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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2255855..2258724+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008508-T1 ID=KJC3_008508-T1|Name=KJC3_008508-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2870bp|location=Sequence derived from alignment at ch6:2255855..2258724+ (Aspergillus niger KJC3)
CCTGGCAGATCTTCTGTAAGAGGGAGGCAGAGCCTAGTGTGGCGCTTCTG
TTTGTCTTCTTTACGTTTTTAATCCGCCGATTACCAAGAACCAAGGGCTC
TTGCTTAGAACTACTAACATAATGTCCGCTAAGGTATCGGAGCAGGACAT
AAGCCAGTCGGTGCTGAATTTCGTGACCGATGGTACTTATCCAGTATCGG
AGCAAATTGTCGCCTCTGATTTTCCTAGCTCTTTCCTGGCGAAGGAACTG
GAGCTCATATCGAAGGCTAGGGAGCAAGTTGAAGTAAGTAGTGTATCTAA
TGCGGAGCTCCGCTTAAGTAGCAGCTCAGATGGCCGTATAACTAAATGAG
AATGTCCTATAGGCCGAAATTAACTTCCTCAGTCGTGAGAACAACTTCGA
TGCCGACGGATGGATTTCACAGGCCAAGCAGCTTCATGCAGACATTGAAC
GATCTAGAGTCACTGCGAGGGAAATTGTCGAGCAACATGAGAAAACGCAG
CCTTTGCAATTGAAAGTGGAGGACGCTTCCGCGAAAGTTGGACTCATTGA
GACCGAAATTGCGTTTAATCAGGCGGTAACCAGTGCGCTGACGGAAGTAC
AAAAGCTTTGCGAACAACTAGACGACGGACGAGCAGCTCTCGGAGAGGGC
CGCACCATGGCTGCCATTGACATATTGGAATCCACTGAATACGCTGTCAA
GCAAAGCAGTCATTTCACAAACACAAATGTTCTACATATACTGCTAGAGA
ATGCTGCCGGACTGCGAAAAGATATTATGGAGGCTGTCCGTAACCGCTGG
AACGAACAGCTGCATATTGATAAGACTGAGGGAAAGCTGACCATTGCTAA
GGACAGCGGTATGTTTCTTCCGTTGGATAGCTCCAGGTAGCTCATGTTCA
CTAACAGATTTCATAGAAGATACATTGCACGAGACCATCGTGGCCTTGAC
CAGGCTTGAGATGTTCCCTTCAGCTAGGGATAGGTTTCAAAAGGAATTAA
TTTCGAAGATAGTTGACCCGATATTGCTTCCTGGAGCCACTGGACGTAGC
CACGGGTGCCATGTTTTAGGATCTACAATATACCTTGAGCCGCAGCCATC
AATGGTATCAATACCCGAGCTGCTTGAACGTCTAGTCAAGGTACTGGGCT
TCTTGAAGCAGCATATCCCCACTCCTATCGGGGAATCATTCTCAGAAATG
TTCATTCCCTCGTTGTCCTCTAAGATAATTGATCTGTGGTTAGCACCTGC
TATTCCAACCGATCTCGAAGGCTTGGGACAGTTTGAGCAAATACTCGATC
ATGTTCTCAAATTCACGAAGAACATTGAGAGTTTTGAATGGCGCGGCCAA
GAAGAACTCATCTCTTGGGTCAACCAAGCCCCGCGTCTCTGGATAGCTAG
ACGGCGCGTTGACTCATTGGATCAGGTTCGGAGAATCCTCGCTGCTTCTC
GAGGCACTACAGAACGGGTTGAGAGAATCGAAGTTGAGAAGGTTTCGGGG
AGCGATGAAGCTCTGCTGGAGAATGCTACACCTGATGATTGGGACGCTGG
TTGGGAAGAAGACAACGAAAGCGGTTCCAAGGGGAAGCAGCTCAGTACTC
TCGACGATGAAGAAGACGTGAGTGCCTGGGGGCTGGATGATGATACTGAG
GAACATGACCCCAAAACGAAACATGACACGGCCACGGCATCTGCGGACAA
TGACGATGATGCTGGAGATGCCTGGGGCTGGGGTGATGAGGATGAAGAAC
AGAACGCCGAGATCTCAGAGCCGAAGACACCAGTTGTGCCTGCAATTGTC
AATGGCAAGGGTGGGGCAAGCCATTCCACTCCCAGAGAGGTTACTTTGAG
GGAGAAGTACACCATAACGGACATCCCCAACTCAATTCTGGGAATCGTCA
AGCAACAAATTGTGGACTCCAATACCATATCCCAGCCTGCGTAAGTCTTT
CATGGCCAGAGCCTTATAGCGATGCTAATACGTTACAGACATGCCCATTC
ACGCGTGGTTTCCTCCGGAACAGGACTTCTCGCACTCCCAACTCCGATAC
TGGCCATGTTCAAAGCCACGGCCTCCACTTTCTACGGTCTCAAATTGAGT
GCAGGGCAGATGTATTTATATAACGACAGCTTGTATCTCGCTGGTCAAGT
CCGTGATCTGGCAGAGGAGTACCAAATCACTAGGCTTCATGCAGATATTG
AAGCTCTCGAAAAATATGGAAAACTGGCTTACAGCAAAGAAATGCAGACC
CAGCGCACAATTGTCACAGATCTTCTAGACGGTGCACAGGGCTTCAGCCA
ATGCTCGGAGCAACCGTTTCTGGGCGAATGCGAGAATGCAGTCAGCGCCA
CCGTGGACAGAATTCGCGACGTGTTTAAGGAATGGCAGCCTATCCTGTCG
CAGTCTGCACTTCTTCAATCGATCGGCTCATTGGTTTCAACTGTCATAAG
CAAGATAATAATTGAGATCGAGGATTTAGGTGACATTTCAGAACCTCAGT
CACAGCGGCTTGTGTCATTTTGCAACCAAGTGTCTGGGTTGGAAGATCTA
TTCATCCCGGAGGGCCCAGATAGCACCGAGCGTTCGCCTATGACGGCCGT
TTATGTACAGAATTGGTTGAAGTTCCAGTATCTTATCAATATTCTGGAAA
GCTCGCTGGCTGACATCAAGTTCCTTTGGCTCGAAGGCGAATTGCGTCTA
GAGTTCTCCCCAGACGAGGTCGTGGATCTGATTGAAGCTCTTTTTGCTGA
ATCCGACTACAGGCGAAAGGCGATCGCGGACATCAGAAGGGCGTCGCGAG
CGCAATAGTCATTAATTTCAATTGATGTATATAAATTTTGGAATCTGAAT
TATTGTTGTATTGATCGCAT back to topCoding sequence (CDS) from alignment at ch6:2255855..2258724+ >KJC3_008508-T1 ID=KJC3_008508-T1|Name=KJC3_008508-T1|organism=Aspergillus niger KJC3|type=CDS|length=6138bp|location=Sequence derived from alignment at ch6:2255855..2258724+ (Aspergillus niger KJC3)
ATGGCTGCCATTGACATATTGGAATCCACTGAATACGCTGTCAAGCAAAG
CAGTCATTTCACAAACACAAATGTTCTACATATACTGCTAGAGAATGCTG
CCGGACTGCGAAAAGATATTATGGAGGCTGTCCGTAACCGCTGGAACGAA
CAGCTGCATATTGATAAGACTGAGGGAAAGCTGACCATTGCTAAGGACAG
CGAAGATACATTGCACGAGACCATCGTGGCCTTGACCAGGCTTGAGATGT
TCCCTTCAGCTAGGGATAGGTTTCAAAAGGAATTAATTTCGAAGATAGTT
GACCCGATATTGCTTCCTGGAGCCACTGGACGTAGCCACGGGTGCCATGT
TTTAGGATCTACAATATACCTTGAGCCGCAGCCATCAATGGTATCAATAC
CCGAGCTGCTTGAACGTCTAGTCAAGGTACTGGGCTTCTTGAAGCAGCAT
ATCCCCACTCCTATCGGGGAATCATTCTCAGAAATGTTCATTCCCTCGTT
GTCCTCTAAGATAATTGATCTGTGGTTAGCACCTGCTATTCCAACCGATC
TCGAAGGCTTGGGACAGTTTGAGCAAATACTCGATCATGTTCTCAAATTC
ACGAAGAACATTGAGAGTTTTGAATGGCGCGGCCAAGAAGAACTCATCTC
TTGGGTCAACCAAGCCCCGCGTCTCTGGATAGCTAGACGGCGCGTTGACT
CATTGGATCAGGTTCGGAGAATCCTCGCTGCTTCTCGAGGCACTACAGAA
CGGGTTGAGAGAATCGAAGTTGAGAAGGTTTCGGGGAGCGATGAAGCTCT
GCTGGAGAATGCTACACCTGATGATTGGGACGCTGGTTGGGAAGAAGACA
ACGAAAGCGGTTCCAAGGGGAAGCAGCTCAGTACTCTCGACGATGAAGAA
GACGTGAGTGCCTGGGGGCTGGATGATGATACTGAGGAACATGACCCCAA
AACGAAACATGACACGGCCACGGCATCTGCGGACAATGACGATGATGCTG
GAGATGCCTGGGGCTGGGGTGATGAGGATGAAGAACAGAACGCCGAGATC
TCAGAGCCGAAGACACCAGTTGTGCCTGCAATTGTCAATGGCAAGGGTGG
GGCAAGCCATTCCACTCCCAGAGAGGTTACTTTGAGGGAGAAGTACACCA
TAACGGACATCCCCAACTCAATTCTGGGAATCGTCAAGCAACAAATTGTG
GACTCCAATACCATATCCCAGCCTGCACATGCCCATTCACGCGTGGTTTC
CTCCGGAACAGGACTTCTCGCACTCCCAACTCCGATACTGGCCATGTTCA
AAGCCACGGCCTCCACTTTCTACGGTCTCAAATTGAGTGCAGGGCAGATG
TATTTATATAACGACAGCTTGTATCTCGCTGGTCAAGTCCGTGATCTGGC
AGAGGAGTACCAAATCACTAGGCTTCATGCAGATATTGAAGCTCTCGAAA
AATATGGAAAACTGGCTTACAGCAAAGAAATGCAGACCCAGCGCACAATT
GTCACAGATCTTCTAGACGGTGCACAGGGCTTCAGCCAATGCTCGGAGCA
ACCGTTTCTGGGCGAATGCGAGAATGCAGTCAGCGCCACCGTGGACAGAA
TTCGCGACGTGTTTAAGGAATGGCAGCCTATCCTGTCGCAGTCTGCACTT
CTTCAATCGATCGGCTCATTGGTTTCAACTGTCATAAGCAAGATAATAAT
TGAGATCGAGGATTTAGGTGACATTTCAGAACCTCAGTCACAGCGGCTTG
TGTCATTTTGCAACCAAGTGTCTGGGTTGGAAGATCTATTCATCCCGGAG
GGCCCAGATAGCACCGAGCGTTCGCCTATGACGGCCGTTTATGTACAGAA
TTGGTTGAAGTTCCAGTATCTTATCAATATTCTGGAAAGCTCGCTGGCTG
ACATCAAGTTCCTTTGGCTCGAAGGCGAATTGCGTCTAGAGTTCTCCCCA
GACGAGGTCGTGGATCTGATTGAAGCTCTTTTTGCTGAATCCGACTACAG
GCGAAAGGCGATCGCGGACATCAGAAGGGCGTCGCGAGCGCAATAGATGG
CTGCCATTGACATATTGGAATCCACTGAATACGCTGTCAAGCAAAGCAGT
CATTTCACAAACACAAATGTTCTACATATACTGCTAGAGAATGCTGCCGG
ACTGCGAAAAGATATTATGGAGGCTGTCCGTAACCGCTGGAACGAACAGC
TGCATATTGATAAGACTGAGGGAAAGCTGACCATTGCTAAGGACAGCGAA
GATACATTGCACGAGACCATCGTGGCCTTGACCAGGCTTGAGATGTTCCC
TTCAGCTAGGGATAGGTTTCAAAAGGAATTAATTTCGAAGATAGTTGACC
CGATATTGCTTCCTGGAGCCACTGGACGTAGCCACGGGTGCCATGTTTTA
GGATCTACAATATACCTTGAGCCGCAGCCATCAATGGTATCAATACCCGA
GCTGCTTGAACGTCTAGTCAAGGTACTGGGCTTCTTGAAGCAGCATATCC
CCACTCCTATCGGGGAATCATTCTCAGAAATGTTCATTCCCTCGTTGTCC
TCTAAGATAATTGATCTGTGGTTAGCACCTGCTATTCCAACCGATCTCGA
AGGCTTGGGACAGTTTGAGCAAATACTCGATCATGTTCTCAAATTCACGA
AGAACATTGAGAGTTTTGAATGGCGCGGCCAAGAAGAACTCATCTCTTGG
GTCAACCAAGCCCCGCGTCTCTGGATAGCTAGACGGCGCGTTGACTCATT
GGATCAGGTTCGGAGAATCCTCGCTGCTTCTCGAGGCACTACAGAACGGG
TTGAGAGAATCGAAGTTGAGAAGGTTTCGGGGAGCGATGAAGCTCTGCTG
GAGAATGCTACACCTGATGATTGGGACGCTGGTTGGGAAGAAGACAACGA
AAGCGGTTCCAAGGGGAAGCAGCTCAGTACTCTCGACGATGAAGAAGACG
TGAGTGCCTGGGGGCTGGATGATGATACTGAGGAACATGACCCCAAAACG
AAACATGACACGGCCACGGCATCTGCGGACAATGACGATGATGCTGGAGA
TGCCTGGGGCTGGGGTGATGAGGATGAAGAACAGAACGCCGAGATCTCAG
AGCCGAAGACACCAGTTGTGCCTGCAATTGTCAATGGCAAGGGTGGGGCA
AGCCATTCCACTCCCAGAGAGGTTACTTTGAGGGAGAAGTACACCATAAC
GGACATCCCCAACTCAATTCTGGGAATCGTCAAGCAACAAATTGTGGACT
CCAATACCATATCCCAGCCTGCACATGCCCATTCACGCGTGGTTTCCTCC
GGAACAGGACTTCTCGCACTCCCAACTCCGATACTGGCCATGTTCAAAGC
CACGGCCTCCACTTTCTACGGTCTCAAATTGAGTGCAGGGCAGATGTATT
TATATAACGACAGCTTGTATCTCGCTGGTCAAGTCCGTGATCTGGCAGAG
GAGTACCAAATCACTAGGCTTCATGCAGATATTGAAGCTCTCGAAAAATA
TGGAAAACTGGCTTACAGCAAAGAAATGCAGACCCAGCGCACAATTGTCA
CAGATCTTCTAGACGGTGCACAGGGCTTCAGCCAATGCTCGGAGCAACCG
TTTCTGGGCGAATGCGAGAATGCAGTCAGCGCCACCGTGGACAGAATTCG
CGACGTGTTTAAGGAATGGCAGCCTATCCTGTCGCAGTCTGCACTTCTTC
AATCGATCGGCTCATTGGTTTCAACTGTCATAAGCAAGATAATAATTGAG
ATCGAGGATTTAGGTGACATTTCAGAACCTCAGTCACAGCGGCTTGTGTC
ATTTTGCAACCAAGTGTCTGGGTTGGAAGATCTATTCATCCCGGAGGGCC
CAGATAGCACCGAGCGTTCGCCTATGACGGCCGTTTATGTACAGAATTGG
TTGAAGTTCCAGTATCTTATCAATATTCTGGAAAGCTCGCTGGCTGACAT
CAAGTTCCTTTGGCTCGAAGGCGAATTGCGTCTAGAGTTCTCCCCAGACG
AGGTCGTGGATCTGATTGAAGCTCTTTTTGCTGAATCCGACTACAGGCGA
AAGGCGATCGCGGACATCAGAAGGGCGTCGCGAGCGCAATAGATGGCTGC
CATTGACATATTGGAATCCACTGAATACGCTGTCAAGCAAAGCAGTCATT
TCACAAACACAAATGTTCTACATATACTGCTAGAGAATGCTGCCGGACTG
CGAAAAGATATTATGGAGGCTGTCCGTAACCGCTGGAACGAACAGCTGCA
TATTGATAAGACTGAGGGAAAGCTGACCATTGCTAAGGACAGCGAAGATA
CATTGCACGAGACCATCGTGGCCTTGACCAGGCTTGAGATGTTCCCTTCA
GCTAGGGATAGGTTTCAAAAGGAATTAATTTCGAAGATAGTTGACCCGAT
ATTGCTTCCTGGAGCCACTGGACGTAGCCACGGGTGCCATGTTTTAGGAT
CTACAATATACCTTGAGCCGCAGCCATCAATGGTATCAATACCCGAGCTG
CTTGAACGTCTAGTCAAGGTACTGGGCTTCTTGAAGCAGCATATCCCCAC
TCCTATCGGGGAATCATTCTCAGAAATGTTCATTCCCTCGTTGTCCTCTA
AGATAATTGATCTGTGGTTAGCACCTGCTATTCCAACCGATCTCGAAGGC
TTGGGACAGTTTGAGCAAATACTCGATCATGTTCTCAAATTCACGAAGAA
CATTGAGAGTTTTGAATGGCGCGGCCAAGAAGAACTCATCTCTTGGGTCA
ACCAAGCCCCGCGTCTCTGGATAGCTAGACGGCGCGTTGACTCATTGGAT
CAGGTTCGGAGAATCCTCGCTGCTTCTCGAGGCACTACAGAACGGGTTGA
GAGAATCGAAGTTGAGAAGGTTTCGGGGAGCGATGAAGCTCTGCTGGAGA
ATGCTACACCTGATGATTGGGACGCTGGTTGGGAAGAAGACAACGAAAGC
GGTTCCAAGGGGAAGCAGCTCAGTACTCTCGACGATGAAGAAGACGTGAG
TGCCTGGGGGCTGGATGATGATACTGAGGAACATGACCCCAAAACGAAAC
ATGACACGGCCACGGCATCTGCGGACAATGACGATGATGCTGGAGATGCC
TGGGGCTGGGGTGATGAGGATGAAGAACAGAACGCCGAGATCTCAGAGCC
GAAGACACCAGTTGTGCCTGCAATTGTCAATGGCAAGGGTGGGGCAAGCC
ATTCCACTCCCAGAGAGGTTACTTTGAGGGAGAAGTACACCATAACGGAC
ATCCCCAACTCAATTCTGGGAATCGTCAAGCAACAAATTGTGGACTCCAA
TACCATATCCCAGCCTGCACATGCCCATTCACGCGTGGTTTCCTCCGGAA
CAGGACTTCTCGCACTCCCAACTCCGATACTGGCCATGTTCAAAGCCACG
GCCTCCACTTTCTACGGTCTCAAATTGAGTGCAGGGCAGATGTATTTATA
TAACGACAGCTTGTATCTCGCTGGTCAAGTCCGTGATCTGGCAGAGGAGT
ACCAAATCACTAGGCTTCATGCAGATATTGAAGCTCTCGAAAAATATGGA
AAACTGGCTTACAGCAAAGAAATGCAGACCCAGCGCACAATTGTCACAGA
TCTTCTAGACGGTGCACAGGGCTTCAGCCAATGCTCGGAGCAACCGTTTC
TGGGCGAATGCGAGAATGCAGTCAGCGCCACCGTGGACAGAATTCGCGAC
GTGTTTAAGGAATGGCAGCCTATCCTGTCGCAGTCTGCACTTCTTCAATC
GATCGGCTCATTGGTTTCAACTGTCATAAGCAAGATAATAATTGAGATCG
AGGATTTAGGTGACATTTCAGAACCTCAGTCACAGCGGCTTGTGTCATTT
TGCAACCAAGTGTCTGGGTTGGAAGATCTATTCATCCCGGAGGGCCCAGA
TAGCACCGAGCGTTCGCCTATGACGGCCGTTTATGTACAGAATTGGTTGA
AGTTCCAGTATCTTATCAATATTCTGGAAAGCTCGCTGGCTGACATCAAG
TTCCTTTGGCTCGAAGGCGAATTGCGTCTAGAGTTCTCCCCAGACGAGGT
CGTGGATCTGATTGAAGCTCTTTTTGCTGAATCCGACTACAGGCGAAAGG
CGATCGCGGACATCAGAAGGGCGTCGCGAGCGCAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008508-T1.utr3p1 | KJC3_008508-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2255855..2258724 + |
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