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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2378415..2381208+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008556-T1 ID=KJC3_008556-T1|Name=KJC3_008556-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2794bp|location=Sequence derived from alignment at ch6:2378415..2381208+ (Aspergillus niger KJC3)
CTTGTCCCTCTCCTGAAAATCAACAAGTCGTGTACCTTATTTCTTGCTTT
CTCGGTGTTGATGGATTATTACAGTCCTTCTTGCCATTCCGGCCCATCTT
GTTCCTCTGCGTGTCGGGGTTCCTTTCAGTAGTTGATGCACATTGATCGT
CAGTCGTATACCTGAAGTGGGTTTACGTCGTCATCACTACGCGGCAACCA
GCCTCAAGAATGATTGTACTGATTAAGCTAGACGAACGTGTCCTTTATTC
TCCACGACTACTCTGCTGATTGGTAGCTAAATATCGGATCGCACATGGCA
CCATCTTGCTCAGGCTTTACCCGATAATCTTCTCAGCTCTTAGAACAGTA
TACGGCAAGATGGGACTGAGCCAGTCGACTGAGTATGGGGGCCAGACGTC
CTCTTCAGGTTAGTAGTCGTTGCCGTCTTTCGTAATGGAGCCATAATATC
CCATCACAATGATAAAGATGGCTCTTCAGAGAAAAGCAACCCTGTCTCTG
ACAAGACCTTAGAGGAGCTGAGCTACGTGCTTGCTGAACGGTTTGCAACT
AAATGCTTCACTCCCTTGGAGTTGACTCATCTCAAAGACAACTTCTTTTC
GCGTGCCATTGACCAAGGCGGCTTGAAGTACTGGAATGAGAAGACACTCT
CGGATTTTCTAGGGATTCCGGATAGCAGTGAATCCCACTGTCCTCTGGAT
GCGGGCCCGGTGATCTTCCGTATGGTCTCGTACCTTGGGGCATTTCCCTT
CCAGAACACGCTAGCTCCGAGTGTTCTAACGTTCGAAGCTATGGTGAAAG
TCGTTGTTTTGCTGACTGAGCGATACGGGAAAGTCCTAAGACGAGCGCGC
AGGGATAGGATACGGCTTCTTTTCGGAAGCCTTGCTGATGTTGGAAGGAA
GAGTGTTGAACAGCACACTAATGGCGATGAAGTGAGCGAGGATGCTGATG
CACCTGCGCCGAACTCTCATGTCCCAGGCTTTGCCATCGATGAGCCGGCC
AACGATGATTATGAGGACGAGGAGGACGATGATCTAGCATTAGCTGCTTT
GGAATCCTTGGATGCCATTGAGGTCTTCAAGCACGATTCACGTATGGACA
GGGCTGTCTACGAAGCTCGGATATCTGCCGATACGCTCCGTCGACTCTTG
ATGCTTCTAATAGTCATCTCGCCCTTAAAGCCCCTTGAGCCCGTAAAAAT
TTACACATCCGATTTAACTGAAGAGCGCATGAAAGCAGTCCGGTCAGAAG
CTGATGACATCATGGCAGCATTCAACCGTGAGCCTTCTGGTGGGATAAGC
TATAAGGAATTTGCTCGGATTGTGACATCTTCGTTTCCGTATCTTTTCGA
TCCTCTGACACCGCTGTTCGAACATCTCCTCTTCAGCAGAAATCTGAACC
TATCCCAAAAACGCAACAGGGCTGATTCTACGGCATCGGAGCCTGTCGAA
GAAGAAGCCCCAGAAGATGATCTACCTTCACCTCCAACGATTACGCTTTC
GGGTAGCTTTGAATCAGTGATACTTAACTCGAGCGTCATATCGCATCTGT
CCTTCTTCCTTCCGTCATCCTCGGAAAGCCTAAACTTCCTCCGCGGCAAT
GTGCGCCTGCATCCAGTCTTCTCAACAGTCGCGCATGGCTCCTCTTTGAC
CTCCTTCTCGCACCACGTGCTCACCTGGTCCTCAGGCACTCTACTCGTGC
TCGAGGGAACTGACCCAACCGGCGAAATGTTAACCATCGGCGCCTACCTA
CCACAACCATGGAAATCACCAAATTCCACCCAGTCCAGCTCCAAATTCTC
CAATTCCGTTCTCCCATGTCTCTTCCAGCTCTCACCGAAACACCTACTCC
TTCAAGGGAACCCCTCCTCAACCATCCAACAACAATCAAACATCCCGGCC
GCATACTTCTCCACCAGCTCGGGAATCTCAATAGGTTGCCAGATTCCCCC
TTCATCGCGCAGCAATCAAAAGCCCCCCACTCCGCACGGCGCAGGCAGCT
TGACCATCGACGTTAGCCTCGAGACTGCCCAATTCCACGTCTCCCCCGTC
GTCCGCAACGGCGTCTTCCTGCCCCCACCCCCAGGCTCTACTCCAGACAC
TACCGTCAAAACCACCATCGAGATTTATAACTTAGAAGTATGGGGTCTCG
TTCCCGACCCTACAACCACGTCCGCAGAGGGCGGCAAAAGTGCCGTTGAA
CTTCAACAGGCGAAATGGGACTTTGAAGCTCAGGAGGCTGAACGGAGACG
CAGTGTGAATCTGAAGACTGGAGGCAGTGCCGCGGAGGAAAGCGCCAGAT
GGTTATTGGAAACCGCCGGGTTGATCGGGGATGGTGCAGGGCGACGTGCC
GGCGGGAGTGTCTGATTATAGAAACGGATAAAAAAAATTGGGTCTGAGAA
TATGATAGTATTGTTTCCTAATGAGACTCTGTTGTTGTGCGTTACACTTC
TAATTCATTGATATGTGTAGTCGTTTCAAATATCCCAAATGTAGCGATAC
TGTATGCGAGGTATGAGGATGAGACAGTATCTATTAAAGAAACATGTTCT
GACGAGTTCCTGCTCTTGAAACCTATACTTCTAAAGTATCATTTTGGCTC
GTGACACTTTGTAGCTGATTCAATTCCATTCTATACCCTCATTTTTACAC
CCGCCTGCGTACTTCCCCTACATCTATCCAAATCTGATTTCAAACCAGAT
CAGTCATCTCGTTACTTCCCACCTTTCCCCCCATCTCCCATCCCAGCATC
ATGATGGAAACCCCTCACACAAAACTCGCAACCCAAACATCCAT back to topCoding sequence (CDS) from alignment at ch6:2378415..2381208+ >KJC3_008556-T1 ID=KJC3_008556-T1|Name=KJC3_008556-T1|organism=Aspergillus niger KJC3|type=CDS|length=3804bp|location=Sequence derived from alignment at ch6:2378415..2381208+ (Aspergillus niger KJC3)
ATGGGACTGAGCCAGTCGACTGAGTATGGGGGCCAGACGTCCTCTTCAGA
GGAGCTGAGCTACGTGCTTGCTGAACGGTTTGCAACTAAATGCTTCACTC
CCTTGGAGTTGACTCATCTCAAAGACAACTTCTTTTCGCGTGCCATTGAC
CAAGGCGGCTTGAAGTACTGGAATGAGAAGACACTCTCGGATTTTCTAGG
GATTCCGGATAGCAGTGAATCCCACTGTCCTCTGGATGCGGGCCCGGTGA
TCTTCCGTATGGTCTCGTACCTTGGGGCATTTCCCTTCCAGAACACGCTA
GCTCCGAGTGTTCTAACGTTCGAAGCTATGGTGAAAGTCGTTGTTTTGCT
GACTGAGCGATACGGGAAAGTCCTAAGACGAGCGCGCAGGGATAGGATAC
GGCTTCTTTTCGGAAGCCTTGCTGATGTTGGAAGGAAGAGTGTTGAACAG
CACACTAATGGCGATGAAGTGAGCGAGGATGCTGATGCACCTGCGCCGAA
CTCTCATGTCCCAGGCTTTGCCATCGATGAGCCGGCCAACGATGATTATG
AGGACGAGGAGGACGATGATCTAGCATTAGCTGCTTTGGAATCCTTGGAT
GCCATTGAGGTCTTCAAGCACGATTCACGTATGGACAGGGCTGTCTACGA
AGCTCGGATATCTGCCGATACGCTCCGTCGACTCTTGATGCTTCTAATAG
TCATCTCGCCCTTAAAGCCCCTTGAGCCCGTAAAAATTTACACATCCGAT
TTAACTGAAGAGCGCATGAAAGCAGTCCGGTCAGAAGCTGATGACATCAT
GGCAGCATTCAACCGTGAGCCTTCTGGTGGGATAAGCTATAAGGAATTTG
CTCGGATTGTGACATCTTCGTTTCCGTATCTTTTCGATCCTCTGACACCG
CTGTTCGAACATCTCCTCTTCAGCAGAAATCTGAACCTATCCCAAAAACG
CAACAGGGCTGATTCTACGGCATCGGAGCCTGTCGAAGAAGAAGCCCCAG
AAGATGATCTACCTTCACCTCCAACGATTACGCTTTCGGGTAGCTTTGAA
TCAGTGATACTTAACTCGAGCGTCATATCGCATCTGTCCTTCTTCCTTCC
GTCATCCTCGGAAAGCCTAAACTTCCTCCGCGGCAATGTGCGCCTGCATC
CAGTCTTCTCAACAGTCGCGCATGGCTCCTCTTTGACCTCCTTCTCGCAC
CACGTGCTCACCTGGTCCTCAGGCACTCTACTCGTGCTCGAGGGAACTGA
CCCAACCGGCGAAATGTTAACCATCGGCGCCTACCTACCACAACCATGGA
AATCACCAAATTCCACCCAGTCCAGCTCCAAATTCTCCAATTCCGTTCTC
CCATGTCTCTTCCAGCTCTCACCGAAACACCTACTCCTTCAAGGGAACCC
CTCCTCAACCATCCAACAACAATCAAACATCCCGGCCGCATACTTCTCCA
CCAGCTCGGGAATCTCAATAGGTTGCCAGATTCCCCCTTCATCGCGCAGC
AATCAAAAGCCCCCCACTCCGCACGGCGCAGGCAGCTTGACCATCGACGT
TAGCCTCGAGACTGCCCAATTCCACGTCTCCCCCGTCGTCCGCAACGGCG
TCTTCCTGCCCCCACCCCCAGGCTCTACTCCAGACACTACCGTCAAAACC
ACCATCGAGATTTATAACTTAGAAGTATGGGGTCTCGTTCCCGACCCTAC
AACCACGTCCGCAGAGGGCGGCAAAAGTGCCGTTGAACTTCAACAGGCGA
AATGGGACTTTGAAGCTCAGGAGGCTGAACGGAGACGCAGTGTGAATCTG
AAGACTGGAGGCAGTGCCGCGGAGGAAAGCGCCAGATGGTTATTGGAAAC
CGCCGGGTTGATCGGGGATGGTGCAGGGCGACGTGCCGGCGGGAGTGTCT
GAATGGGACTGAGCCAGTCGACTGAGTATGGGGGCCAGACGTCCTCTTCA
GAGGAGCTGAGCTACGTGCTTGCTGAACGGTTTGCAACTAAATGCTTCAC
TCCCTTGGAGTTGACTCATCTCAAAGACAACTTCTTTTCGCGTGCCATTG
ACCAAGGCGGCTTGAAGTACTGGAATGAGAAGACACTCTCGGATTTTCTA
GGGATTCCGGATAGCAGTGAATCCCACTGTCCTCTGGATGCGGGCCCGGT
GATCTTCCGTATGGTCTCGTACCTTGGGGCATTTCCCTTCCAGAACACGC
TAGCTCCGAGTGTTCTAACGTTCGAAGCTATGGTGAAAGTCGTTGTTTTG
CTGACTGAGCGATACGGGAAAGTCCTAAGACGAGCGCGCAGGGATAGGAT
ACGGCTTCTTTTCGGAAGCCTTGCTGATGTTGGAAGGAAGAGTGTTGAAC
AGCACACTAATGGCGATGAAGTGAGCGAGGATGCTGATGCACCTGCGCCG
AACTCTCATGTCCCAGGCTTTGCCATCGATGAGCCGGCCAACGATGATTA
TGAGGACGAGGAGGACGATGATCTAGCATTAGCTGCTTTGGAATCCTTGG
ATGCCATTGAGGTCTTCAAGCACGATTCACGTATGGACAGGGCTGTCTAC
GAAGCTCGGATATCTGCCGATACGCTCCGTCGACTCTTGATGCTTCTAAT
AGTCATCTCGCCCTTAAAGCCCCTTGAGCCCGTAAAAATTTACACATCCG
ATTTAACTGAAGAGCGCATGAAAGCAGTCCGGTCAGAAGCTGATGACATC
ATGGCAGCATTCAACCGTGAGCCTTCTGGTGGGATAAGCTATAAGGAATT
TGCTCGGATTGTGACATCTTCGTTTCCGTATCTTTTCGATCCTCTGACAC
CGCTGTTCGAACATCTCCTCTTCAGCAGAAATCTGAACCTATCCCAAAAA
CGCAACAGGGCTGATTCTACGGCATCGGAGCCTGTCGAAGAAGAAGCCCC
AGAAGATGATCTACCTTCACCTCCAACGATTACGCTTTCGGGTAGCTTTG
AATCAGTGATACTTAACTCGAGCGTCATATCGCATCTGTCCTTCTTCCTT
CCGTCATCCTCGGAAAGCCTAAACTTCCTCCGCGGCAATGTGCGCCTGCA
TCCAGTCTTCTCAACAGTCGCGCATGGCTCCTCTTTGACCTCCTTCTCGC
ACCACGTGCTCACCTGGTCCTCAGGCACTCTACTCGTGCTCGAGGGAACT
GACCCAACCGGCGAAATGTTAACCATCGGCGCCTACCTACCACAACCATG
GAAATCACCAAATTCCACCCAGTCCAGCTCCAAATTCTCCAATTCCGTTC
TCCCATGTCTCTTCCAGCTCTCACCGAAACACCTACTCCTTCAAGGGAAC
CCCTCCTCAACCATCCAACAACAATCAAACATCCCGGCCGCATACTTCTC
CACCAGCTCGGGAATCTCAATAGGTTGCCAGATTCCCCCTTCATCGCGCA
GCAATCAAAAGCCCCCCACTCCGCACGGCGCAGGCAGCTTGACCATCGAC
GTTAGCCTCGAGACTGCCCAATTCCACGTCTCCCCCGTCGTCCGCAACGG
CGTCTTCCTGCCCCCACCCCCAGGCTCTACTCCAGACACTACCGTCAAAA
CCACCATCGAGATTTATAACTTAGAAGTATGGGGTCTCGTTCCCGACCCT
ACAACCACGTCCGCAGAGGGCGGCAAAAGTGCCGTTGAACTTCAACAGGC
GAAATGGGACTTTGAAGCTCAGGAGGCTGAACGGAGACGCAGTGTGAATC
TGAAGACTGGAGGCAGTGCCGCGGAGGAAAGCGCCAGATGGTTATTGGAA
ACCGCCGGGTTGATCGGGGATGGTGCAGGGCGACGTGCCGGCGGGAGTGT
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008556-T1.utr3p1 | KJC3_008556-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006571 |
| DBxref | PFAM:PF07534 |
| Product | Restriction of telomere capping protein 5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2378415..2381208 + |
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