You are here

KJC3_008493-T1, KJC3_008493-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008493-T1
Unique NameKJC3_008493-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2216693..2217446+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008493-T1 ID=KJC3_008493-T1|Name=KJC3_008493-T1|organism=Aspergillus niger KJC3|type=mRNA|length=754bp|location=Sequence derived from alignment at ch6:2216693..2217446+ (Aspergillus niger KJC3)
ATGGACTTCGAACTGGGCCACGTAAACATTTCTGGTCACAATGAAGAGGA GAAGCATGAAGCCGTGAAGGCAGCCGGGGTATTGGGTAAGGGTATTGCCG TGAAGCCCAGCAACGATGATGCCATAGTCGACTGGCACACTGACAGCTAC CCCTTCGTTTGTGTGACAATGCTATCCGACTGTACCAATATGATCGGTGG AGAAACGGCCCTTAGAACGGGCAACGGCGATATTGTCAAAGTCAGGGGAC CGCAGAAGGTAAGTACATGACAATTGGATCTTAATAGCTCAAGCTTATGA GTTGTCCTAGGGTTCGGCAGTCATCCTACAAGGCCGGTATATCGAGCACA AAGCTCTCCGTGCTTTTGGGGCGACCGAGCGAATTACCATGGTGACTTCC TTCCGGCCTCGGGCTTCGTCCATCAAGGACGACACCGTGCTTACCACCGT CCGCCCAATATCGGACCTCAATGAATTGTATCATCAGTTCACTGAATATC GATTCGAAATCCTTGGCGATCGTCTCCGTGACGTCAATAAACTTATGCGA GACCAAAAGCGAGCCCGGCGCACTTTTGATACGCGTGCTGCGAAACTCTT CATTCGTGAGCAGATCGATTTTTTGGAACACATGAATAAAGAGATCGTGG ACGACGAAAAAGTGATCAAGGGAGTGATTGATGATAGTCACCTTGTGTCA GAGGATCTGAAGCTAGAGCGTTCCCGGAAGCGGGCGCTCGCAGATGTCGA GTAG
back to top

Coding sequence (CDS) from alignment at ch6:2216693..2217446+

>KJC3_008493-T1 ID=KJC3_008493-T1|Name=KJC3_008493-T1|organism=Aspergillus niger KJC3|type=CDS|length=1404bp|location=Sequence derived from alignment at ch6:2216693..2217446+ (Aspergillus niger KJC3)
ATGGACTTCGAACTGGGCCACGTAAACATTTCTGGTCACAATGAAGAGGA
GAAGCATGAAGCCGTGAAGGCAGCCGGGGTATTGGGTAAGGGTATTGCCG
TGAAGCCCAGCAACGATGATGCCATAGTCGACTGGCACACTGACAGCTAC
CCCTTCGTTTGTGTGACAATGCTATCCGACTGTACCAATATGATCGGTGG
AGAAACGGCCCTTAGAACGGGCAACGGCGATATTGTCAAAGTCAGGGGAC
CGCAGAAGGGTTCGGCAGTCATCCTACAAGGCCGGTATATCGAGCACAAA
GCTCTCCGTGCTTTTGGGGCGACCGAGCGAATTACCATGGTGACTTCCTT
CCGGCCTCGGGCTTCGTCCATCAAGGACGACACCGTGCTTACCACCGTCC
GCCCAATATCGGACCTCAATGAATTGTATCATCAGTTCACTGAATATCGA
TTCGAAATCCTTGGCGATCGTCTCCGTGACGTCAATAAACTTATGCGAGA
CCAAAAGCGAGCCCGGCGCACTTTTGATACGCGTGCTGCGAAACTCTTCA
TTCGTGAGCAGATCGATTTTTTGGAACACATGAATAAAGAGATCGTGGAC
GACGAAAAAGTGATCAAGGGAGTGATTGATGATAGTCACCTTGTGTCAGA
GGATCTGAAGCTAGAGCGTTCCCGGAAGCGGGCGCTCGCAGATGTCGAGT
AGATGGACTTCGAACTGGGCCACGTAAACATTTCTGGTCACAATGAAGAG
GAGAAGCATGAAGCCGTGAAGGCAGCCGGGGTATTGGGTAAGGGTATTGC
CGTGAAGCCCAGCAACGATGATGCCATAGTCGACTGGCACACTGACAGCT
ACCCCTTCGTTTGTGTGACAATGCTATCCGACTGTACCAATATGATCGGT
GGAGAAACGGCCCTTAGAACGGGCAACGGCGATATTGTCAAAGTCAGGGG
ACCGCAGAAGGGTTCGGCAGTCATCCTACAAGGCCGGTATATCGAGCACA
AAGCTCTCCGTGCTTTTGGGGCGACCGAGCGAATTACCATGGTGACTTCC
TTCCGGCCTCGGGCTTCGTCCATCAAGGACGACACCGTGCTTACCACCGT
CCGCCCAATATCGGACCTCAATGAATTGTATCATCAGTTCACTGAATATC
GATTCGAAATCCTTGGCGATCGTCTCCGTGACGTCAATAAACTTATGCGA
GACCAAAAGCGAGCCCGGCGCACTTTTGATACGCGTGCTGCGAAACTCTT
CATTCGTGAGCAGATCGATTTTTTGGAACACATGAATAAAGAGATCGTGG
ACGACGAAAAAGTGATCAAGGGAGTGATTGATGATAGTCACCTTGTGTCA
GAGGATCTGAAGCTAGAGCGTTCCCGGAAGCGGGCGCTCGCAGATGTCGA
GTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008493KJC3_008493Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008493-T1.exon1KJC3_008493-T1.exon1Aspergillus niger KJC3exon
KJC3_008493-T1.exon2KJC3_008493-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008493-T1.cdsKJC3_008493-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008493-T1KJC3_008493-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2216693..2217446 +