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KJC3_008499-T2, KJC3_008499-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008499-T2
Unique NameKJC3_008499-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2231038..2234549+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008499-T2 ID=KJC3_008499-T2|Name=KJC3_008499-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3512bp|location=Sequence derived from alignment at ch6:2231038..2234549+ (Aspergillus niger KJC3)
AAATGGTAAGTGTCAGTCATCTAGGCGGCTCCGGCGTCTGGGGCGGTTAG
ATCACGAGCTAGCGGGGTTCCACCAGCTCGTCAAACAAAGCAAACATCTC
GAAAAAAGACCCAAAAGTTTCGGTGCGACGGCGACTCGGACGGCGGTACG
CAACTGCCAATTTCTTTGAAAGCGCGGATTTGTTCTGTCGTATGATGGCG
CGGTAGATTCCTAGACTTCTGGTTGTTGAGAAAATTACCCCATCATGTCC
AAAGCCGTGGTTAAGACGACCTTCGAGGCGTCTCGAACTCTTCGTCCCAT
CTACACCGGAGGAAGCACTGCGCTGGATGCTAGTGGTCGTCTATTGGCGA
CTTGCATTGGCGAGGATGCTCTCGTGGTCGACCTTGAGACCGGTGACCAA
GTTGCCAGCCTTGAAGGGGTAAGCTTCTCTCATACATTTAGAAGTCGCAA
ATGGCTAACCCGGATGTTTTAGGACGGCGAGATAATCACTAGCTTGGCCA
GTATGCAACTCTCTCTCTCTCTCTCTTTTGCTTCCCCTTCCTACGCTAGC
TAGGAGGTATGTTCTGACTGCGCTTAGTTTCTCCATCGGCTTCGCATGTC
GTTCTCTGTTCGCGCTCGATGTCCATGCGCATCTACTCTCTGACGCCTTT
CGATGAAAACACACGAACCGTCGAGGCCAAACTAGCTAGAAGCTTGAAAC
CTCACACAGCCCCTGTTGTCACCACTGCGATCGATCCCACGGGTACTCTC
CTAGCAACTGGCGCTGCGGATGGTTCTATTAAGGTTTGGGATATTAGGGG
TGGATATATCACACATACTTTCCATGGTCATGGTGGTGTTATTTCGGCGC
TGTGTTTCTTCCAGGTACCTTACCAGGACAACGACAAAGCATCATCAAAG
AAGAAGAAGAAGGGACCCAAGGGTAAAACCCATGACTCTGATGAGGATGA
GGACATGGATGAAGTAGCCGATTCGATTGGCGCTTTTCGACTCGCTTCGG
GTGATGAGGAGGGTATGGTCCGCGTCTGGGATTTGAACAAGAGAAAGCCT
ATCGCATCACTGGAATCGCACGTCTCCGTTGTACGGAGTCTTTCGTACTC
GCCCGCAGAGAATGCGCTGCTCTCTGCAGGCCGCGATAAGACTGTCATTG
TGTGGGATGTGCGGACTTTCAAGACGCGCCGTGTCATCCCTGTCCTTGAG
AGCGTGGAAGCAGCTTGCTTTGTTGCTGACAGCGAATTGTGCTTGGTGGG
AGGAGAGAACGGCCGTTTGCGTGTGTGGGACTGCAACCGCGGAGGAGAGG
TTACTCACGAGCAAGAAGCTGCGGCCGAGTTCGAGGCCGTGGTGGCGATC
CAGTATTCCGCAGGCATGTCATTCGCAATGACCGTGCATGCTGACCAGAC
CATCCGACTGCACTCACTTCAGCCACTCGCCGACTACAAAGCTGGGTCTA
CCCTTGAGCCATTGCCAGTTATCAGACGTATCTCCGGCAACGATGATGAT
ATCATCGATCTCGCATATGTCGGTCCCGATCGGTCGATGCTTGCGTTGGC
TACCAACACCGAAAGCATAAGGGTGGTTTCAGTTGGGCCTTCCGAGGATA
GGCCCGCTACCGGAGAGGGTGACTACTTTGGTGCCGATGTCACGCACTTA
GAAGGCCACGACGACATCATCATTTGTATCGACGTTGACTGGTCAGGCCA
CTGGCTTGTTACCGGTGCAAAGGATAATACTGCACGTCTTTGGCGGCTTG
ACCCGAAGAACTCCTCTTACACATGCTTTGCTGTCCTCACTGGACATGCC
GAGTCGCTCGGTGCCATCAGTTTCCCCCGAGCTCCTCCGCCAGCCAACAC
CCCTGCTCACAACGACCCTTTGAACCATCCTCCTGCTTTCCTGCTCACAG
GATCTCAGGATCGTACTATCAAACGATGGGACACGGGTAAATTGGCTCCC
CTCAAGTCATCCAAGCCTCACAATCCCAAGGCAGTATACACACGGAAAGC
CCATGAAAAAGATATTAATGCTTTGGATATCAATCCGACATCAACGTTGT
TCGCGTCCGCATCTCAGGATCGTACTGTGAAGATCTGGTCCATAGAGGAT
GGCTCCGTTGTGGGTGTCCTGCGTGGACATAAGAGGGGAGTCTGGTCAGC
ACGATTCGCACCTCGTGGTACTCCTATCCTCACATCCGACACCGGAACGA
GCACAAACCGAGGCATGATTGCTACAGGATCGGGAGACAAGACTATCAAG
ATCTGGAGCCTGTCGGACTACAGCTGTCTTCTCACCTTCGAAGGCCACAC
AAATAGTGTGCTCAAGGTGATCTGGCTGCCACCTTCGGACTTGTCCAACA
AGGATGAGGATGAAGACGAAGCAATGACACATAATGCAGTTGCGCAGGTG
CGACCTCTAGTTGCGTCTGCGGCCGCAGATGGCTTGGTGAAGATTTGGTC
ACCTTACAGCGGCGAGGTCGAGACGACTCTCGACAACCATGAAGACCGTG
TCTGGGCTCTAGCCAGCCCTACGCCATCTGGCTGCCGTGATGACGTTCTG
TCTTCATCTACCCTCTCACAAACTTCTCCTTACGGCCTTGCCTCTGGTTC
TGCCGACTCAACTGTTACCTTCTGGACAGACACGACTTCTGCTACATACA
CCGCTACTGTAAACGCCAACTCGGCTCGTATTGAGCAAGATCAACAGCTC
CAGAACTACATTCGTGCCGGAGCATATCGCGAAGCCATCACACTCGCGCT
TCAACTCAACCACCCAGCCCGGCTACTGTCCTTGTTTACTTCTGCCATCG
ATGCCGCAGATGACCCAACAGCGACCGACTCCGAAGCCAGCGAGCGTGCC
AACAGCCTAACTGGCAACCCCTCGATCGACGAGGTTCTTCAGACCCTTGA
CCCCGAAAATCTATGTACCCTCCTCCTTAGACTTCGTGACTGGAACACGA
ACGCCCGAACATCCAGGGTCGCACAGCGAATCTTGTTCGCTTTGTTCCGC
TCCTACCCGGCTTCAACGTTTGTCGAGCTTGCCACCTCAAGTATGGCGAA
TCGTCGCCGCGAGGGTCGCACTTCAGCAGGCATGAAGGATATCCTGCAAG
CTCTGGCCTCGTATACCGACCGGCATTATCGTCGTGTCGAAGAACTTTCC
GACGAAAGCTACCTCGTGGAATGGGTTCTGGCAGAGATGGACGGTGGTGT
GGGACTTGGAGGATTGGGCGTTTCTACCCCGTATGACCCTTACAGCAGTC
TCCCTGAAGACAGTGTCCCGGAGCATGAGAAAGATGTGGTCATGCTGGGG
GTATAGGAGAACCCAAGTGTGGATAAAACTAAGATTTTTGAATGAGACTA
TGTACAAATAGACCCGAGTTAATCTGCATGTTTGCAAATACCGTGTGTAT
GGTGGCGCTTTTAGTGGGAGTACTTGTTCTTTTCTGGTAGGAGACCAGTA
CATAAAAAGTTTCTTTTATTTTGAAATGACACTACCTGTTCTGGATTGGA
AGCTACTCAGGC
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Coding sequence (CDS) from alignment at ch6:2231038..2234549+

>KJC3_008499-T2 ID=KJC3_008499-T2|Name=KJC3_008499-T2|organism=Aspergillus niger KJC3|type=CDS|length=2688bp|location=Sequence derived from alignment at ch6:2231038..2234549+ (Aspergillus niger KJC3)
ATGTCCATGCGCATCTACTCTCTGACGCCTTTCGATGAAAACACACGAAC
CGTCGAGGCCAAACTAGCTAGAAGCTTGAAACCTCACACAGCCCCTGTTG
TCACCACTGCGATCGATCCCACGGGTACTCTCCTAGCAACTGGCGCTGCG
GATGGTTCTATTAAGGTTTGGGATATTAGGGGTGGATATATCACACATAC
TTTCCATGGTCATGGTGGTGTTATTTCGGCGCTGTGTTTCTTCCAGGTAC
CTTACCAGGACAACGACAAAGCATCATCAAAGAAGAAGAAGAAGGGACCC
AAGGGTAAAACCCATGACTCTGATGAGGATGAGGACATGGATGAAGTAGC
CGATTCGATTGGCGCTTTTCGACTCGCTTCGGGTGATGAGGAGGGTATGG
TCCGCGTCTGGGATTTGAACAAGAGAAAGCCTATCGCATCACTGGAATCG
CACGTCTCCGTTGTACGGAGTCTTTCGTACTCGCCCGCAGAGAATGCGCT
GCTCTCTGCAGGCCGCGATAAGACTGTCATTGTGTGGGATGTGCGGACTT
TCAAGACGCGCCGTGTCATCCCTGTCCTTGAGAGCGTGGAAGCAGCTTGC
TTTGTTGCTGACAGCGAATTGTGCTTGGTGGGAGGAGAGAACGGCCGTTT
GCGTGTGTGGGACTGCAACCGCGGAGGAGAGGTTACTCACGAGCAAGAAG
CTGCGGCCGAGTTCGAGGCCGTGGTGGCGATCCAGTATTCCGCAGGCATG
TCATTCGCAATGACCGTGCATGCTGACCAGACCATCCGACTGCACTCACT
TCAGCCACTCGCCGACTACAAAGCTGGGTCTACCCTTGAGCCATTGCCAG
TTATCAGACGTATCTCCGGCAACGATGATGATATCATCGATCTCGCATAT
GTCGGTCCCGATCGGTCGATGCTTGCGTTGGCTACCAACACCGAAAGCAT
AAGGGTGGTTTCAGTTGGGCCTTCCGAGGATAGGCCCGCTACCGGAGAGG
GTGACTACTTTGGTGCCGATGTCACGCACTTAGAAGGCCACGACGACATC
ATCATTTGTATCGACGTTGACTGGTCAGGCCACTGGCTTGTTACCGGTGC
AAAGGATAATACTGCACGTCTTTGGCGGCTTGACCCGAAGAACTCCTCTT
ACACATGCTTTGCTGTCCTCACTGGACATGCCGAGTCGCTCGGTGCCATC
AGTTTCCCCCGAGCTCCTCCGCCAGCCAACACCCCTGCTCACAACGACCC
TTTGAACCATCCTCCTGCTTTCCTGCTCACAGGATCTCAGGATCGTACTA
TCAAACGATGGGACACGGGTAAATTGGCTCCCCTCAAGTCATCCAAGCCT
CACAATCCCAAGGCAGTATACACACGGAAAGCCCATGAAAAAGATATTAA
TGCTTTGGATATCAATCCGACATCAACGTTGTTCGCGTCCGCATCTCAGG
ATCGTACTGTGAAGATCTGGTCCATAGAGGATGGCTCCGTTGTGGGTGTC
CTGCGTGGACATAAGAGGGGAGTCTGGTCAGCACGATTCGCACCTCGTGG
TACTCCTATCCTCACATCCGACACCGGAACGAGCACAAACCGAGGCATGA
TTGCTACAGGATCGGGAGACAAGACTATCAAGATCTGGAGCCTGTCGGAC
TACAGCTGTCTTCTCACCTTCGAAGGCCACACAAATAGTGTGCTCAAGGT
GATCTGGCTGCCACCTTCGGACTTGTCCAACAAGGATGAGGATGAAGACG
AAGCAATGACACATAATGCAGTTGCGCAGGTGCGACCTCTAGTTGCGTCT
GCGGCCGCAGATGGCTTGGTGAAGATTTGGTCACCTTACAGCGGCGAGGT
CGAGACGACTCTCGACAACCATGAAGACCGTGTCTGGGCTCTAGCCAGCC
CTACGCCATCTGGCTGCCGTGATGACGTTCTGTCTTCATCTACCCTCTCA
CAAACTTCTCCTTACGGCCTTGCCTCTGGTTCTGCCGACTCAACTGTTAC
CTTCTGGACAGACACGACTTCTGCTACATACACCGCTACTGTAAACGCCA
ACTCGGCTCGTATTGAGCAAGATCAACAGCTCCAGAACTACATTCGTGCC
GGAGCATATCGCGAAGCCATCACACTCGCGCTTCAACTCAACCACCCAGC
CCGGCTACTGTCCTTGTTTACTTCTGCCATCGATGCCGCAGATGACCCAA
CAGCGACCGACTCCGAAGCCAGCGAGCGTGCCAACAGCCTAACTGGCAAC
CCCTCGATCGACGAGGTTCTTCAGACCCTTGACCCCGAAAATCTATGTAC
CCTCCTCCTTAGACTTCGTGACTGGAACACGAACGCCCGAACATCCAGGG
TCGCACAGCGAATCTTGTTCGCTTTGTTCCGCTCCTACCCGGCTTCAACG
TTTGTCGAGCTTGCCACCTCAAGTATGGCGAATCGTCGCCGCGAGGGTCG
CACTTCAGCAGGCATGAAGGATATCCTGCAAGCTCTGGCCTCGTATACCG
ACCGGCATTATCGTCGTGTCGAAGAACTTTCCGACGAAAGCTACCTCGTG
GAATGGGTTCTGGCAGAGATGGACGGTGGTGTGGGACTTGGAGGATTGGG
CGTTTCTACCCCGTATGACCCTTACAGCAGTCTCCCTGAAGACAGTGTCC
CGGAGCATGAGAAAGATGTGGTCATGCTGGGGGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008499KJC3_008499Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008499-T2KJC3_008499-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008499-T2.utr5p1KJC3_008499-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008499-T2.utr5p2KJC3_008499-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008499-T2.exon1KJC3_008499-T2.exon1Aspergillus niger KJC3exon
KJC3_008499-T2.exon2KJC3_008499-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008499-T2.cdsKJC3_008499-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008499-T2.utr3p1KJC3_008499-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR013934
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
DBxrefPFAM:PF08625
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2231038..2234549 +
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