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KJC3_008552-T1, KJC3_008552-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008552-T1
Unique NameKJC3_008552-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2369001..2370843-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008552-T1 ID=KJC3_008552-T1|Name=KJC3_008552-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1843bp|location=Sequence derived from alignment at ch6:2369001..2370843- (Aspergillus niger KJC3)
ATCAAACCTCCCAGCATCCCGAGTCCGCCTCCAATACTTGTTTCCTCCCT
CCATCTCGAGCTATCCACCTCATCCAGCCCCCCCTTTTGTGCTTGTATCG
TGGGCGCCATTCTCTCTTGACTTTTTTTCCTCGTGAAAGTTGCTCCTTAA
ACCATATCGACTATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGC
CAGGTTCGCTCAGTTCAAGCTTGTATTGCTGGGTTGGTATCCCCCTGTTA
TTGGCCCCACTATAGTGTGCGACAAAAGTACTGACATGTTGTTTTCGTTC
GCCCTTTCTAGGAGAGTCCGCGGTCGGAAAGGTTGGGATTTTGTGATCTT
CAGGGTTCTAAATAGCGGTCGCTGACTTTCTGGCTCCACAGAGTTCGCTA
GTACTGAGATTCGTCAAGGTGGGATAATTCGTCGATATTTCCGGAAATTT
TTCTTACGAAAGGACGGTTTTTTTTGGTTGACTTACTGGGACTAACACTG
CATAAGGATCAATTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTT
CCTCACACAAACCATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGA
TATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTAT
TACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTGT
ATGATTCCCGGCTCGACCTATTCCTTTCCTACAGTAACTAATTGGTCGTA
ACGTTGAGCAGTCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTG
CAGCGTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCT
CGATCTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACG
CCGAAGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCA
AAGACCTCCTCCAACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACT
CCCTCTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTG
GTGTTGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGC
AACTGCTAGGCTTTCCAAGTGGCGTGTACTAACTGTTGTGTGTCGATTCT
TCGATCTAATCCCCCTTTCTTCCTTTCCTCCTTTCGCATGGTCTGTTGTT
AGATGCAGGAGACGTGTGTCTTCTAGCTTGAATGTGAACCGGCACGCTGG
GCAAACAGTGTGCAACCCGTCAGCGACTTCGAACAAGACTGTTTTATGGC
TTTCTAATGGTGCCGTGATTACTGCAACTTTGGCCGATCGGCGTCGTATA
GGTGTCTCTTGCTTCCCAGGGGATTCGGTTATCCCTACGGATTTGAACTT
GATGATCCGTTCAATCTTAATCAGTCTTTCTCACTGGACTTGATCTGACA
AGACGAAACTTTTCAAATACCGTCATTGGATGTGGGGAGAGAGCTTTATA
CTGTACTGGCACGGTTGGATTTGACTGTCTAGACATTATGCGACAGGGAT
GAACCTATGATTTCTTTGTTCCGCGTTGTTCTATCTGTCTCTGCTTCCTC
TTCTGCTGGCGTCTGTATCCTTCTGATGGGTTGAATTCATGTTACTTTCT
TACTTTTCTTTGTCGTTCTTCCTGAGACTCTCAGTATGCTATGCCTATAT
AATACTCCACCTTCAGTCATCGGATCTGAACTAGCCATCTATTAATTCCA
GTGACATACGCATAGTAGGTGTTTGGAGCAAGGTGAAGTGAGTCTTGTAG
ATGCAAATAATAGATAAACAACTATATTCTATACAATAACTAG
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Coding sequence (CDS) from alignment at ch6:2369001..2370843-

>KJC3_008552-T1 ID=KJC3_008552-T1|Name=KJC3_008552-T1|organism=Aspergillus niger KJC3|type=CDS|length=3285bp|location=Sequence derived from alignment at ch6:2369001..2370843- (Aspergillus niger KJC3)
TCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTGCAGCGTCAGGC
AAATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCTCGATCTGGTGA
CGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACGCCGAAGCCTAT
GCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCAAAGACCTCCTC
CAACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACTCCCTCTTGATC
AGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTGGTGTTGACCTG
CGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGCAACTGCTAGGA
TCAATTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTTCCTCACAC
AAACCATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGATATGGGAT
ACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTATTACAGAAA
CGCCAACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTAGTTCGCTAG
TACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAAGATGGCCTCCAGAG
CCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTCAGTTCAAGCTTGTA
TTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAATTGCAGC
GTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAGGAAACAAGCTCGAT
CTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTGACGCCGA
AGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCTGCAAAGA
CCTCCTCCAACGTTAAGGAACTATTCACAGCAATCGCGAAGAAACTCCCT
CTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTCCTGGTGT
TGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCCTGCAACT
GCTAGGATCAATTTGATGATTACCGCGAGTCGACCATTGGCGCCGCCTTC
CTCACACAAACCATCTCCCTGGACGAAAGCACGACGGTTAAGTTCGAGAT
ATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCCATGTATT
ACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATATCACTCAGGCTAGT
TCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAAGATGGCC
TCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTCAGTTCAA
GCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGTGAAGGAA
TTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAGGAAACAA
GCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCTACGGCTG
ACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGAGACATCT
GCAAAGACCTCCTCCAACGTTAAGGAACTATTCACAGCAATCGCGAAGAA
ACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACTCCCCGTC
CTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGCCGGTTCC
TGCAACTGCTAGGATCAATTTGATGATTACCGCGAGTCGACCATTGGCGC
CGCCTTCCTCACACAAACCATCTCCCTGGACGAAAGCACGACGGTTAAGT
TCGAGATATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCTGGCCCCC
ATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATATCACTCA
GGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGGTCGGAAA
GATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGGTTCGCTC
AGTTCAAGCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGTCGTGGGT
GAAGGAATTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCCCTTGCAG
GAAACAAGCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGCCATTCCT
ACGGCTGACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGTTCTTTGA
GACATCTGCAAAGACCTCCTCCAACGTTAAGGAACTATTCACAGCAATCG
CGAAGAAACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCGCACAACT
CCCCGTCCTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCCAAGGTGC
CGGTTCCTGCAACTGCTAGGATCAATTTGATGATTACCGCGAGTCGACCA
TTGGCGCCGCCTTCCTCACACAAACCATCTCCCTGGACGAAAGCACGACG
GTTAAGTTCGAGATATGGGATACAGCCGGCCAGGAGAGATACAAGTCTCT
GGCCCCCATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTGTACGATA
TCACTCAGGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAGTCCGCGG
TCGGAAAGATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGGGGCCAGG
TTCGCTCAGTTCAAGCTTGTATTGCTGGTCATCACTGGACAAGGCCAAGT
CGTGGGTGAAGGAATTGCAGCGTCAGGCAAATGAGAACATCGTCATCGCC
CTTGCAGGAAACAAGCTCGATCTGGTGACGGAGAGCCCGGACAAGAGAGC
CATTCCTACGGCTGACGCCGAAGCCTATGCACGTGAAGCTGGTCTTCTGT
TCTTTGAGACATCTGCAAAGACCTCCTCCAACGTTAAGGAACTATTCACA
GCAATCGCGAAGAAACTCCCTCTTGATCAGGCGGGTCCTCGAAACCTGCG
CACAACTCCCCGTCCTGGTGTTGACCTGCGGCCAGAAGCACCCGGTACCC
AAGGTGCCGGTTCCTGCAACTGCTAGGATCAATTTGATGATTACCGCGAG
TCGACCATTGGCGCCGCCTTCCTCACACAAACCATCTCCCTGGACGAAAG
CACGACGGTTAAGTTCGAGATATGGGATACAGCCGGCCAGGAGAGATACA
AGTCTCTGGCCCCCATGTATTACAGAAACGCCAACTGCGCGGTCGTTGTG
TACGATATCACTCAGGCTAGTTCGCTAGTACTGAGATTCGTCAAGGAGAG
TCCGCGGTCGGAAAGATGGCCTCCAGAGCCGCAGCAGGCGCCCGTCCCGG
GGCCAGGTTCGCTCAGTTCAAGCTTGTATTGCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT5KJC3_008552Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008552-T1KJC3_008552-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008552-T1.cdsKJC3_008552-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008552-T1.utr3p1KJC3_008552-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008552-T1.exon5KJC3_008552-T1.exon5Aspergillus niger KJC3exon
KJC3_008552-T1.exon4KJC3_008552-T1.exon4Aspergillus niger KJC3exon
KJC3_008552-T1.exon3KJC3_008552-T1.exon3Aspergillus niger KJC3exon
KJC3_008552-T1.exon2KJC3_008552-T1.exon2Aspergillus niger KJC3exon
KJC3_008552-T1.exon1KJC3_008552-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008552-T1.utr5p1KJC3_008552-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductGTPase Ypt5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2369001..2370843 -
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