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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2344802..2346505- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008541-T1 ID=KJC3_008541-T1|Name=KJC3_008541-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1704bp|location=Sequence derived from alignment at ch6:2344802..2346505- (Aspergillus niger KJC3)
GGGGAATCTCCCCTCGTTATTATCTCCGCCTCTCCAATGCTGCTGTTATC
GTATACCAACTCCCTTTTCTGCCGAAATATACCCCCCGAAACACTCCGAG
ATCCCCATTCCCAGCACAGCTATCCCATGGGGATACCTGATTTTACTTTG
AAGTGATCTCATCGCTCCTGCGGTCGCGGCGTGGCTCTGGGCCAACGTCG
CATCCCTACCGTCATCCGACATGATGCGATCGAGAGACCCTCGGGTCCGC
CAGACAATCAATCAGATTCATCATAATCTCGAGTCTGCAAATGAGACCGC
CCAGGAGGGTCTTTATACTTTCTCACATAATTACGTGGTACCCTGTTTTG
CAGCGATTGGGACCTGTATCTACTCGTGCACTGCGCCTTGTCTCCCTAGC
CGCGAAGATCAGCTTCGACGCCGCCGACGCGGCCGCGCAGAGGCTAATTT
CGACTTCTACGATGACTGGGACAATGAGGATCCGAACGATGGTCTGCTAG
GATGGGGTACTGACGAACTTGATCGCTTGCTGGCTGGAAGTGGCTTGGCT
CGTGGGAGTTCCGAACAGCCTCGAAGGCAGCGGAAAATGAGCTATGGTGC
TCGTCGCACGAGGCGGAAGAGCACTGCTATAATGTCTGACGACCGTAATG
ACCCAACTGTTATTCCGAGTTCCTCCTTCCTGGGGTTTCTAGAGCGCTTC
CCGTGGAGATTCGGCGCTCGGGGGCTGAAATATCGCCCGTCCGCAGCAGA
TCTTCAAGAACATCCCGTGGGCTTGCGACGGCATGAACTTGAAGATGAGC
CTCTCATAGAAGAAACTGAGGAAAGCGAGGGCCCAGCAACCTCAAGAGTG
AATGGGAGATATCGGAGTTCAACACAGTCATCGCGTGACACGACCAATTC
CTTGAGCTCGCGGGGTGACTTGATTCCCAGCGACGAGGAAGAGGATGCAG
TGCCACTAGATGATGAGTTCGCTCTAGCTCTGGCCAGCCGTCGCGGTACT
GGACTCGATTCAATTGATCTGATAGGAGATAAACCTGCAAGTATGAGGTC
AGTGTCTGGGACGTTTAGCTTAAGAACAACCGCCTCCTCGAAGGAGAGAA
AGAAGAAGAAAAAGAGAAGCAGCCGCCTGCGGTCTCCGGAGGGGTCGTAT
GTAGAGGTCACTCGTCAAGCTAGCACCCCTACATTAGCCGATCTCAAAAA
AGAAGAAGAGCAAGCAGCGCTCGAAGAAGAATCAGAGATTGCACGAAGAC
GGCTTGCTGCACAGCAGCTGGCTTCAACACGAGGCTTACACCAAGCAAAA
GACGAGGTAGGTAGCTCCATTATTGGTTGGTCTCATGCCAGAATAATAGA
TGACGGGCTAACATAACAATCACGTAGGCTTCACAAAATTCACCATCTCC
ACAACTTCACATCCCTTCGCTGGGCGCCGGTCATCACGAGCCCGCCGATA
CTCCTTTAGACTCCACTGTAGAACACACAGTCCCTCAAAGTCAGGATGTA
CAATCTCAGTCCTCGCTGAATCCGGGTTCCCCCGGAATCGACTCACAAAC
CGAACCATTCCCCCCATTTCCATCCACGCCCGAATTTCGCGATGCTAGTC
CTGCGTCGCATCCTGGCCATTTCCACGACCAAAGCAATGCCTCGAAGTTA
TCTGATCAGGAAGATACAGCAGATGCTCCGAGGGATGATGCCTCTATCGA
TTAA back to topCoding sequence (CDS) from alignment at ch6:2344802..2346505- >KJC3_008541-T1 ID=KJC3_008541-T1|Name=KJC3_008541-T1|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch6:2344802..2346505- (Aspergillus niger KJC3)
GCTTCACAAAATTCACCATCTCCACAACTTCACATCCCTTCGCTGGGCGC
CGGTCATCACGAGCCCGCCGATACTCCTTTAGACTCCACTGTAGAACACA
CAGTCCCTCAAAGTCAGGATGTACAATCTCAGTCCTCGCTGAATCCGGGT
TCCCCCGGAATCGACTCACAAACCGAACCATTCCCCCCATTTCCATCCAC
GCCCGAATTTCGCGATGCTAGTCCTGCGTCGCATCCTGGCCATTTCCACG
ACCAAAGCAATGCCTCGAAGTTATCTGATCAGGAAGATACAGCAGATGCT
CCGAGGGATGATGCCTCTATCGATTAAATGATGCGATCGAGAGACCCTCG
GGTCCGCCAGACAATCAATCAGATTCATCATAATCTCGAGTCTGCAAATG
AGACCGCCCAGGAGGGTCTTTATACTTTCTCACATAATTACGTGGTACCC
TGTTTTGCAGCGATTGGGACCTGTATCTACTCGTGCACTGCGCCTTGTCT
CCCTAGCCGCGAAGATCAGCTTCGACGCCGCCGACGCGGCCGCGCAGAGG
CTAATTTCGACTTCTACGATGACTGGGACAATGAGGATCCGAACGATGGT
CTGCTAGGATGGGGTACTGACGAACTTGATCGCTTGCTGGCTGGAAGTGG
CTTGGCTCGTGGGAGTTCCGAACAGCCTCGAAGGCAGCGGAAAATGAGCT
ATGGTGCTCGTCGCACGAGGCGGAAGAGCACTGCTATAATGTCTGACGAC
CGTAATGACCCAACTGTTATTCCGAGTTCCTCCTTCCTGGGGTTTCTAGA
GCGCTTCCCGTGGAGATTCGGCGCTCGGGGGCTGAAATATCGCCCGTCCG
CAGCAGATCTTCAAGAACATCCCGTGGGCTTGCGACGGCATGAACTTGAA
GATGAGCCTCTCATAGAAGAAACTGAGGAAAGCGAGGGCCCAGCAACCTC
AAGAGTGAATGGGAGATATCGGAGTTCAACACAGTCATCGCGTGACACGA
CCAATTCCTTGAGCTCGCGGGGTGACTTGATTCCCAGCGACGAGGAAGAG
GATGCAGTGCCACTAGATGATGAGTTCGCTCTAGCTCTGGCCAGCCGTCG
CGGTACTGGACTCGATTCAATTGATCTGATAGGAGATAAACCTGCAAGTA
TGAGGTCAGTGTCTGGGACGTTTAGCTTAAGAACAACCGCCTCCTCGAAG
GAGAGAAAGAAGAAGAAAAAGAGAAGCAGCCGCCTGCGGTCTCCGGAGGG
GTCGTATGTAGAGGTCACTCGTCAAGCTAGCACCCCTACATTAGCCGATC
TCAAAAAAGAAGAAGAGCAAGCAGCGCTCGAAGAAGAATCAGAGATTGCA
CGAAGACGGCTTGCTGCACAGCAGCTGGCTTCAACACGAGGCTTACACCA
AGCAAAAGACGAGGCTTCACAAAATTCACCATCTCCACAACTTCACATCC
CTTCGCTGGGCGCCGGTCATCACGAGCCCGCCGATACTCCTTTAGACTCC
ACTGTAGAACACACAGTCCCTCAAAGTCAGGATGTACAATCTCAGTCCTC
GCTGAATCCGGGTTCCCCCGGAATCGACTCACAAACCGAACCATTCCCCC
CATTTCCATCCACGCCCGAATTTCGCGATGCTAGTCCTGCGTCGCATCCT
GGCCATTTCCACGACCAAAGCAATGCCTCGAAGTTATCTGATCAGGAAGA
TACAGCAGATGCTCCGAGGGATGATGCCTCTATCGATTAAATGATGCGAT
CGAGAGACCCTCGGGTCCGCCAGACAATCAATCAGATTCATCATAATCTC
GAGTCTGCAAATGAGACCGCCCAGGAGGGTCTTTATACTTTCTCACATAA
TTACGTGGTACCCTGTTTTGCAGCGATTGGGACCTGTATCTACTCGTGCA
CTGCGCCTTGTCTCCCTAGCCGCGAAGATCAGCTTCGACGCCGCCGACGC
GGCCGCGCAGAGGCTAATTTCGACTTCTACGATGACTGGGACAATGAGGA
TCCGAACGATGGTCTGCTAGGATGGGGTACTGACGAACTTGATCGCTTGC
TGGCTGGAAGTGGCTTGGCTCGTGGGAGTTCCGAACAGCCTCGAAGGCAG
CGGAAAATGAGCTATGGTGCTCGTCGCACGAGGCGGAAGAGCACTGCTAT
AATGTCTGACGACCGTAATGACCCAACTGTTATTCCGAGTTCCTCCTTCC
TGGGGTTTCTAGAGCGCTTCCCGTGGAGATTCGGCGCTCGGGGGCTGAAA
TATCGCCCGTCCGCAGCAGATCTTCAAGAACATCCCGTGGGCTTGCGACG
GCATGAACTTGAAGATGAGCCTCTCATAGAAGAAACTGAGGAAAGCGAGG
GCCCAGCAACCTCAAGAGTGAATGGGAGATATCGGAGTTCAACACAGTCA
TCGCGTGACACGACCAATTCCTTGAGCTCGCGGGGTGACTTGATTCCCAG
CGACGAGGAAGAGGATGCAGTGCCACTAGATGATGAGTTCGCTCTAGCTC
TGGCCAGCCGTCGCGGTACTGGACTCGATTCAATTGATCTGATAGGAGAT
AAACCTGCAAGTATGAGGTCAGTGTCTGGGACGTTTAGCTTAAGAACAAC
CGCCTCCTCGAAGGAGAGAAAGAAGAAGAAAAAGAGAAGCAGCCGCCTGC
GGTCTCCGGAGGGGTCGTATGTAGAGGTCACTCGTCAAGCTAGCACCCCT
ACATTAGCCGATCTCAAAAAAGAAGAAGAGCAAGCAGCGCTCGAAGAAGA
ATCAGAGATTGCACGAAGACGGCTTGCTGCACAGCAGCTGGCTTCAACAC
GAGGCTTACACCAAGCAAAAGACGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008541-T1.utr5p1 | KJC3_008541-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2344802..2346505 - |
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