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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2329542..2331662- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008535-T1 ID=KJC3_008535-T1|Name=KJC3_008535-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2121bp|location=Sequence derived from alignment at ch6:2329542..2331662- (Aspergillus niger KJC3)
TCCAACAACATCACTCAAGTACATAGTCGCCGTCGCCCATATGAGTCAAC
AATTAAAATAATTATTCAAGTGTATTCGGATAAATTGACGCCAAAATGGC
AAGCAGCGACGAGTTCCTGCGCCCTCCCACGTTCGTTCTCCCGCATGTCA
ATCTCCCCGATTGTTAAATTTGCTAAAGATGAAGTCTAACTGTCGATGCG
GCTCATATAGCAATGAAGAATTTGACGCAACCACCCGTGTACCCTCACAT
TATAAACCTTTGGACACATTTCGACTGGGAAGCGGCCAGGATAGGCATTA
CCAGCAGCAATATGGCGACATGTACTTCTTGCGGTTGGCAAAACTCAAGC
CCGCAGTTGAGGAGATTGCAGTCGAAGCATGGGAAGGTTTTAGTGTAAGA
CCGGTCACATTCATCGCATTTCAAGACCTCGATTGAGGATTACAATAGCA
TACAAATGGGAAACTGGTTTGCTGACATGTCTTGGTTTGGTGGCCAGATC
GCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGACGTGAGGCAGGG
AGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACATGCCATTGAAGC
CGAATATTTTGGACGATCTTACAAAAGAGGTGAAATACTACAATGCTCTG
TTGCGTATGGCTCTCATTCTAATTCTGGCAACAGAACTATACGTTAGCAC
CACCTCCGCGGCCGACTTACCAAGATCCTGCTCATCCGGAGTTGACTCAA
ATTATGTTGGAAGACGAGTCCGGCCGACTGCGCCTAACTGGGAGCATGCT
CCGGAACACGCAGTTATGCACAGGAGCCATCATTGCAGTCCTGGGAACCG
AGAACGCAAATGGAGATTTCGAGGTTATAGATACCAAAGTGCCTGATCTA
CCACAACAACCCCGCCGATGGGGGAGCGATACACTGGACGCACCAACGGG
AGCCATGAAGGGTAAGATCGCATTTGTGAGCGGCTTAGGGATCACCGGAA
CTTCGAGCGATACTCTTGCTTTGGAACTTTTGGCAGACTATTTGCTTGGT
TATACCGGTGGTGCTTCTGAAGGTGCACTGCCCGATGCTTCTGCAATCAC
TAGGTTGATTATTGCGGGAAATTCAGTTGGAGCGAGCATGACTACGGATG
TCAACGCCGATAGCGCTACAAAGAAAAGGACCGGTCCGAAGAAGTACGGA
TATGATGCTTCTGCTTATAATGCATCGCCTATTACGCGACTTGATTCTTT
CCTAGCAGAGATCCTGCCTAGTATGCCCGTCACACTTATGCCAGGCGAAT
CTGACCCGGCAAACTTTTCTCTCCCTCAACAGGGAATCCACCGTGCTATG
TTCCCACAGGCTAGGGCATACTGTGCTCCGCCTCCTGCTGGTGAGGACAA
GAAAGAGCCAGGTTGGTTCGACAGTGTAACGAACCCGTGGGAAGGGGACG
TGGAAGGATGGCGACTATGGGGCAGCAGTGGTCAGAATGTGGATGACATC
CTCCGGTATTTGAATTTCGCAGATGAGGAAGGGAATGTGGCCGATGGTGC
TGGAGATTCAGAGGCGAGGATGAGGGTCATGGAGGCTATGCTGCGCTGGA
GATGTGGAGTTCCCACCGCGCCCGATACACTATGTAAGCTCCTGGTTGAC
CTCTTGATCCCACTGGTACAAATGCTGATATCTCGGAAACAGGGTCCTAT
CCATTCCAAACACATGATCCATTCGTTATACAAACCTGCCCGCATATTTT
CTTTGCTGGCAACCAGCCACAGTTCAAGACAGCTGTAATTGAGGGTGATG
CCCCACTGAAGCTGAACGGAGCCGACACGGAGATGACAGGAACAGATGAC
GATAACACATCTGGGCCTCGTGTGCGCCTTCTATCTATACCCAAGTTCAA
GGAAACCGGAGAACTAGTTTTGGTCGACACCGAGACCCTCGAGGTGGAAG
TGGTGAAGTTTAGCACATTTGCCGGACAACAAGAGCAACAATAAGCAGCT
GATACCAATAGCATATATTAATGAGATATAAGTCTTATGAGCTACTGCTT
TGTTGTTTTGTTTTGTTCTTTTCTTATCATATCATTGACACCGATATGCT
GGCTAAATCGGAAACAAGGGC back to topCoding sequence (CDS) from alignment at ch6:2329542..2331662- >KJC3_008535-T1 ID=KJC3_008535-T1|Name=KJC3_008535-T1|organism=Aspergillus niger KJC3|type=CDS|length=8010bp|location=Sequence derived from alignment at ch6:2329542..2331662- (Aspergillus niger KJC3)
GGTCCTATCCATTCCAAACACATGATCCATTCGTTATACAAACCTGCCCG
CATATTTTCTTTGCTGGCAACCAGCCACAGTTCAAGACAGCTGTAATTGA
GGGTGATGCCCCACTGAAGCTGAACGGAGCCGACACGGAGATGACAGGAA
CAGATGACGATAACACATCTGGGCCTCGTGTGCGCCTTCTATCTATACCC
AAGTTCAAGGAAACCGGAGAACTAGTTTTGGTCGACACCGAGACCCTCGA
GGTGGAAGTGGTGAAGTTTAGCACATTTGCCGGACAACAAGAGCAACAAT
AAAACTATACGTTAGCACCACCTCCGCGGCCGACTTACCAAGATCCTGCT
CATCCGGAGTTGACTCAAATTATGTTGGAAGACGAGTCCGGCCGACTGCG
CCTAACTGGGAGCATGCTCCGGAACACGCAGTTATGCACAGGAGCCATCA
TTGCAGTCCTGGGAACCGAGAACGCAAATGGAGATTTCGAGGTTATAGAT
ACCAAAGTGCCTGATCTACCACAACAACCCCGCCGATGGGGGAGCGATAC
ACTGGACGCACCAACGGGAGCCATGAAGGGTAAGATCGCATTTGTGAGCG
GCTTAGGGATCACCGGAACTTCGAGCGATACTCTTGCTTTGGAACTTTTG
GCAGACTATTTGCTTGGTTATACCGGTGGTGCTTCTGAAGGTGCACTGCC
CGATGCTTCTGCAATCACTAGGTTGATTATTGCGGGAAATTCAGTTGGAG
CGAGCATGACTACGGATGTCAACGCCGATAGCGCTACAAAGAAAAGGACC
GGTCCGAAGAAGTACGGATATGATGCTTCTGCTTATAATGCATCGCCTAT
TACGCGACTTGATTCTTTCCTAGCAGAGATCCTGCCTAGTATGCCCGTCA
CACTTATGCCAGGCGAATCTGACCCGGCAAACTTTTCTCTCCCTCAACAG
GGAATCCACCGTGCTATGTTCCCACAGGCTAGGGCATACTGTGCTCCGCC
TCCTGCTGGTGAGGACAAGAAAGAGCCAGGTTGGTTCGACAGTGTAACGA
ACCCGTGGGAAGGGGACGTGGAAGGATGGCGACTATGGGGCAGCAGTGGT
CAGAATGTGGATGACATCCTCCGGTATTTGAATTTCGCAGATGAGGAAGG
GAATGTGGCCGATGGTGCTGGAGATTCAGAGGCGAGGATGAGGGTCATGG
AGGCTATGCTGCGCTGGAGATGTGGAGTTCCCACCGCGCCCGATACACTA
TATCGCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGACGTGAGGC
AGGGAGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACATGCCATTG
AAGCCGAATATTTTGGACGATCTTACAAAAGAGCAATGAAGAATTTGACG
CAACCACCCGTGTACCCTCACATTATAAACCTTTGGACACATTTCGACTG
GGAAGCGGCCAGGATAGGCATTACCAGCAGCAATATGGCGACATGTACTT
CTTGCGGTTGGCAAAACTCAAGCCCGCAGTTGAGGAGATTGCAGTCGAAG
CATGGGAAGGTTTTAGTATGGCAAGCAGCGACGAGTTCCTGCGCCCTCCC
ACGGTCCTATCCATTCCAAACACATGATCCATTCGTTATACAAACCTGCC
CGCATATTTTCTTTGCTGGCAACCAGCCACAGTTCAAGACAGCTGTAATT
GAGGGTGATGCCCCACTGAAGCTGAACGGAGCCGACACGGAGATGACAGG
AACAGATGACGATAACACATCTGGGCCTCGTGTGCGCCTTCTATCTATAC
CCAAGTTCAAGGAAACCGGAGAACTAGTTTTGGTCGACACCGAGACCCTC
GAGGTGGAAGTGGTGAAGTTTAGCACATTTGCCGGACAACAAGAGCAACA
ATAAAACTATACGTTAGCACCACCTCCGCGGCCGACTTACCAAGATCCTG
CTCATCCGGAGTTGACTCAAATTATGTTGGAAGACGAGTCCGGCCGACTG
CGCCTAACTGGGAGCATGCTCCGGAACACGCAGTTATGCACAGGAGCCAT
CATTGCAGTCCTGGGAACCGAGAACGCAAATGGAGATTTCGAGGTTATAG
ATACCAAAGTGCCTGATCTACCACAACAACCCCGCCGATGGGGGAGCGAT
ACACTGGACGCACCAACGGGAGCCATGAAGGGTAAGATCGCATTTGTGAG
CGGCTTAGGGATCACCGGAACTTCGAGCGATACTCTTGCTTTGGAACTTT
TGGCAGACTATTTGCTTGGTTATACCGGTGGTGCTTCTGAAGGTGCACTG
CCCGATGCTTCTGCAATCACTAGGTTGATTATTGCGGGAAATTCAGTTGG
AGCGAGCATGACTACGGATGTCAACGCCGATAGCGCTACAAAGAAAAGGA
CCGGTCCGAAGAAGTACGGATATGATGCTTCTGCTTATAATGCATCGCCT
ATTACGCGACTTGATTCTTTCCTAGCAGAGATCCTGCCTAGTATGCCCGT
CACACTTATGCCAGGCGAATCTGACCCGGCAAACTTTTCTCTCCCTCAAC
AGGGAATCCACCGTGCTATGTTCCCACAGGCTAGGGCATACTGTGCTCCG
CCTCCTGCTGGTGAGGACAAGAAAGAGCCAGGTTGGTTCGACAGTGTAAC
GAACCCGTGGGAAGGGGACGTGGAAGGATGGCGACTATGGGGCAGCAGTG
GTCAGAATGTGGATGACATCCTCCGGTATTTGAATTTCGCAGATGAGGAA
GGGAATGTGGCCGATGGTGCTGGAGATTCAGAGGCGAGGATGAGGGTCAT
GGAGGCTATGCTGCGCTGGAGATGTGGAGTTCCCACCGCGCCCGATACAC
TATATCGCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGACGTGAG
GCAGGGAGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACATGCCAT
TGAAGCCGAATATTTTGGACGATCTTACAAAAGAGCAATGAAGAATTTGA
CGCAACCACCCGTGTACCCTCACATTATAAACCTTTGGACACATTTCGAC
TGGGAAGCGGCCAGGATAGGCATTACCAGCAGCAATATGGCGACATGTAC
TTCTTGCGGTTGGCAAAACTCAAGCCCGCAGTTGAGGAGATTGCAGTCGA
AGCATGGGAAGGTTTTAGTATGGCAAGCAGCGACGAGTTCCTGCGCCCTC
CCACGGTCCTATCCATTCCAAACACATGATCCATTCGTTATACAAACCTG
CCCGCATATTTTCTTTGCTGGCAACCAGCCACAGTTCAAGACAGCTGTAA
TTGAGGGTGATGCCCCACTGAAGCTGAACGGAGCCGACACGGAGATGACA
GGAACAGATGACGATAACACATCTGGGCCTCGTGTGCGCCTTCTATCTAT
ACCCAAGTTCAAGGAAACCGGAGAACTAGTTTTGGTCGACACCGAGACCC
TCGAGGTGGAAGTGGTGAAGTTTAGCACATTTGCCGGACAACAAGAGCAA
CAATAAAACTATACGTTAGCACCACCTCCGCGGCCGACTTACCAAGATCC
TGCTCATCCGGAGTTGACTCAAATTATGTTGGAAGACGAGTCCGGCCGAC
TGCGCCTAACTGGGAGCATGCTCCGGAACACGCAGTTATGCACAGGAGCC
ATCATTGCAGTCCTGGGAACCGAGAACGCAAATGGAGATTTCGAGGTTAT
AGATACCAAAGTGCCTGATCTACCACAACAACCCCGCCGATGGGGGAGCG
ATACACTGGACGCACCAACGGGAGCCATGAAGGGTAAGATCGCATTTGTG
AGCGGCTTAGGGATCACCGGAACTTCGAGCGATACTCTTGCTTTGGAACT
TTTGGCAGACTATTTGCTTGGTTATACCGGTGGTGCTTCTGAAGGTGCAC
TGCCCGATGCTTCTGCAATCACTAGGTTGATTATTGCGGGAAATTCAGTT
GGAGCGAGCATGACTACGGATGTCAACGCCGATAGCGCTACAAAGAAAAG
GACCGGTCCGAAGAAGTACGGATATGATGCTTCTGCTTATAATGCATCGC
CTATTACGCGACTTGATTCTTTCCTAGCAGAGATCCTGCCTAGTATGCCC
GTCACACTTATGCCAGGCGAATCTGACCCGGCAAACTTTTCTCTCCCTCA
ACAGGGAATCCACCGTGCTATGTTCCCACAGGCTAGGGCATACTGTGCTC
CGCCTCCTGCTGGTGAGGACAAGAAAGAGCCAGGTTGGTTCGACAGTGTA
ACGAACCCGTGGGAAGGGGACGTGGAAGGATGGCGACTATGGGGCAGCAG
TGGTCAGAATGTGGATGACATCCTCCGGTATTTGAATTTCGCAGATGAGG
AAGGGAATGTGGCCGATGGTGCTGGAGATTCAGAGGCGAGGATGAGGGTC
ATGGAGGCTATGCTGCGCTGGAGATGTGGAGTTCCCACCGCGCCCGATAC
ACTATATCGCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGACGTG
AGGCAGGGAGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACATGCC
ATTGAAGCCGAATATTTTGGACGATCTTACAAAAGAGCAATGAAGAATTT
GACGCAACCACCCGTGTACCCTCACATTATAAACCTTTGGACACATTTCG
ACTGGGAAGCGGCCAGGATAGGCATTACCAGCAGCAATATGGCGACATGT
ACTTCTTGCGGTTGGCAAAACTCAAGCCCGCAGTTGAGGAGATTGCAGTC
GAAGCATGGGAAGGTTTTAGTATGGCAAGCAGCGACGAGTTCCTGCGCCC
TCCCACGGTCCTATCCATTCCAAACACATGATCCATTCGTTATACAAACC
TGCCCGCATATTTTCTTTGCTGGCAACCAGCCACAGTTCAAGACAGCTGT
AATTGAGGGTGATGCCCCACTGAAGCTGAACGGAGCCGACACGGAGATGA
CAGGAACAGATGACGATAACACATCTGGGCCTCGTGTGCGCCTTCTATCT
ATACCCAAGTTCAAGGAAACCGGAGAACTAGTTTTGGTCGACACCGAGAC
CCTCGAGGTGGAAGTGGTGAAGTTTAGCACATTTGCCGGACAACAAGAGC
AACAATAAAACTATACGTTAGCACCACCTCCGCGGCCGACTTACCAAGAT
CCTGCTCATCCGGAGTTGACTCAAATTATGTTGGAAGACGAGTCCGGCCG
ACTGCGCCTAACTGGGAGCATGCTCCGGAACACGCAGTTATGCACAGGAG
CCATCATTGCAGTCCTGGGAACCGAGAACGCAAATGGAGATTTCGAGGTT
ATAGATACCAAAGTGCCTGATCTACCACAACAACCCCGCCGATGGGGGAG
CGATACACTGGACGCACCAACGGGAGCCATGAAGGGTAAGATCGCATTTG
TGAGCGGCTTAGGGATCACCGGAACTTCGAGCGATACTCTTGCTTTGGAA
CTTTTGGCAGACTATTTGCTTGGTTATACCGGTGGTGCTTCTGAAGGTGC
ACTGCCCGATGCTTCTGCAATCACTAGGTTGATTATTGCGGGAAATTCAG
TTGGAGCGAGCATGACTACGGATGTCAACGCCGATAGCGCTACAAAGAAA
AGGACCGGTCCGAAGAAGTACGGATATGATGCTTCTGCTTATAATGCATC
GCCTATTACGCGACTTGATTCTTTCCTAGCAGAGATCCTGCCTAGTATGC
CCGTCACACTTATGCCAGGCGAATCTGACCCGGCAAACTTTTCTCTCCCT
CAACAGGGAATCCACCGTGCTATGTTCCCACAGGCTAGGGCATACTGTGC
TCCGCCTCCTGCTGGTGAGGACAAGAAAGAGCCAGGTTGGTTCGACAGTG
TAACGAACCCGTGGGAAGGGGACGTGGAAGGATGGCGACTATGGGGCAGC
AGTGGTCAGAATGTGGATGACATCCTCCGGTATTTGAATTTCGCAGATGA
GGAAGGGAATGTGGCCGATGGTGCTGGAGATTCAGAGGCGAGGATGAGGG
TCATGGAGGCTATGCTGCGCTGGAGATGTGGAGTTCCCACCGCGCCCGAT
ACACTATATCGCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGACG
TGAGGCAGGGAGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACATG
CCATTGAAGCCGAATATTTTGGACGATCTTACAAAAGAGCAATGAAGAAT
TTGACGCAACCACCCGTGTACCCTCACATTATAAACCTTTGGACACATTT
CGACTGGGAAGCGGCCAGGATAGGCATTACCAGCAGCAATATGGCGACAT
GTACTTCTTGCGGTTGGCAAAACTCAAGCCCGCAGTTGAGGAGATTGCAG
TCGAAGCATGGGAAGGTTTTAGTATGGCAAGCAGCGACGAGTTCCTGCGC
CCTCCCACGGTCCTATCCATTCCAAACACATGATCCATTCGTTATACAAA
CCTGCCCGCATATTTTCTTTGCTGGCAACCAGCCACAGTTCAAGACAGCT
GTAATTGAGGGTGATGCCCCACTGAAGCTGAACGGAGCCGACACGGAGAT
GACAGGAACAGATGACGATAACACATCTGGGCCTCGTGTGCGCCTTCTAT
CTATACCCAAGTTCAAGGAAACCGGAGAACTAGTTTTGGTCGACACCGAG
ACCCTCGAGGTGGAAGTGGTGAAGTTTAGCACATTTGCCGGACAACAAGA
GCAACAATAAAACTATACGTTAGCACCACCTCCGCGGCCGACTTACCAAG
ATCCTGCTCATCCGGAGTTGACTCAAATTATGTTGGAAGACGAGTCCGGC
CGACTGCGCCTAACTGGGAGCATGCTCCGGAACACGCAGTTATGCACAGG
AGCCATCATTGCAGTCCTGGGAACCGAGAACGCAAATGGAGATTTCGAGG
TTATAGATACCAAAGTGCCTGATCTACCACAACAACCCCGCCGATGGGGG
AGCGATACACTGGACGCACCAACGGGAGCCATGAAGGGTAAGATCGCATT
TGTGAGCGGCTTAGGGATCACCGGAACTTCGAGCGATACTCTTGCTTTGG
AACTTTTGGCAGACTATTTGCTTGGTTATACCGGTGGTGCTTCTGAAGGT
GCACTGCCCGATGCTTCTGCAATCACTAGGTTGATTATTGCGGGAAATTC
AGTTGGAGCGAGCATGACTACGGATGTCAACGCCGATAGCGCTACAAAGA
AAAGGACCGGTCCGAAGAAGTACGGATATGATGCTTCTGCTTATAATGCA
TCGCCTATTACGCGACTTGATTCTTTCCTAGCAGAGATCCTGCCTAGTAT
GCCCGTCACACTTATGCCAGGCGAATCTGACCCGGCAAACTTTTCTCTCC
CTCAACAGGGAATCCACCGTGCTATGTTCCCACAGGCTAGGGCATACTGT
GCTCCGCCTCCTGCTGGTGAGGACAAGAAAGAGCCAGGTTGGTTCGACAG
TGTAACGAACCCGTGGGAAGGGGACGTGGAAGGATGGCGACTATGGGGCA
GCAGTGGTCAGAATGTGGATGACATCCTCCGGTATTTGAATTTCGCAGAT
GAGGAAGGGAATGTGGCCGATGGTGCTGGAGATTCAGAGGCGAGGATGAG
GGTCATGGAGGCTATGCTGCGCTGGAGATGTGGAGTTCCCACCGCGCCCG
ATACACTATATCGCTGGAGAAAATGCGCGCCGCGTGGAGAGAGTCCTCGA
CGTGAGGCAGGGAGAGCTTTGTTGGGTCGCAGGAACGATATACATGGACA
TGCCATTGAAGCCGAATATTTTGGACGATCTTACAAAAGAGCAATGAAGA
ATTTGACGCAACCACCCGTGTACCCTCACATTATAAACCTTTGGACACAT
TTCGACTGGGAAGCGGCCAGGATAGGCATTACCAGCAGCAATATGGCGAC
ATGTACTTCTTGCGGTTGGCAAAACTCAAGCCCGCAGTTGAGGAGATTGC
AGTCGAAGCATGGGAAGGTTTTAGTATGGCAAGCAGCGACGAGTTCCTGC
GCCCTCCCAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008535-T1.utr3p1 | KJC3_008535-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008535-T1.utr5p1 | KJC3_008535-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263CUU |
| DBxref | InterPro:IPR041863 |
| DBxref | InterPro:IPR040663 |
| DBxref | InterPro:IPR007185 |
| DBxref | PFAM:PF04042 |
| DBxref | PFAM:PF18018 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2329542..2331662 - |
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