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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2204515..2205680- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008489-T1 ID=KJC3_008489-T1|Name=KJC3_008489-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1166bp|location=Sequence derived from alignment at ch6:2204515..2205680- (Aspergillus niger KJC3)
ATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACGT
ACGTTGTCCCCTGTCTTGAAGCTTGTTTTTAGTGTTCCGTTTTGTCTTTG
CGCGTGGAAAGATTTGGTCCGGTCGAGTCGTCGAGATTTCAAGCGTTTGA
GCGGATTACGGAAAGGCACAACTTGGATGGGAAGAAATGAGGAAAATGCC
GGAAAATTGGGTGGAATTGAAGAATTATATGTCGGGCGAAGGGTCTTTTT
GTCTGCAATGCGGAGGAAGGATTCTTTTACAACGGCCTGACAATTCTTGC
TTGTTTCATTGGACATGGATGAGATTGGGAACTGGGAACTGAAATCGTCC
GACTCGGCTGGATCAAATCGGGACATGCTGCTTTGATATCTCCAATCATG
GAGAATTTCGCGATTGGAAGACAGAATGAAAATCAAGGACAACCGGACTA
ACATGTCTTTGATAACTTGCAGAAAACCACCCCCCTCAACACCCCCAAGA
CCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTT
CGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTAT
CATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCA
AGAAGAGAGTACGTTTGCCAGTGCCTTTACTATTCGGGGGAAGGATATGG
TTGGGAGGTTCGATTGTTTGCTTGTCCGCTTGCTCGCTCGCTCGTTCGGT
TGTCTGCTTGGCTCCGGTCCGTTGTCTATCTGCATCGTGTTCTTCGACAT
CACTACGATTTCGCTTGATCGATAAGTACGACCTCAATGAGCGCTATGAC
CTGTTTATGTCTCAGAGAAGAGAACACAATCATTCGACAATCCATCCATC
ACCAAACGATCATGAATGCCATCCGGAGACGACAACTCAAACCAACGAAG
CAAGCAAAATACCAACGACAGAACCATCGAGCAACCAAGCAAACAAGCAA
GCAATTTGAACCACCGCCACATACCCCTCCAGCTCTTCACAAACCAAAAC
CACCTGCTAACATATCTTTTTTCTCTACACAGCTCGGTACCTTCGGCCGT
GGCAAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCG
CACTGGCGCTCACTAA back to topCoding sequence (CDS) from alignment at ch6:2204515..2205680- >KJC3_008489-T1 ID=KJC3_008489-T1|Name=KJC3_008489-T1|organism=Aspergillus niger KJC3|type=CDS|length=954bp|location=Sequence derived from alignment at ch6:2204515..2205680- (Aspergillus niger KJC3)
CTCGGTACCTTCGGCCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGT
CATCGCCGAGGCCCGCCGCACTGGCGCTCACTAAAAAACCACCCCCCTCA
ACACCCCCAAGACCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGC
ACGGCCTTCGTTCGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTA
TGAGCGTCGTATCATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTC
GTAAGCTCGCCAAGAAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTC
GGTCTGAACAAGGGCCACCTCGGTACCTTCGGCCGTGGCAAGAGAAAGGT
CGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTGGCGCTCACT
AAAAAACCACCCCCCTCAACACCCCCAAGACCCGGATCAGCCGTACCAAG
GGCCAGTCTTCCCGCCGCACGGCCTTCGTTCGTGAGATCGCCCGCGAGGT
TGTCGGTCTTGCCCCCTATGAGCGTCGTATCATCGAACTCCTGAGAAACA
CTCAGGACAAGCGCGCTCGTAAGCTCGCCAAGAAGAGAATGGCGCAAGAA
CGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACCTCGGTACCTTCGG
CCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCC
GCCGCACTGGCGCTCACTAAAAAACCACCCCCCTCAACACCCCCAAGACC
CGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTTCG
TGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTATCA
TCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCAAG
AAGAGAATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGG
CCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000509 |
| DBxref | InterPro:IPR038097 |
| DBxref | PFAM:PF01158 |
| Product | 60S ribosomal protein L36 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2204515..2205680 - |
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