACGAATGCGAAGCCGAACAACATAGGCGCGATCGCATGCTCCAGG
ACGCCCAGGGCTGGTTCTTCCCGGACGTAGACAAGATCAAGGAAGCGAGA
GCAATGGAGCTTAAGAGTTGTCGGCGACTAGACTCCCTCAAGGGGAGGTA
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR015399 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF09320 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2174980..2176172 + |
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