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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2335273..2337657- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008538-T1 ID=KJC3_008538-T1|Name=KJC3_008538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2385bp|location=Sequence derived from alignment at ch6:2335273..2337657- (Aspergillus niger KJC3) GGCGTTCATTAGTCGACTCCGTCGCCAAACTGCCTTTTGACTCTCAAGAC
ACTTTGCAGGCTGCTTACGCCGTGTGATTTCGGTCAGCTTGGCAGAACCG
GGCTAGTAGAGGGCCTTAGGGATCCATTACCCACCGAGTTCTCCAAGTCT
GGGAAAAGGCCACCCAGGTTCTCCGCTACACTGGACATTCGAATCACTGA
GTCACTGTCGATCACGACACTCCCCTGCCTATCCGCAGCTCCGTCTTCGA
ATCGGGCTCACTCCTTGTCGACTCGTTGCCACCGCTCCGTGGCGTGAATA
GCGAATCCATTTCCCGCCAGTCCTAGCCAACCGTTCCGGCTTCGCAATTT
TCGTTTTCGTGGATTGGCCACGCGACCACCGCCAACGCAATCGCTCTACG
ATAGTTCGACTCGATCTTTATCCTCTAAAACTCGGAGCAATGTCTGCTGC
AGCAATGTCGAAAAAGAACAAGGGGAAGAAGGTCGCAGACCCCAATGAGA
CATCCAAGCTCTTGGCTGCCAAAATATCGCAGTTGGAGCAAGATGCTGCC
GGAGAAAAGGATCAGGAGGCAGAAATCGGTGCGTCATAATCATGAGTGGT
GGAATAAGTGGAATAGTAGTTGTTTCATGGGCTGACTGTTTGCCTATAGA
GCGCGAAGTTAAGAAGGCTACGAGGGACCTGAACCAACTCCTTAGCAATA
TCGAATCTCCGATGACACGGCTCGAGACGGTTCACAAAAAGTACACCGAA
CTACTGGCCGATATGAAGAAGCTAGATCGCGACTATTCTAAGAGCAAGAA
GCGGGCCGATCAACTGCAGAAGGATCAGGACAAGGGCAAATCCGAGTTGA
ACAAAACCGTTACTATGAAGGATAAATTAGAAAAGCTGTGTAGGGAGCTA
ACCAAGGAAAATAAGAAGGTCAAGGTAGGTTGGTCCAAGCTCCACAGCAT
CACTATTACGCTACACCACGTAGGGAGATGGCTAAACGAGATGGTTCATA
GGATGAGAACAAGAAGCTTGAGGAGACCGAAAAGAAAGCGCGGCTTATTG
TTAACGAACGCCTCGATTCTCTGCTGTATGATATTCAGGACGTCATGGCT
GCCAAAGGGAATCCCCGCAGTGAGAAAGCGGACATCGATCTAGACGAAGC
GTGAGTTGCGGCTGTCTGCTGGGTGTGCTCATTAATCTCTGACCCTCTTA
TCATAGTTTGCGCGCAAAGATCAAAACTATTGGCGAGAAATTTGAAATGC
GCGAGTTACATTACAAGGCACTCCTTCGCAGCAAGGATGCCGAGATACAA
TGCCTTACCGCCAAGTACGAAGAGCAGCGCCGTACAGCCGAGAATGAAGC
CGCTCGTTGTCGTGCTCTGAGCTCCCAGGTCTCTACCTTCTCGCATACCG
AAGCCGAACTACGCAGTCAACTAAACATCTACGTGGAAAAGTTCAAGCAG
GTATGGACCGATGTCGATGGCTTGCTCGGCCTCAGCCTCGTTTTGACCGC
TGGTAATAATAATATCGCAGGTGGAGGATACGCTGAACAACAGCAACGAG
CTTTTTCTTACGTTTCGCAAAGAAATGGAAGAGATGTCCAAAAAGACCAA
ACGGCTAGAGAAGGAAAACCACACCCTTACACGGAAGCACGATCAAACGA
ACCGCAACATACTCGAGATGGCGGAGGAGCGCACAAGGAATCATGAGGAG
TTAGAAAAGTGGCGAAAGAAAAGCCATCATTTGGAAGCACTTTGTCGTCG
AATGCAAGCCCAGGGTCGCGGGCAAGGTCTTGCTGCGGATTTGGATGGCG
ATGACGAGGGGACGGAGAGTGAATATGATGAGGACTATGAAGACGAGGAA
GATGATGAAGGAATCAGTGACGATGACTACGAGCTCGACAGCCCGGATGG
CGACATGAACGGAGACCGCAATATTCCCCAGCAAACCGAAAAGCCAGTAT
TTGGGCCTCCCCCGCCGCCCAACCTGCTGGAAGCGCGAGCCAACGGAAAT
AAGGCAATGATCAATGGATGCCACTAATGCAGTTTTCATCAATGTCATGT
TCTCGTTGTTCATGTTTCCTTGGGCTTGTGACCAAACACGATTGCGAAGT
CTTCGTCATTTGCGCTGGCAATGCCGCAATTGTCTCGGGTGTTCTTTTAC
GTCTCTGTTCAGCTGCGTGGTAGTTGGCCTTGATGAGTTGAAAATTTGCC
CCTCGAGAGCGTGCATTGGCAACTGCGCAGTGTGGCGCTGGTCGCTCGGG
GTCTCTCCTGTCTCCGTATGCAGATCTTGTAGCGGTTCGGCTCTTTAAAG
ATAGGTTGCCCTGCTCATTTAGGTTGCTGTCAGCCTTGAATTGCAACATG
CACCATCACAGCTGTGGGGGTTTTGCAAGTCGTGG back to topCoding sequence (CDS) from alignment at ch6:2335273..2337657- >KJC3_008538-T1 ID=KJC3_008538-T1|Name=KJC3_008538-T1|organism=Aspergillus niger KJC3|type=CDS|length=6570bp|location=Sequence derived from alignment at ch6:2335273..2337657- (Aspergillus niger KJC3) GTGGAGGATACGCTGAACAACAGCAACGAGCTTTTTCTTACGTTTCGCAA AGAAATGGAAGAGATGTCCAAAAAGACCAAACGGCTAGAGAAGGAAAACC ACACCCTTACACGGAAGCACGATCAAACGAACCGCAACATACTCGAGATG GCGGAGGAGCGCACAAGGAATCATGAGGAGTTAGAAAAGTGGCGAAAGAA AAGCCATCATTTGGAAGCACTTTGTCGTCGAATGCAAGCCCAGGGTCGCG GGCAAGGTCTTGCTGCGGATTTGGATGGCGATGACGAGGGGACGGAGAGT GAATATGATGAGGACTATGAAGACGAGGAAGATGATGAAGGAATCAGTGA CGATGACTACGAGCTCGACAGCCCGGATGGCGACATGAACGGAGACCGCA ATATTCCCCAGCAAACCGAAAAGCCAGTATTTGGGCCTCCCCCGCCGCCC AACCTGCTGGAAGCGCGAGCCAACGGAAATAAGGCAATGATCAATGGATG CCACTAATTTGCGCGCAAAGATCAAAACTATTGGCGAGAAATTTGAAATG CGCGAGTTACATTACAAGGCACTCCTTCGCAGCAAGGATGCCGAGATACA ATGCCTTACCGCCAAGTACGAAGAGCAGCGCCGTACAGCCGAGAATGAAG CCGCTCGTTGTCGTGCTCTGAGCTCCCAGGTCTCTACCTTCTCGCATACC GAAGCCGAACTACGCAGTCAACTAAACATCTACGTGGAAAAGTTCAAGCA GGATGAGAACAAGAAGCTTGAGGAGACCGAAAAGAAAGCGCGGCTTATTG TTAACGAACGCCTCGATTCTCTGCTGTATGATATTCAGGACGTCATGGCT GCCAAAGGGAATCCCCGCAGTGAGAAAGCGGACATCGATCTAGACGAAGC AGCGCGAAGTTAAGAAGGCTACGAGGGACCTGAACCAACTCCTTAGCAAT ATCGAATCTCCGATGACACGGCTCGAGACGGTTCACAAAAAGTACACCGA ACTACTGGCCGATATGAAGAAGCTAGATCGCGACTATTCTAAGAGCAAGA AGCGGGCCGATCAACTGCAGAAGGATCAGGACAAGGGCAAATCCGAGTTG AACAAAACCGTTACTATGAAGGATAAATTAGAAAAGCTGTGTAGGGAGCT AACCAAGGAAAATAAGAAGGTCAAGATGTCTGCTGCAGCAATGTCGAAAA AGAACAAGGGGAAGAAGGTCGCAGACCCCAATGAGACATCCAAGCTCTTG GCTGCCAAAATATCGCAGTTGGAGCAAGATGCTGCCGGAGAAAAGGATCA GGAGGCAGAAATCGGTGGAGGATACGCTGAACAACAGCAACGAGCTTTTT CTTACGTTTCGCAAAGAAATGGAAGAGATGTCCAAAAAGACCAAACGGCT AGAGAAGGAAAACCACACCCTTACACGGAAGCACGATCAAACGAACCGCA ACATACTCGAGATGGCGGAGGAGCGCACAAGGAATCATGAGGAGTTAGAA AAGTGGCGAAAGAAAAGCCATCATTTGGAAGCACTTTGTCGTCGAATGCA AGCCCAGGGTCGCGGGCAAGGTCTTGCTGCGGATTTGGATGGCGATGACG AGGGGACGGAGAGTGAATATGATGAGGACTATGAAGACGAGGAAGATGAT GAAGGAATCAGTGACGATGACTACGAGCTCGACAGCCCGGATGGCGACAT GAACGGAGACCGCAATATTCCCCAGCAAACCGAAAAGCCAGTATTTGGGC CTCCCCCGCCGCCCAACCTGCTGGAAGCGCGAGCCAACGGAAATAAGGCA ATGATCAATGGATGCCACTAATTTGCGCGCAAAGATCAAAACTATTGGCG AGAAATTTGAAATGCGCGAGTTACATTACAAGGCACTCCTTCGCAGCAAG GATGCCGAGATACAATGCCTTACCGCCAAGTACGAAGAGCAGCGCCGTAC AGCCGAGAATGAAGCCGCTCGTTGTCGTGCTCTGAGCTCCCAGGTCTCTA CCTTCTCGCATACCGAAGCCGAACTACGCAGTCAACTAAACATCTACGTG GAAAAGTTCAAGCAGGATGAGAACAAGAAGCTTGAGGAGACCGAAAAGAA AGCGCGGCTTATTGTTAACGAACGCCTCGATTCTCTGCTGTATGATATTC AGGACGTCATGGCTGCCAAAGGGAATCCCCGCAGTGAGAAAGCGGACATC GATCTAGACGAAGCAGCGCGAAGTTAAGAAGGCTACGAGGGACCTGAACC AACTCCTTAGCAATATCGAATCTCCGATGACACGGCTCGAGACGGTTCAC AAAAAGTACACCGAACTACTGGCCGATATGAAGAAGCTAGATCGCGACTA TTCTAAGAGCAAGAAGCGGGCCGATCAACTGCAGAAGGATCAGGACAAGG GCAAATCCGAGTTGAACAAAACCGTTACTATGAAGGATAAATTAGAAAAG CTGTGTAGGGAGCTAACCAAGGAAAATAAGAAGGTCAAGATGTCTGCTGC AGCAATGTCGAAAAAGAACAAGGGGAAGAAGGTCGCAGACCCCAATGAGA CATCCAAGCTCTTGGCTGCCAAAATATCGCAGTTGGAGCAAGATGCTGCC GGAGAAAAGGATCAGGAGGCAGAAATCGGTGGAGGATACGCTGAACAACA GCAACGAGCTTTTTCTTACGTTTCGCAAAGAAATGGAAGAGATGTCCAAA AAGACCAAACGGCTAGAGAAGGAAAACCACACCCTTACACGGAAGCACGA TCAAACGAACCGCAACATACTCGAGATGGCGGAGGAGCGCACAAGGAATC ATGAGGAGTTAGAAAAGTGGCGAAAGAAAAGCCATCATTTGGAAGCACTT TGTCGTCGAATGCAAGCCCAGGGTCGCGGGCAAGGTCTTGCTGCGGATTT GGATGGCGATGACGAGGGGACGGAGAGTGAATATGATGAGGACTATGAAG ACGAGGAAGATGATGAAGGAATCAGTGACGATGACTACGAGCTCGACAGC CCGGATGGCGACATGAACGGAGACCGCAATATTCCCCAGCAAACCGAAAA GCCAGTATTTGGGCCTCCCCCGCCGCCCAACCTGCTGGAAGCGCGAGCCA ACGGAAATAAGGCAATGATCAATGGATGCCACTAATTTGCGCGCAAAGAT CAAAACTATTGGCGAGAAATTTGAAATGCGCGAGTTACATTACAAGGCAC TCCTTCGCAGCAAGGATGCCGAGATACAATGCCTTACCGCCAAGTACGAA GAGCAGCGCCGTACAGCCGAGAATGAAGCCGCTCGTTGTCGTGCTCTGAG CTCCCAGGTCTCTACCTTCTCGCATACCGAAGCCGAACTACGCAGTCAAC TAAACATCTACGTGGAAAAGTTCAAGCAGGATGAGAACAAGAAGCTTGAG GAGACCGAAAAGAAAGCGCGGCTTATTGTTAACGAACGCCTCGATTCTCT GCTGTATGATATTCAGGACGTCATGGCTGCCAAAGGGAATCCCCGCAGTG AGAAAGCGGACATCGATCTAGACGAAGCAGCGCGAAGTTAAGAAGGCTAC GAGGGACCTGAACCAACTCCTTAGCAATATCGAATCTCCGATGACACGGC TCGAGACGGTTCACAAAAAGTACACCGAACTACTGGCCGATATGAAGAAG CTAGATCGCGACTATTCTAAGAGCAAGAAGCGGGCCGATCAACTGCAGAA GGATCAGGACAAGGGCAAATCCGAGTTGAACAAAACCGTTACTATGAAGG ATAAATTAGAAAAGCTGTGTAGGGAGCTAACCAAGGAAAATAAGAAGGTC AAGATGTCTGCTGCAGCAATGTCGAAAAAGAACAAGGGGAAGAAGGTCGC AGACCCCAATGAGACATCCAAGCTCTTGGCTGCCAAAATATCGCAGTTGG AGCAAGATGCTGCCGGAGAAAAGGATCAGGAGGCAGAAATCGGTGGAGGA TACGCTGAACAACAGCAACGAGCTTTTTCTTACGTTTCGCAAAGAAATGG AAGAGATGTCCAAAAAGACCAAACGGCTAGAGAAGGAAAACCACACCCTT ACACGGAAGCACGATCAAACGAACCGCAACATACTCGAGATGGCGGAGGA GCGCACAAGGAATCATGAGGAGTTAGAAAAGTGGCGAAAGAAAAGCCATC ATTTGGAAGCACTTTGTCGTCGAATGCAAGCCCAGGGTCGCGGGCAAGGT CTTGCTGCGGATTTGGATGGCGATGACGAGGGGACGGAGAGTGAATATGA TGAGGACTATGAAGACGAGGAAGATGATGAAGGAATCAGTGACGATGACT ACGAGCTCGACAGCCCGGATGGCGACATGAACGGAGACCGCAATATTCCC CAGCAAACCGAAAAGCCAGTATTTGGGCCTCCCCCGCCGCCCAACCTGCT GGAAGCGCGAGCCAACGGAAATAAGGCAATGATCAATGGATGCCACTAAT TTGCGCGCAAAGATCAAAACTATTGGCGAGAAATTTGAAATGCGCGAGTT ACATTACAAGGCACTCCTTCGCAGCAAGGATGCCGAGATACAATGCCTTA CCGCCAAGTACGAAGAGCAGCGCCGTACAGCCGAGAATGAAGCCGCTCGT TGTCGTGCTCTGAGCTCCCAGGTCTCTACCTTCTCGCATACCGAAGCCGA ACTACGCAGTCAACTAAACATCTACGTGGAAAAGTTCAAGCAGGATGAGA ACAAGAAGCTTGAGGAGACCGAAAAGAAAGCGCGGCTTATTGTTAACGAA CGCCTCGATTCTCTGCTGTATGATATTCAGGACGTCATGGCTGCCAAAGG GAATCCCCGCAGTGAGAAAGCGGACATCGATCTAGACGAAGCAGCGCGAA GTTAAGAAGGCTACGAGGGACCTGAACCAACTCCTTAGCAATATCGAATC TCCGATGACACGGCTCGAGACGGTTCACAAAAAGTACACCGAACTACTGG CCGATATGAAGAAGCTAGATCGCGACTATTCTAAGAGCAAGAAGCGGGCC GATCAACTGCAGAAGGATCAGGACAAGGGCAAATCCGAGTTGAACAAAAC CGTTACTATGAAGGATAAATTAGAAAAGCTGTGTAGGGAGCTAACCAAGG AAAATAAGAAGGTCAAGATGTCTGCTGCAGCAATGTCGAAAAAGAACAAG GGGAAGAAGGTCGCAGACCCCAATGAGACATCCAAGCTCTTGGCTGCCAA AATATCGCAGTTGGAGCAAGATGCTGCCGGAGAAAAGGATCAGGAGGCAG AAATCGGTGGAGGATACGCTGAACAACAGCAACGAGCTTTTTCTTACGTT TCGCAAAGAAATGGAAGAGATGTCCAAAAAGACCAAACGGCTAGAGAAGG AAAACCACACCCTTACACGGAAGCACGATCAAACGAACCGCAACATACTC GAGATGGCGGAGGAGCGCACAAGGAATCATGAGGAGTTAGAAAAGTGGCG AAAGAAAAGCCATCATTTGGAAGCACTTTGTCGTCGAATGCAAGCCCAGG GTCGCGGGCAAGGTCTTGCTGCGGATTTGGATGGCGATGACGAGGGGACG GAGAGTGAATATGATGAGGACTATGAAGACGAGGAAGATGATGAAGGAAT CAGTGACGATGACTACGAGCTCGACAGCCCGGATGGCGACATGAACGGAG ACCGCAATATTCCCCAGCAAACCGAAAAGCCAGTATTTGGGCCTCCCCCG CCGCCCAACCTGCTGGAAGCGCGAGCCAACGGAAATAAGGCAATGATCAA TGGATGCCACTAATTTGCGCGCAAAGATCAAAACTATTGGCGAGAAATTT GAAATGCGCGAGTTACATTACAAGGCACTCCTTCGCAGCAAGGATGCCGA GATACAATGCCTTACCGCCAAGTACGAAGAGCAGCGCCGTACAGCCGAGA ATGAAGCCGCTCGTTGTCGTGCTCTGAGCTCCCAGGTCTCTACCTTCTCG CATACCGAAGCCGAACTACGCAGTCAACTAAACATCTACGTGGAAAAGTT CAAGCAGGATGAGAACAAGAAGCTTGAGGAGACCGAAAAGAAAGCGCGGC TTATTGTTAACGAACGCCTCGATTCTCTGCTGTATGATATTCAGGACGTC ATGGCTGCCAAAGGGAATCCCCGCAGTGAGAAAGCGGACATCGATCTAGA CGAAGCAGCGCGAAGTTAAGAAGGCTACGAGGGACCTGAACCAACTCCTT AGCAATATCGAATCTCCGATGACACGGCTCGAGACGGTTCACAAAAAGTA CACCGAACTACTGGCCGATATGAAGAAGCTAGATCGCGACTATTCTAAGA GCAAGAAGCGGGCCGATCAACTGCAGAAGGATCAGGACAAGGGCAAATCC GAGTTGAACAAAACCGTTACTATGAAGGATAAATTAGAAAAGCTGTGTAG GGAGCTAACCAAGGAAAATAAGAAGGTCAAGATGTCTGCTGCAGCAATGT CGAAAAAGAACAAGGGGAAGAAGGTCGCAGACCCCAATGAGACATCCAAG CTCTTGGCTGCCAAAATATCGCAGTTGGAGCAAGATGCTGCCGGAGAAAA GGATCAGGAGGCAGAAATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0019905 | syntaxin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008538-T1.utr3p1 | KJC3_008538-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008538-T1.utr5p1 | KJC3_008538-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR026183 |
DBxref | PFAM:PF09728 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2335273..2337657 - |
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