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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2385555..2387815+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008559-T1 ID=KJC3_008559-T1|Name=KJC3_008559-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2261bp|location=Sequence derived from alignment at ch6:2385555..2387815+ (Aspergillus niger KJC3)
CTTAATCCTCCGCATCTTTTAGTTATTCACCGTTCCTGCCTCTAGCCAGG
TCGCATTGGTAGCATCCAGGTGTGAATAATCTGATTTATTCGCGTTTTCG
CTATGAAATATTGTTGAACAGTCGCAACCCCAGGTTTACTTATAGCAATT
GGTATACGGAGCATACGGCGGCTCTTCAAAGTAAGGGTTCCCGAGACATC
TCGACTTGCAGTTCGCTTTATTTCTACCTTCATAATGGCTAAACTATGTA
CTGCTTACTGTAGGCCCATAGCCGCCATGGTTGAGCTTCAACCCATCTTC
AAGAAGGCCTACTGGGCCCTGGCAGCCGGTGGGATCTTCTATGCGATATT
CGTCTGTGCCATGACGTACCCCGTAGTCCAAAGATTGTACGTTGGCTCAG
TTAAAAGCTCGGATCGATGTTTGAAACGAGGACAATGGTTAACATGCTGC
CTGCTCGTATCAGTGCCCTCTATGTGAATAAAATCAATCCCACTGCGTGG
CAGGATGTGAACCTGGTTGAATCATTCGGCTTTCTTAGTATGTTAGACTA
TCTCAGTCCACCAACCTAATCATGCTCGAAGGACAAGCTCATTAACTGCA
ACCAAAGAAACACAGGTGCAGCCATTCAAACTCGTAACTCCCGATAACGA
GACACTCTATGGATGGCATCTCCTGCCCCTGCAGCTCTGCCACGAGCATG
AAGAGGAGCTAAATGCAAACGAACCAGACGGACCAGCAGACGATTACACC
AAAACCACTGCATTCAAGCTACTCAAAAATGACCCGAATGCCAGGGTGGT
AGTTAGCTGTAAGTAAACTCGCCGCACATGAAGTATAGCGACACACGACA
CCATTTACTGAGATCCAACACCAGTCCACGGCAACGCCGCCCATCTCGCA
TCCGCCCAGCGACCAGACATCTATCGGCAAGTCCTGGGACTCTCAACCCC
CCAGAACCCCGTCCATGTCTTTGCCATTGACTACCGCGGATTCGGTCTCT
CAACTGGCTCTCCTACAGAAGAGGGCCTAATCACGGACGGAGTATCGCTG
CTCAACTACCTCACCTCCAACCCACTGAACATCTCACCATCACGCATCGT
AATCATGGGTCAGAGCCTAGGAACCGCCGTAAGCGCAGCAGTCGCAGAGC
GCTTCGCATTCGGGTCCCCAGACCCCACTGCTATCCAGCCAGCACTAAAG
AACCCGGAGCCCTTCGCTGGTGTTATCCTGCTTGCATCCTTCAGCAACGT
CCCAAGCTTGATCGATTCCTACAGTTTGAAAGGAATCACACCTCCGATGC
TCTCCTTGCTAGCTAACTACCCACGGGTACACAACTGGGCCAAGAGCCAC
ATCGTTGATCGCTGGGATACCGCCGGTAGAGTCGCACGTCTGTCCGGCGT
GAACACTACTATAGTCAAAGACGACCCTAACCCCGCTTACGCAAATAAAG
GTCTCGACCTCTTCATCATCCATGCAGCAAACGACGTCGAGATACCCTGG
CAGGAGGGCCGGCGCGTCTGGGTCGCCGCCACGGGCGAGGACATCCCCGG
TGCCCCTGGCAGGATAGTCCACGAACGGAAGGACTCTAACGGACCAAACG
AAGTGCAGATCTGGGAGAATCAATCGACGAAGGACAATGCAGTTGTTAAG
CGTGTTAGATGGGAACGCGTTAGCCATGGTGGTATGTCGATAGAACCCCT
ACCACATCCAACCCAGCAAGTAATACTTGACCAAAGAGGCTAACGATGAA
TTACAAGGCCACAACCGCGTCGCAACCTTCTCCGTCGCCGCTCTTTCAGT
GATGAGGGCCTTTGAGAAGTAAATGCCAGGCCACCACATCTTGTCAGCAA
CGTCACCTAGACTAGACTATTATTAGACACTACAGGCTAAATGCAAACTG
GGCCTTCCACATGGCTTGTAGCCTCAAATTCGGGTAGCCAATAGAAACCT
CGAAAAGAGCGAGATGTCAAAGGAATCGCGAAAATCCACTTATAAGGCAG
GCCAATCAAGAGGGAGTCTGGGGACGCGTCGACGCGGCTGAAGAGTCTGT
ATTCACTGTAAGTTGTTCTAGAGCTTGTGGTTGTGTTCTATAGAGGTACT
GTGTGAGTCGTTTGCATGTGAATGTGGGTTCCATGTTTTGTATGAATCGG
TATATTAGTGCTTGGTTTGGGGTTATATACCGCTATGATTGCCTGCGGTT
GAATGAAGGTCGCACATGAGTACTAGTACGAGCAGGGTATGGAGGATCCA
ATTCCAGTGGT back to topCoding sequence (CDS) from alignment at ch6:2385555..2387815+ >KJC3_008559-T1 ID=KJC3_008559-T1|Name=KJC3_008559-T1|organism=Aspergillus niger KJC3|type=CDS|length=6285bp|location=Sequence derived from alignment at ch6:2385555..2387815+ (Aspergillus niger KJC3)
ATGGTTGAGCTTCAACCCATCTTCAAGAAGGCCTACTGGGCCCTGGCAGC
CGGTGGGATCTTCTATGCGATATTCGTCTGTGCCATGACGTACCCCGTAG
TCCAAAGATTTGCCCTCTATGTGAATAAAATCAATCCCACTGCGTGGCAG
GATGTGAACCTGGTTGAATCATTCGGCTTTCTTAAAACACAGGTGCAGCC
ATTCAAACTCGTAACTCCCGATAACGAGACACTCTATGGATGGCATCTCC
TGCCCCTGCAGCTCTGCCACGAGCATGAAGAGGAGCTAAATGCAAACGAA
CCAGACGGACCAGCAGACGATTACACCAAAACCACTGCATTCAAGCTACT
CAAAAATGACCCGAATGCCAGGGTGGTAGTTAGCTTCCACGGCAACGCCG
CCCATCTCGCATCCGCCCAGCGACCAGACATCTATCGGCAAGTCCTGGGA
CTCTCAACCCCCCAGAACCCCGTCCATGTCTTTGCCATTGACTACCGCGG
ATTCGGTCTCTCAACTGGCTCTCCTACAGAAGAGGGCCTAATCACGGACG
GAGTATCGCTGCTCAACTACCTCACCTCCAACCCACTGAACATCTCACCA
TCACGCATCGTAATCATGGGTCAGAGCCTAGGAACCGCCGTAAGCGCAGC
AGTCGCAGAGCGCTTCGCATTCGGGTCCCCAGACCCCACTGCTATCCAGC
CAGCACTAAAGAACCCGGAGCCCTTCGCTGGTGTTATCCTGCTTGCATCC
TTCAGCAACGTCCCAAGCTTGATCGATTCCTACAGTTTGAAAGGAATCAC
ACCTCCGATGCTCTCCTTGCTAGCTAACTACCCACGGGTACACAACTGGG
CCAAGAGCCACATCGTTGATCGCTGGGATACCGCCGGTAGAGTCGCACGT
CTGTCCGGCGTGAACACTACTATAGTCAAAGACGACCCTAACCCCGCTTA
CGCAAATAAAGGTCTCGACCTCTTCATCATCCATGCAGCAAACGACGTCG
AGATACCCTGGCAGGAGGGCCGGCGCGTCTGGGTCGCCGCCACGGGCGAG
GACATCCCCGGTGCCCCTGGCAGGATAGTCCACGAACGGAAGGACTCTAA
CGGACCAAACGAAGTGCAGATCTGGGAGAATCAATCGACGAAGGACAATG
CAGTTGTTAAGCGTGTTAGATGGGAACGCGTTAGCCATGGTGGCCACAAC
CGCGTCGCAACCTTCTCCGTCGCCGCTCTTTCAGTGATGAGGGCCTTTGA
GAAGTAAATGGTTGAGCTTCAACCCATCTTCAAGAAGGCCTACTGGGCCC
TGGCAGCCGGTGGGATCTTCTATGCGATATTCGTCTGTGCCATGACGTAC
CCCGTAGTCCAAAGATTTGCCCTCTATGTGAATAAAATCAATCCCACTGC
GTGGCAGGATGTGAACCTGGTTGAATCATTCGGCTTTCTTAAAACACAGG
TGCAGCCATTCAAACTCGTAACTCCCGATAACGAGACACTCTATGGATGG
CATCTCCTGCCCCTGCAGCTCTGCCACGAGCATGAAGAGGAGCTAAATGC
AAACGAACCAGACGGACCAGCAGACGATTACACCAAAACCACTGCATTCA
AGCTACTCAAAAATGACCCGAATGCCAGGGTGGTAGTTAGCTTCCACGGC
AACGCCGCCCATCTCGCATCCGCCCAGCGACCAGACATCTATCGGCAAGT
CCTGGGACTCTCAACCCCCCAGAACCCCGTCCATGTCTTTGCCATTGACT
ACCGCGGATTCGGTCTCTCAACTGGCTCTCCTACAGAAGAGGGCCTAATC
ACGGACGGAGTATCGCTGCTCAACTACCTCACCTCCAACCCACTGAACAT
CTCACCATCACGCATCGTAATCATGGGTCAGAGCCTAGGAACCGCCGTAA
GCGCAGCAGTCGCAGAGCGCTTCGCATTCGGGTCCCCAGACCCCACTGCT
ATCCAGCCAGCACTAAAGAACCCGGAGCCCTTCGCTGGTGTTATCCTGCT
TGCATCCTTCAGCAACGTCCCAAGCTTGATCGATTCCTACAGTTTGAAAG
GAATCACACCTCCGATGCTCTCCTTGCTAGCTAACTACCCACGGGTACAC
AACTGGGCCAAGAGCCACATCGTTGATCGCTGGGATACCGCCGGTAGAGT
CGCACGTCTGTCCGGCGTGAACACTACTATAGTCAAAGACGACCCTAACC
CCGCTTACGCAAATAAAGGTCTCGACCTCTTCATCATCCATGCAGCAAAC
GACGTCGAGATACCCTGGCAGGAGGGCCGGCGCGTCTGGGTCGCCGCCAC
GGGCGAGGACATCCCCGGTGCCCCTGGCAGGATAGTCCACGAACGGAAGG
ACTCTAACGGACCAAACGAAGTGCAGATCTGGGAGAATCAATCGACGAAG
GACAATGCAGTTGTTAAGCGTGTTAGATGGGAACGCGTTAGCCATGGTGG
CCACAACCGCGTCGCAACCTTCTCCGTCGCCGCTCTTTCAGTGATGAGGG
CCTTTGAGAAGTAAATGGTTGAGCTTCAACCCATCTTCAAGAAGGCCTAC
TGGGCCCTGGCAGCCGGTGGGATCTTCTATGCGATATTCGTCTGTGCCAT
GACGTACCCCGTAGTCCAAAGATTTGCCCTCTATGTGAATAAAATCAATC
CCACTGCGTGGCAGGATGTGAACCTGGTTGAATCATTCGGCTTTCTTAAA
ACACAGGTGCAGCCATTCAAACTCGTAACTCCCGATAACGAGACACTCTA
TGGATGGCATCTCCTGCCCCTGCAGCTCTGCCACGAGCATGAAGAGGAGC
TAAATGCAAACGAACCAGACGGACCAGCAGACGATTACACCAAAACCACT
GCATTCAAGCTACTCAAAAATGACCCGAATGCCAGGGTGGTAGTTAGCTT
CCACGGCAACGCCGCCCATCTCGCATCCGCCCAGCGACCAGACATCTATC
GGCAAGTCCTGGGACTCTCAACCCCCCAGAACCCCGTCCATGTCTTTGCC
ATTGACTACCGCGGATTCGGTCTCTCAACTGGCTCTCCTACAGAAGAGGG
CCTAATCACGGACGGAGTATCGCTGCTCAACTACCTCACCTCCAACCCAC
TGAACATCTCACCATCACGCATCGTAATCATGGGTCAGAGCCTAGGAACC
GCCGTAAGCGCAGCAGTCGCAGAGCGCTTCGCATTCGGGTCCCCAGACCC
CACTGCTATCCAGCCAGCACTAAAGAACCCGGAGCCCTTCGCTGGTGTTA
TCCTGCTTGCATCCTTCAGCAACGTCCCAAGCTTGATCGATTCCTACAGT
TTGAAAGGAATCACACCTCCGATGCTCTCCTTGCTAGCTAACTACCCACG
GGTACACAACTGGGCCAAGAGCCACATCGTTGATCGCTGGGATACCGCCG
GTAGAGTCGCACGTCTGTCCGGCGTGAACACTACTATAGTCAAAGACGAC
CCTAACCCCGCTTACGCAAATAAAGGTCTCGACCTCTTCATCATCCATGC
AGCAAACGACGTCGAGATACCCTGGCAGGAGGGCCGGCGCGTCTGGGTCG
CCGCCACGGGCGAGGACATCCCCGGTGCCCCTGGCAGGATAGTCCACGAA
CGGAAGGACTCTAACGGACCAAACGAAGTGCAGATCTGGGAGAATCAATC
GACGAAGGACAATGCAGTTGTTAAGCGTGTTAGATGGGAACGCGTTAGCC
ATGGTGGCCACAACCGCGTCGCAACCTTCTCCGTCGCCGCTCTTTCAGTG
ATGAGGGCCTTTGAGAAGTAAATGGTTGAGCTTCAACCCATCTTCAAGAA
GGCCTACTGGGCCCTGGCAGCCGGTGGGATCTTCTATGCGATATTCGTCT
GTGCCATGACGTACCCCGTAGTCCAAAGATTTGCCCTCTATGTGAATAAA
ATCAATCCCACTGCGTGGCAGGATGTGAACCTGGTTGAATCATTCGGCTT
TCTTAAAACACAGGTGCAGCCATTCAAACTCGTAACTCCCGATAACGAGA
CACTCTATGGATGGCATCTCCTGCCCCTGCAGCTCTGCCACGAGCATGAA
GAGGAGCTAAATGCAAACGAACCAGACGGACCAGCAGACGATTACACCAA
AACCACTGCATTCAAGCTACTCAAAAATGACCCGAATGCCAGGGTGGTAG
TTAGCTTCCACGGCAACGCCGCCCATCTCGCATCCGCCCAGCGACCAGAC
ATCTATCGGCAAGTCCTGGGACTCTCAACCCCCCAGAACCCCGTCCATGT
CTTTGCCATTGACTACCGCGGATTCGGTCTCTCAACTGGCTCTCCTACAG
AAGAGGGCCTAATCACGGACGGAGTATCGCTGCTCAACTACCTCACCTCC
AACCCACTGAACATCTCACCATCACGCATCGTAATCATGGGTCAGAGCCT
AGGAACCGCCGTAAGCGCAGCAGTCGCAGAGCGCTTCGCATTCGGGTCCC
CAGACCCCACTGCTATCCAGCCAGCACTAAAGAACCCGGAGCCCTTCGCT
GGTGTTATCCTGCTTGCATCCTTCAGCAACGTCCCAAGCTTGATCGATTC
CTACAGTTTGAAAGGAATCACACCTCCGATGCTCTCCTTGCTAGCTAACT
ACCCACGGGTACACAACTGGGCCAAGAGCCACATCGTTGATCGCTGGGAT
ACCGCCGGTAGAGTCGCACGTCTGTCCGGCGTGAACACTACTATAGTCAA
AGACGACCCTAACCCCGCTTACGCAAATAAAGGTCTCGACCTCTTCATCA
TCCATGCAGCAAACGACGTCGAGATACCCTGGCAGGAGGGCCGGCGCGTC
TGGGTCGCCGCCACGGGCGAGGACATCCCCGGTGCCCCTGGCAGGATAGT
CCACGAACGGAAGGACTCTAACGGACCAAACGAAGTGCAGATCTGGGAGA
ATCAATCGACGAAGGACAATGCAGTTGTTAAGCGTGTTAGATGGGAACGC
GTTAGCCATGGTGGCCACAACCGCGTCGCAACCTTCTCCGTCGCCGCTCT
TTCAGTGATGAGGGCCTTTGAGAAGTAAATGGTTGAGCTTCAACCCATCT
TCAAGAAGGCCTACTGGGCCCTGGCAGCCGGTGGGATCTTCTATGCGATA
TTCGTCTGTGCCATGACGTACCCCGTAGTCCAAAGATTTGCCCTCTATGT
GAATAAAATCAATCCCACTGCGTGGCAGGATGTGAACCTGGTTGAATCAT
TCGGCTTTCTTAAAACACAGGTGCAGCCATTCAAACTCGTAACTCCCGAT
AACGAGACACTCTATGGATGGCATCTCCTGCCCCTGCAGCTCTGCCACGA
GCATGAAGAGGAGCTAAATGCAAACGAACCAGACGGACCAGCAGACGATT
ACACCAAAACCACTGCATTCAAGCTACTCAAAAATGACCCGAATGCCAGG
GTGGTAGTTAGCTTCCACGGCAACGCCGCCCATCTCGCATCCGCCCAGCG
ACCAGACATCTATCGGCAAGTCCTGGGACTCTCAACCCCCCAGAACCCCG
TCCATGTCTTTGCCATTGACTACCGCGGATTCGGTCTCTCAACTGGCTCT
CCTACAGAAGAGGGCCTAATCACGGACGGAGTATCGCTGCTCAACTACCT
CACCTCCAACCCACTGAACATCTCACCATCACGCATCGTAATCATGGGTC
AGAGCCTAGGAACCGCCGTAAGCGCAGCAGTCGCAGAGCGCTTCGCATTC
GGGTCCCCAGACCCCACTGCTATCCAGCCAGCACTAAAGAACCCGGAGCC
CTTCGCTGGTGTTATCCTGCTTGCATCCTTCAGCAACGTCCCAAGCTTGA
TCGATTCCTACAGTTTGAAAGGAATCACACCTCCGATGCTCTCCTTGCTA
GCTAACTACCCACGGGTACACAACTGGGCCAAGAGCCACATCGTTGATCG
CTGGGATACCGCCGGTAGAGTCGCACGTCTGTCCGGCGTGAACACTACTA
TAGTCAAAGACGACCCTAACCCCGCTTACGCAAATAAAGGTCTCGACCTC
TTCATCATCCATGCAGCAAACGACGTCGAGATACCCTGGCAGGAGGGCCG
GCGCGTCTGGGTCGCCGCCACGGGCGAGGACATCCCCGGTGCCCCTGGCA
GGATAGTCCACGAACGGAAGGACTCTAACGGACCAAACGAAGTGCAGATC
TGGGAGAATCAATCGACGAAGGACAATGCAGTTGTTAAGCGTGTTAGATG
GGAACGCGTTAGCCATGGTGGCCACAACCGCGTCGCAACCTTCTCCGTCG
CCGCTCTTTCAGTGATGAGGGCCTTTGAGAAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008559-T1.utr3p1 | KJC3_008559-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0017243 |
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2385555..2387815 + |
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