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KJC3_008491-T1, KJC3_008491-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008491-T1
Unique NameKJC3_008491-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2212398..2213938-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008491-T1 ID=KJC3_008491-T1|Name=KJC3_008491-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1541bp|location=Sequence derived from alignment at ch6:2212398..2213938- (Aspergillus niger KJC3)
TGGATCTCCACGCCAAGACTGGCGGGTCTGGATTTTCCTCCGGCCGCTTC
GATTGGTACAACTACTGCCATCCTCATCAACATCAACATCAACATCTACC
CGCAATATCCCGGAGTTCTCTATTCTCGGACCTAGAGTCTTCTACTCTCG
CAGTCACCCTATCACGCTCCGAATTCAGGTGTTCGCTTGCTCGGCTCATT
ACAAACTATGGCCTCCCAATCTGATAAACAACCATCCTCATCCGATCAAA
CCAACCCCAATGCCTGGGAGCGGGTGGAGCGGAAATTCACCAGGTATGTT
TAAACTTTTACCTCTGTTTCTGATTCTCACCTCAATTTTCCCTGTTGTTT
TGGTGAGCGAGCGTAATCATGTGCTCGAATCTCCAGTTTCTTGCTTTGGG
TTCTCTCGTGTTGTTTCAATGATACCATTGGTTTCCGCCCGGAGGGGGGG
AGAAGACAAGGTGGATCTGCTAGCACATGCTAGCTAGTTGTAGATAATAG
GTCATGACTGACAATCATCTGTCGTCTCTAGCAAAACGGCAAGCGAATAC
TTTGACCCATGTCAAGATTTCGCAGATCGAAGCCTAAAGTGCATGAAGCG
CAATGGTTTTGATAAGGAGATGTGCTCGGATTATTTCCAGTAAGTTCACC
AATTTATGAAATACATCACCTCGTCTTTTCTCAGTCGCTACGACTGGTTG
GCTTGGTGCCATTTGTCTCTGATGAGTTACATATGCTGCCGTCTTATACC
TGTCAAGTGGCTGAAGTAGCCATTTTTGGTGTTACATTACTTTGTTCGAA
TTATCCATCCCTTAGACTGACCAGGGACTATTCAGGGCTTATCGAGATTG
TAAGAAGGAATGGGTGAGTACAGACCTTTGGGCTTGCTTTCCTGCGGCCT
TACCACTCCCTTGCTGAAATCAACGCTCGGGAAACTGATTGCGCGCCCAT
GGAGGAAATTCATGACATTGCTTTCAGCTATAGATGAACTAACGCCTTTC
TTCAGTTGACACAAAAGAAGCTTGGCTCGTCTGCAGCCAAACGCTGATTT
GAGGGCTTCTTGGGGCTCTCTATACTGCACTGATTGCATTTGGAACTGCC
ACCATCATAATCGCCCTGTTATCAGGCCTGTGTTTATCAGCCTTTCAGTA
TCGTCTGTGCCAGAACCATGCTCTTACTTATCTCTTGCTCCCATTGGCGA
GCTATATTTTTCGTTCAGATCTAAGGCATTAGCATGGATGCTACTTGTCA
GCGGTCCGGGTTATGCACCAGCAAGCCGCCTATGTGTTCAGTGACTTGAT
AAAAACTGTATTTCCACCACTAGCTGCTGCTATCGGGAAAGCGATTACTG
TTTCTGTCATGGAATACGTGCTATCCTTCACTATATTCCAGCTCGTCTGT
ACAGTGAAGGAGGCCTCATTTTGGCATGGTCTTGCCTGGCGTTCTCAATT
CGTGACTTCAGTCATTTGTCTAGTCTCTGTTCTCTGTATATTATATGTGT
CACTATTATAATGATCCGGTTTCCAAATCTTTTCAGCTCAC
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Coding sequence (CDS) from alignment at ch6:2212398..2213938-

>KJC3_008491-T1 ID=KJC3_008491-T1|Name=KJC3_008491-T1|organism=Aspergillus niger KJC3|type=CDS|length=1056bp|location=Sequence derived from alignment at ch6:2212398..2213938- (Aspergillus niger KJC3)
TTGACACAAAAGAAGCTTGGCTCGTCTGCAGCCAAACGCTGAGGCTTATC
GAGATTGTAAGAAGGAATGGCAAAACGGCAAGCGAATACTTTGACCCATG
TCAAGATTTCGCAGATCGAAGCCTAAAGTGCATGAAGCGCAATGGTTTTG
ATAAGGAGATGTGCTCGGATTATTTCCAATGGCCTCCCAATCTGATAAAC
AACCATCCTCATCCGATCAAACCAACCCCAATGCCTGGGAGCGGGTGGAG
CGGAAATTCACCAGTTGACACAAAAGAAGCTTGGCTCGTCTGCAGCCAAA
CGCTGAGGCTTATCGAGATTGTAAGAAGGAATGGCAAAACGGCAAGCGAA
TACTTTGACCCATGTCAAGATTTCGCAGATCGAAGCCTAAAGTGCATGAA
GCGCAATGGTTTTGATAAGGAGATGTGCTCGGATTATTTCCAATGGCCTC
CCAATCTGATAAACAACCATCCTCATCCGATCAAACCAACCCCAATGCCT
GGGAGCGGGTGGAGCGGAAATTCACCAGTTGACACAAAAGAAGCTTGGCT
CGTCTGCAGCCAAACGCTGAGGCTTATCGAGATTGTAAGAAGGAATGGCA
AAACGGCAAGCGAATACTTTGACCCATGTCAAGATTTCGCAGATCGAAGC
CTAAAGTGCATGAAGCGCAATGGTTTTGATAAGGAGATGTGCTCGGATTA
TTTCCAATGGCCTCCCAATCTGATAAACAACCATCCTCATCCGATCAAAC
CAACCCCAATGCCTGGGAGCGGGTGGAGCGGAAATTCACCAGTTGACACA
AAAGAAGCTTGGCTCGTCTGCAGCCAAACGCTGAGGCTTATCGAGATTGT
AAGAAGGAATGGCAAAACGGCAAGCGAATACTTTGACCCATGTCAAGATT
TCGCAGATCGAAGCCTAAAGTGCATGAAGCGCAATGGTTTTGATAAGGAG
ATGTGCTCGGATTATTTCCAATGGCCTCCCAATCTGATAAACAACCATCC
TCATCCGATCAAACCAACCCCAATGCCTGGGAGCGGGTGGAGCGGAAATT
CACCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX23KJC3_008491Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008491-T1KJC3_008491-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008491-T1.cdsKJC3_008491-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008491-T1.utr3p1KJC3_008491-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008491-T1.exon4KJC3_008491-T1.exon4Aspergillus niger KJC3exon
KJC3_008491-T1.exon3KJC3_008491-T1.exon3Aspergillus niger KJC3exon
KJC3_008491-T1.exon2KJC3_008491-T1.exon2Aspergillus niger KJC3exon
KJC3_008491-T1.exon1KJC3_008491-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008491-T1.utr5p1KJC3_008491-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009069
ProductMitochondrial copper homeostasis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2212398..2213938 -
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