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KJC3_008557-T1, KJC3_008557-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008557-T1
Unique NameKJC3_008557-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2380887..2382406-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008557-T1 ID=KJC3_008557-T1|Name=KJC3_008557-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1520bp|location=Sequence derived from alignment at ch6:2380887..2382406- (Aspergillus niger KJC3)
TGACTCATTTCCAGGCAGCACCAATCAGTACGATAAGGACATGTCTGATT
TCAAAGATCAAGCCGGCTTTATGAGTCAAGCAATATAAAATGTGGGGATG
ATTGTGTGTCAGCTTACTCCCATGCTAATCCTCGGATAAGATGTCACCAT
CCGCAGCTCCCCAGTAGCTAACTCGTATCATATGATAAAGACTATAATAG
TCTCAAATCCCATCGCCTAGCTACGCCCAACTCCACCAAGCCACCAGCAC
ACTGATTGAGCAAATTGAAAACAACAACATGTCCACCCAACTCGCCGCCT
CCGCCGCCTCTATCGCGCGCATCTCCCTCCACGATCCCAACAACTTCAAC
ATCCAACACTCGCAAACCCTCCACCGCCTAACCCTGCTTCAACACTGGAC
CATCCCCACCGGCTCCAAAGTCCTAGAATTAGGATGCGGCCAAGGTGACT
GCACAACCGTCCTCGCCTCCGCCGTAGGCGATCAGGGGAGCGTAGTAGCA
GTCGACCCAGCAGATCTTGACTACGGTGAGCCTATCCCCTCCTCCTCCTC
ACTCTACCCTACAAACTAACATCTATCTCTTATCTCCCAGGATCCCCTTA
CACTCTCGCCCAGGCCCAATCCCACATTTCCCAATCCCCCCTGGGCAGCC
GCATCAGCTGGATCCAACAATCCCCACTAACCTACCTCACTTCCCTACCC
CCATCATCCAGTATGACATTCGACGCTACAATCCTCGTCCACAGCCTCTG
GTACTTCTCCGCCCCGTCCCTCATTCTCTCCACGTTCCGTGCCGTGAGGC
AGCACAGTAAACGGCTCCTTCTAGCCGAGTGGGCATTAGTAGCTACGCAC
CCGTCCGCGCAGCCTCACGTGCTAGCTGCGCTTGCGCAGGCGGCGCTGGA
ATGTCGGAAGCCCGGGGATAGTAGCGACTCGAATGTGCGGACGGTGTTGG
GGCCGAAGAGGCTAACGGAGTTGGCGGTGGAGGCGGGGTGGAAGGTGGAG
AGGGAGGAGTATGTGGAGGCTGGGGAGGGGTTGTTGGATGGGAGCTGGGA
GGTGGCGGCTTGTCTTGATGGGGAGTTTGAGGAGGAGGTGAGGAGGGTTG
TGGGGGATGAGAGGGAGAGGGCGGTGGTGTTGGCTGCGAGGGATGCGTGT
GAGACGAGTTTGAAGGGTGTGGAGGGGGGGAGGAAGGGGGTTAGGAGTAT
GGATGTTTGGGTTGCGAGTTTTGTGTGAGGGGTTTCCATCATGATGCTGG
GATGGGAGATGGGGGGAAAGGTGGGAAGTAACGAGATGACTGATCTGGTT
TGAAATCAGATTTGGATAGATGTAGGGGAAGTACGCAGGCGGGTGTAAAA
ATGAGGGTATAGAATGGAATTGAATCAGCTACAAAGTGTCACGAGCCAAA
ATGATACTTTAGAAGTATAGGTTTCAAGAGCAGGAACTCGTCAGAACATG
TTTCTTTAATAGATACTGTCTCATCCTCATACCTCGCATACAGTATCGCT
ACATTTGGGATATTTGAAAC
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Coding sequence (CDS) from alignment at ch6:2380887..2382406-

>KJC3_008557-T1 ID=KJC3_008557-T1|Name=KJC3_008557-T1|organism=Aspergillus niger KJC3|type=CDS|length=1770bp|location=Sequence derived from alignment at ch6:2380887..2382406- (Aspergillus niger KJC3)
GATCCCCTTACACTCTCGCCCAGGCCCAATCCCACATTTCCCAATCCCCC
CTGGGCAGCCGCATCAGCTGGATCCAACAATCCCCACTAACCTACCTCAC
TTCCCTACCCCCATCATCCAGTATGACATTCGACGCTACAATCCTCGTCC
ACAGCCTCTGGTACTTCTCCGCCCCGTCCCTCATTCTCTCCACGTTCCGT
GCCGTGAGGCAGCACAGTAAACGGCTCCTTCTAGCCGAGTGGGCATTAGT
AGCTACGCACCCGTCCGCGCAGCCTCACGTGCTAGCTGCGCTTGCGCAGG
CGGCGCTGGAATGTCGGAAGCCCGGGGATAGTAGCGACTCGAATGTGCGG
ACGGTGTTGGGGCCGAAGAGGCTAACGGAGTTGGCGGTGGAGGCGGGGTG
GAAGGTGGAGAGGGAGGAGTATGTGGAGGCTGGGGAGGGGTTGTTGGATG
GGAGCTGGGAGGTGGCGGCTTGTCTTGATGGGGAGTTTGAGGAGGAGGTG
AGGAGGGTTGTGGGGGATGAGAGGGAGAGGGCGGTGGTGTTGGCTGCGAG
GGATGCGTGTGAGACGAGTTTGAAGGGTGTGGAGGGGGGGAGGAAGGGGG
TTAGGAGTATGGATGTTTGGGTTGCGAGTTTTGTGTGAATGTCCACCCAA
CTCGCCGCCTCCGCCGCCTCTATCGCGCGCATCTCCCTCCACGATCCCAA
CAACTTCAACATCCAACACTCGCAAACCCTCCACCGCCTAACCCTGCTTC
AACACTGGACCATCCCCACCGGCTCCAAAGTCCTAGAATTAGGATGCGGC
CAAGGTGACTGCACAACCGTCCTCGCCTCCGCCGTAGGCGATCAGGGGAG
CGTAGTAGCAGTCGACCCAGCAGATCTTGACTACGGATCCCCTTACACTC
TCGCCCAGGCCCAATCCCACATTTCCCAATCCCCCCTGGGCAGCCGCATC
AGCTGGATCCAACAATCCCCACTAACCTACCTCACTTCCCTACCCCCATC
ATCCAGTATGACATTCGACGCTACAATCCTCGTCCACAGCCTCTGGTACT
TCTCCGCCCCGTCCCTCATTCTCTCCACGTTCCGTGCCGTGAGGCAGCAC
AGTAAACGGCTCCTTCTAGCCGAGTGGGCATTAGTAGCTACGCACCCGTC
CGCGCAGCCTCACGTGCTAGCTGCGCTTGCGCAGGCGGCGCTGGAATGTC
GGAAGCCCGGGGATAGTAGCGACTCGAATGTGCGGACGGTGTTGGGGCCG
AAGAGGCTAACGGAGTTGGCGGTGGAGGCGGGGTGGAAGGTGGAGAGGGA
GGAGTATGTGGAGGCTGGGGAGGGGTTGTTGGATGGGAGCTGGGAGGTGG
CGGCTTGTCTTGATGGGGAGTTTGAGGAGGAGGTGAGGAGGGTTGTGGGG
GATGAGAGGGAGAGGGCGGTGGTGTTGGCTGCGAGGGATGCGTGTGAGAC
GAGTTTGAAGGGTGTGGAGGGGGGGAGGAAGGGGGTTAGGAGTATGGATG
TTTGGGTTGCGAGTTTTGTGTGAATGTCCACCCAACTCGCCGCCTCCGCC
GCCTCTATCGCGCGCATCTCCCTCCACGATCCCAACAACTTCAACATCCA
ACACTCGCAAACCCTCCACCGCCTAACCCTGCTTCAACACTGGACCATCC
CCACCGGCTCCAAAGTCCTAGAATTAGGATGCGGCCAAGGTGACTGCACA
ACCGTCCTCGCCTCCGCCGTAGGCGATCAGGGGAGCGTAGTAGCAGTCGA
CCCAGCAGATCTTGACTACG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008557KJC3_008557Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008557-T1KJC3_008557-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008557-T1.cdsKJC3_008557-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008557-T1.utr3p1KJC3_008557-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008557-T1.exon3KJC3_008557-T1.exon3Aspergillus niger KJC3exon
KJC3_008557-T1.exon2KJC3_008557-T1.exon2Aspergillus niger KJC3exon
KJC3_008557-T1.exon1KJC3_008557-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008557-T1.utr5p2KJC3_008557-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008557-T1.utr5p1KJC3_008557-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR041698
DBxrefPFAM:PF13649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2380887..2382406 -
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