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KJC3_008521-T1, KJC3_008521-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008521-T1
Unique NameKJC3_008521-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2298388..2299251-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008521-T1 ID=KJC3_008521-T1|Name=KJC3_008521-T1|organism=Aspergillus niger KJC3|type=mRNA|length=864bp|location=Sequence derived from alignment at ch6:2298388..2299251- (Aspergillus niger KJC3)
ATGGTATGTTGCCCATCGCCAATACACTTTTCAGCATTGATATAAACCCG
ATTCTCGAGAATCCGAAAATTTTATAAACGAAATTTTTTTCTAACATTTT
TGTCGCCATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCG
AGCTGCGCATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGT
GACAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGAC
TCCGGTCTACAGTAAGAACGCCCGATCCCGACGAATCCGAGAAATTCGAA
CACAAAGCCGCCGAGGAAGGAGGATATGACAACTGTGTTATGGAATGGAT
GGCTGATGGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTACACCGTC
CGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGT
CCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGG
AGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTC
GGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGG
TATCTACGGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCT
ACGCAGTCCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGG
ACAAGTCGAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGT
GAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCA
CCGTATCACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACG
GTATCGTCCGGTAA
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Coding sequence (CDS) from alignment at ch6:2298388..2299251-

>KJC3_008521-T1 ID=KJC3_008521-T1|Name=KJC3_008521-T1|organism=Aspergillus niger KJC3|type=CDS|length=2112bp|location=Sequence derived from alignment at ch6:2298388..2299251- (Aspergillus niger KJC3)
GACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTA
TCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTTCAAG
AACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGTTACACCGTCCGT
ACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCG
TGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGT
ACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGT
ATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTAT
CTACGGCATGGACTTCTACTGCTGCATTCGGAATCCAAGGACAAGTCCGC
CAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTTAACATCTCCG
TCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAG
CTGAGCGGTCAGACTCCGGTCTACAATGGACCCGCCCTGGTGAGCGTGTC
GCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATCAC
CCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGTCC
GGTAAGCAAGGCCCGTTACACCGTCCGTACCTTCGGTATCCGTCGTAACG
AGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATC
CTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTT
CTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATCTGG
GTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTACTGC
TGCATTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCGC
ATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGACAGACT
TACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTCCGGTCT
ACAATGGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGG
CCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGG
TTCAAGAACCGCTTCGACGGTATCGTCCGGTAAGCAAGGCCCGTTACACC
GTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTAC
CGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCA
AGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGT
TTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTAT
CGGTATCTACGGCATGGACTTCTACTGCTGCATTCGGAATCCAAGGACAA
GTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTTAACA
TCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTC
GAGCAGCTGAGCGGTCAGACTCCGGTCTACAATGGACCCGCCCTGGTGAG
CGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCG
TATCACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTA
TCGTCCGGTAAGCAAGGCCCGTTACACCGTCCGTACCTTCGGTATCCGTC
GTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAG
GAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCG
CAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCG
ATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTC
TACTGCTGCATTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAG
CTGCGCATCCAGAAGCTCGTGCTTAACATCTCCGTCGGCGAGTCTGGTGA
CAGACTTACTCGCGCTGCTAAGGTGCTCGAGCAGCTGAGCGGTCAGACTC
CGGTCTACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL11KJC3_008521Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008521-T1KJC3_008521-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008521-T1.cdsKJC3_008521-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008521-T1.exon4KJC3_008521-T1.exon4Aspergillus niger KJC3exon
KJC3_008521-T1.exon3KJC3_008521-T1.exon3Aspergillus niger KJC3exon
KJC3_008521-T1.exon2KJC3_008521-T1.exon2Aspergillus niger KJC3exon
KJC3_008521-T1.exon1KJC3_008521-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264X8J
DBxrefInterPro:IPR020929
DBxrefInterPro:IPR031309
DBxrefInterPro:IPR022803
DBxrefInterPro:IPR031310
DBxrefInterPro:IPR002132
DBxrefPFAM:PF00673
DBxrefPFAM:PF00281
Product60S ribosomal protein L11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2298388..2299251 -
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