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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2180782..2182242+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008478-T1 ID=KJC3_008478-T1|Name=KJC3_008478-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1461bp|location=Sequence derived from alignment at ch6:2180782..2182242+ (Aspergillus niger KJC3)
CATCCAACTGCCTCACCATCATAACATACAAAAAATACAATGGGCTCCGC
CCTCTCCATCCTCAACCACTTCCCCCCTTGGGAACACCTCATCCACCCAA
CGCCACAAACCTACACTCTGTTCCTCAACATCTTCCAATACTTTCCACTC
GTACGTCTACACCCACCCACATAAATCACATCACACCTCACCACCCCCAA
TCCCACTCATCGAAGTACTATACTAATCAAAGAAAACCCAGGTATCATTA
ATCCAATGGCTAACCTCCTACCACCCAGCGGGCAAAACCTCCCTCAAGCA
ATCCCCCCTAAACCTCCCCGGCCGCTGGGCCTGGTGCATCATGGAGATAG
TCTCCCCCATGACTCTGCTCTACTTACTCTACACCTTACCCCAGCAATAC
CCTTCCTCAACCTTCCCCACTGGCATTCCCACAAGTAACAAATTCCTCGC
TTTCCTATTCACCCTCCACTACACTAACCGCGCCATCATCTCCCCGTTCT
TCGCTGCCCCCAGCATCTCCCCTATTCATGTACTCATTGCGTCCTCGGCG
GTGGCATTTAATTGGTTAAATGCCGTTTGTATGGCCGGGTGGTTGGTTGG
GTATCCTTTACCTTCATCACCCTCATCTTATTCTTCTGCTGCTGCTGCTG
CCAGCGGTAGTACTACAGGAAGGACATGGCTAGCTCCGCTAGGCCTCACC
CTCTTCCTAGGCGGAATGGCAGGGAATATCTCTGCCGAGCGGACATTGTT
CAGGTTACGGCGAGAAGAGGCGCATCGAAAGAAGAAAGATGACTCTACTT
CTACTATCAAAGACACCACCACCACCAAAGATGATCCTAAGGGAAAAGGG
GATAACAAGAAGGACATCTACTCCAAAATATACACCATCCCGCCTCCCAC
CGGCCTCTTCACTTCCATTCTCTACCCGCATTACGTAGCAGAGTGGATTG
AATGGTTGGGGTTTGCTATCTTGGCTGCTGGTATGGTTACCAGCCCTTCT
TCTTCTCCTTCATCACCTTCAGTTGATGTTGGTGGTGGTTTTCATCTAGC
GCCGTGGCTTGTACCCGCTGCTAAACTAGCCAACTGGATGGGTGTACCGA
TGCCAGTGCCCGCGGTGGTGTTTTTGGTTAATGCGGTGTCGAATATGTTG
CCGCATGCGAGGTGGGGGAGGAAGTGGTATGTGGAGAAGTTTGGGGAGGG
GAGGGTTAAGGGACGGGGGGCGGTGGTGCCGTTTTTTAGGTGGTTGTAAT
TGATTTTCTGTATGTTATTGCTGGGGCATAGGGGATAAATGAGGGGTATG
AATGGGTGGTATTTGGGAAATGGTGGTGTTGATTGAAAGTGATGGGTTGT
GTATAATTAGTGCCGGGTGTATGTATGATAGATTGTGGTTGTGTATAGCA
TCATCATCATATTTCTCAGCTGGGAAATATTCAAAGGGACCAACAATCTC
CCCAAGAGGTC back to topCoding sequence (CDS) from alignment at ch6:2180782..2182242+ >KJC3_008478-T1 ID=KJC3_008478-T1|Name=KJC3_008478-T1|organism=Aspergillus niger KJC3|type=CDS|length=2238bp|location=Sequence derived from alignment at ch6:2180782..2182242+ (Aspergillus niger KJC3)
ATGGGCTCCGCCCTCTCCATCCTCAACCACTTCCCCCCTTGGGAACACCT
CATCCACCCAACGCCACAAACCTACACTCTGTTCCTCAACATCTTCCAAT
ACTTTCCACTCGTATCATTAATCCAATGGCTAACCTCCTACCACCCAGCG
GGCAAAACCTCCCTCAAGCAATCCCCCCTAAACCTCCCCGGCCGCTGGGC
CTGGTGCATCATGGAGATAGTCTCCCCCATGACTCTGCTCTACTTACTCT
ACACCTTACCCCAGCAATACCCTTCCTCAACCTTCCCCACTGGCATTCCC
ACAAGTAACAAATTCCTCGCTTTCCTATTCACCCTCCACTACACTAACCG
CGCCATCATCTCCCCGTTCTTCGCTGCCCCCAGCATCTCCCCTATTCATG
TACTCATTGCGTCCTCGGCGGTGGCATTTAATTGGTTAAATGCCGTTTGT
ATGGCCGGGTGGTTGGTTGGGTATCCTTTACCTTCATCACCCTCATCTTA
TTCTTCTGCTGCTGCTGCTGCCAGCGGTAGTACTACAGGAAGGACATGGC
TAGCTCCGCTAGGCCTCACCCTCTTCCTAGGCGGAATGGCAGGGAATATC
TCTGCCGAGCGGACATTGTTCAGGTTACGGCGAGAAGAGGCGCATCGAAA
GAAGAAAGATGACTCTACTTCTACTATCAAAGACACCACCACCACCAAAG
ATGATCCTAAGGGAAAAGGGGATAACAAGAAGGACATCTACTCCAAAATA
TACACCATCCCGCCTCCCACCGGCCTCTTCACTTCCATTCTCTACCCGCA
TTACGTAGCAGAGTGGATTGAATGGTTGGGGTTTGCTATCTTGGCTGCTG
GTATGGTTACCAGCCCTTCTTCTTCTCCTTCATCACCTTCAGTTGATGTT
GGTGGTGGTTTTCATCTAGCGCCGTGGCTTGTACCCGCTGCTAAACTAGC
CAACTGGATGGGTGTACCGATGCCAGTGCCCGCGGTGGTGTTTTTGGTTA
ATGCGGTGTCGAATATGTTGCCGCATGCGAGGTGGGGGAGGAAGTGGTAT
GTGGAGAAGTTTGGGGAGGGGAGGGTTAAGGGACGGGGGGCGGTGGTGCC
GTTTTTTAGGTGGTTGTAAATGGGCTCCGCCCTCTCCATCCTCAACCACT
TCCCCCCTTGGGAACACCTCATCCACCCAACGCCACAAACCTACACTCTG
TTCCTCAACATCTTCCAATACTTTCCACTCGTATCATTAATCCAATGGCT
AACCTCCTACCACCCAGCGGGCAAAACCTCCCTCAAGCAATCCCCCCTAA
ACCTCCCCGGCCGCTGGGCCTGGTGCATCATGGAGATAGTCTCCCCCATG
ACTCTGCTCTACTTACTCTACACCTTACCCCAGCAATACCCTTCCTCAAC
CTTCCCCACTGGCATTCCCACAAGTAACAAATTCCTCGCTTTCCTATTCA
CCCTCCACTACACTAACCGCGCCATCATCTCCCCGTTCTTCGCTGCCCCC
AGCATCTCCCCTATTCATGTACTCATTGCGTCCTCGGCGGTGGCATTTAA
TTGGTTAAATGCCGTTTGTATGGCCGGGTGGTTGGTTGGGTATCCTTTAC
CTTCATCACCCTCATCTTATTCTTCTGCTGCTGCTGCTGCCAGCGGTAGT
ACTACAGGAAGGACATGGCTAGCTCCGCTAGGCCTCACCCTCTTCCTAGG
CGGAATGGCAGGGAATATCTCTGCCGAGCGGACATTGTTCAGGTTACGGC
GAGAAGAGGCGCATCGAAAGAAGAAAGATGACTCTACTTCTACTATCAAA
GACACCACCACCACCAAAGATGATCCTAAGGGAAAAGGGGATAACAAGAA
GGACATCTACTCCAAAATATACACCATCCCGCCTCCCACCGGCCTCTTCA
CTTCCATTCTCTACCCGCATTACGTAGCAGAGTGGATTGAATGGTTGGGG
TTTGCTATCTTGGCTGCTGGTATGGTTACCAGCCCTTCTTCTTCTCCTTC
ATCACCTTCAGTTGATGTTGGTGGTGGTTTTCATCTAGCGCCGTGGCTTG
TACCCGCTGCTAAACTAGCCAACTGGATGGGTGTACCGATGCCAGTGCCC
GCGGTGGTGTTTTTGGTTAATGCGGTGTCGAATATGTTGCCGCATGCGAG
GTGGGGGAGGAAGTGGTATGTGGAGAAGTTTGGGGAGGGGAGGGTTAAGG
GACGGGGGGCGGTGGTGCCGTTTTTTAGGTGGTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008478-T1.utr5p1 | KJC3_008478-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008478-T1.utr3p1 | KJC3_008478-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001104 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2180782..2182242 + |
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