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KJC3_008496-T1, KJC3_008496-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008496-T1
Unique NameKJC3_008496-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2224460..2225507+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008496-T1 ID=KJC3_008496-T1|Name=KJC3_008496-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1048bp|location=Sequence derived from alignment at ch6:2224460..2225507+ (Aspergillus niger KJC3)
CTTTCCTCGAGAATAAACACACCCTGAGATACTACAAACATGTAAGTATG
CCGCAATATATATCGATGGACACGACGCTCACTCATCCTCGGTCACAGGG
AGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCTCC
AAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGAC
AAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAG
ACACAGGTTCGTTGCAGCTTCCCCAGTGATCGGAGACGCGGAACCGCCAT
AAACTAGATAGCTAACCCGGAGCTCAATTAGTACAATTCGCGGAGTACAT
CCAAGCCAACATCCAACTATACACGATGCGGAACGATACGGAGCTGGGCC
CGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGG
TCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCAT
CACGCAGAAGCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTC
CCGTACCATATGCTGCTCACGGCTATGCGCAGTAAGTGTGGGCGCTGAGT
AACAGCGGTCTCAAGCTGTTGGGATTCATGCTAAGGTGCTCTAGATACTA
CTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAG
AAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTA
CCGATCGATTACAAGGGTGTATGTTACCAGAGTCAATAGGCCCCGCAGTG
CGAGCGAGTATGGGTAGCTGACAACTTCTAGGTTCTGGTGAAGATCGTGA
CAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAG
AGTGCCTAATGTGATGTATCATACCAATGATTGTCTTATGTTTTCGGTTT
CACGGGACTTGGGTTTCAAGAGAAGATCGGGTTGCATGGCAGGGTATTTT
CCATGACTTTGACCGAGATAAAGTCTCTTCTATTATTTAGCTAAAGTA
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Coding sequence (CDS) from alignment at ch6:2224460..2225507+

>KJC3_008496-T1 ID=KJC3_008496-T1|Name=KJC3_008496-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch6:2224460..2225507+ (Aspergillus niger KJC3)
ATGGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGC
CTCCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACA
AGACAAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCG
GGAGACACAGTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATA
CACGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTG
TCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTC
AACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATA
CTGGATTGATTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACG
GCTATGCGCAATACTACTGCCTGTCCACTCTCGATAAACACCACCACCCC
GACATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGA
ATTGAAGCGCAGACTACCGATCGATTACAAGGGTGTTCTGGTGAAGATCG
TGACAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTC
AAGAGTGCCTAAATGGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGT
CATTCTGGCGGCCTCCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAG
CCGAAGATGACAAGACAAAGCAGCTGAATGAACACAACCTTATGGCCTTC
TCGGGAGAGGCGGGAGACACAGTACAATTCGCGGAGTACATCCAAGCCAA
CATCCAACTATACACGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGG
TTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAAT
CCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAA
GCCTCATCTATACTGGATTGATTATCTGGCATCATTGGCTCCCGTACCAT
ATGCTGCTCACGGCTATGCGCAATACTACTGCCTGTCCACTCTCGATAAA
CACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAAT
GTGCACAGACGAATTGAAGCGCAGACTACCGATCGATTACAAGGGTGTTC
TGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTACCATTCGATAAT
GACAGGATTGTCAAGAGTGCCTAAATGGAGGTTCTACTCGGCATCACTGG
AAAGGACTTCGTCATTCTGGCGGCCTCCAAAGCTGCCATGAGAGGCCCCA
CCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTGAATGAACACAAC
CTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACAATTCGCGGAGTA
CATCCAAGCCAACATCCAACTATACACGATGCGGAACGATACGGAGCTGG
GCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATGGCGCGGAGTCTG
CGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGGAGGTGTCGATCC
CATCACGCAGAAGCCTCATCTATACTGGATTGATTATCTGGCATCATTGG
CTCCCGTACCATATGCTGCTCACGGCTATGCGCAATACTACTGCCTGTCC
ACTCTCGATAAACACCACCACCCCGACATCTCGCTCGAAGAAGGAATGAA
GCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGACTACCGATCGATT
ACAAGGGTGTTCTGGTGAAGATCGTGACAAAGGACGGCGTGCAAGAAGTA
CCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAATGGAGGTTCTACT
CGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCTCCAAAGCTGCCA
TGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAGACAAAGCAGCTG
AATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGGAGACACAGTACA
ATTCGCGGAGTACATCCAAGCCAACATCCAACTATACACGATGCGGAACG
ATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTCCGGGGAGAAATG
GCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAACCTCCTGCTGGG
AGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACTGGATTGATTATC
TGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGCTATGCGCAATAC
TACTGCCTGTCCACTCTCGATAAACACCACCACCCCGACATCTCGCTCGA
AGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAATTGAAGCGCAGAC
TACCGATCGATTACAAGGGTGTTCTGGTGAAGATCGTGACAAAGGACGGC
GTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAAGAGTGCCTAAAT
GGAGGTTCTACTCGGCATCACTGGAAAGGACTTCGTCATTCTGGCGGCCT
CCAAAGCTGCCATGAGAGGCCCCACCATCCTCAAAGCCGAAGATGACAAG
ACAAAGCAGCTGAATGAACACAACCTTATGGCCTTCTCGGGAGAGGCGGG
AGACACAGTACAATTCGCGGAGTACATCCAAGCCAACATCCAACTATACA
CGATGCGGAACGATACGGAGCTGGGCCCGAGTGCGGTTGCCAGCTTTGTC
CGGGGAGAAATGGCGCGGAGTCTGCGGTCTCGGAATCCCTACACTGTCAA
CCTCCTGCTGGGAGGTGTCGATCCCATCACGCAGAAGCCTCATCTATACT
GGATTGATTATCTGGCATCATTGGCTCCCGTACCATATGCTGCTCACGGC
TATGCGCAATACTACTGCCTGTCCACTCTCGATAAACACCACCACCCCGA
CATCTCGCTCGAAGAAGGAATGAAGCTCTTGGAAATGTGCACAGACGAAT
TGAAGCGCAGACTACCGATCGATTACAAGGGTGTTCTGGTGAAGATCGTG
ACAAAGGACGGCGTGCAAGAAGTACCATTCGATAATGACAGGATTGTCAA
GAGTGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCB4KJC3_008496Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008496-T1KJC3_008496-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008496-T1.utr5p1KJC3_008496-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008496-T1.exon1KJC3_008496-T1.exon1Aspergillus niger KJC3exon
KJC3_008496-T1.exon2KJC3_008496-T1.exon2Aspergillus niger KJC3exon
KJC3_008496-T1.exon3KJC3_008496-T1.exon3Aspergillus niger KJC3exon
KJC3_008496-T1.exon4KJC3_008496-T1.exon4Aspergillus niger KJC3exon
KJC3_008496-T1.exon5KJC3_008496-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008496-T1.cdsKJC3_008496-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008496-T1.utr3p1KJC3_008496-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263WSS
NoteMEROPS:MER0002676
DBxrefInterPro:IPR035206
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefPFAM:PF00227
ProductProbable proteasome subunit beta type-4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2224460..2225507 +
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