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KJC3_008561-T1, KJC3_008561-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008561-T1
Unique NameKJC3_008561-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2391569..2392360+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008561-T1 ID=KJC3_008561-T1|Name=KJC3_008561-T1|organism=Aspergillus niger KJC3|type=mRNA|length=792bp|location=Sequence derived from alignment at ch6:2391569..2392360+ (Aspergillus niger KJC3)
GTGTACGGCATTAATACTTCTAAGCTACCCGTTTCGGCGACTAGAGGAGC
AAATTATATATTTCCCGTCTAGATGCGATCGTCTCTGGGACTTCTGGCTT
CTGTATCCCGCAGCCAGCCCTCGAAGCTCAGGAAGCCAACCATTAGCCTT
GATCATGTATGTAACCATCGCTAGTCGAGTTGTTCATGCGCTGATATGAT
CGGTAGTTCATCCAAAGGCAGCGAGTTATCTCTCTATGGCGTGAGATTGT
GCGAGCGCTCAATAGTCAGTTCCCATCTATACGATTTCTAACAATCATGT
ACCATGCTGATGAGGTTGCAGAAATACCCAGCTCGTCCACCAAGGATGAA
CTGCACAGATATGCTCGTGGGGAGTTTGAGCGCAATAGAAACATTACAGA
CTTGGTATGCCTTCCTTGGTATTCTAGTACAGTATCAGACTGATGAGTAC
GGACAGCAACACATACGATATCTTATCTCGGTAAGCATCCTGTTTGTTGT
TCTATGGACAAGCAGCCTAACTATACATAGACCGGAAAGTCCGAATTTGA
TATGATGAGGCGGTATATTGACGAGCAAGTTGCAGGCTAAGGAGGGAGAT
TTCGCCAGGACCAAGCACTAATTAAGATACAGACTGGGGTCCAAAACATG
AGCTCGAGGGTTAAGAGATGGAGAGTGATATTTTTTAACAAAAATCGAAT
GCGTATATGTACAATATCATAGATACCCAGACCAACGTGAGAATCAACTA
AGAAACTCAATACCACTTATTTTTGCCGACCTCACTGCCTCG
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Coding sequence (CDS) from alignment at ch6:2391569..2392360+

>KJC3_008561-T1 ID=KJC3_008561-T1|Name=KJC3_008561-T1|organism=Aspergillus niger KJC3|type=CDS|length=1545bp|location=Sequence derived from alignment at ch6:2391569..2392360+ (Aspergillus niger KJC3)
ATGCGATCGTCTCTGGGACTTCTGGCTTCTGTATCCCGCAGCCAGCCCTC
GAAGCTCAGGAAGCCAACCATTAGCCTTGATCATTTCATCCAAAGGCAGC
GAGTTATCTCTCTATGGCGTGAGATTGTGCGAGCGCTCAATAAAATACCC
AGCTCGTCCACCAAGGATGAACTGCACAGATATGCTCGTGGGGAGTTTGA
GCGCAATAGAAACATTACAGACTTGCAACACATACGATATCTTATCTCGA
CCGGAAAGTCCGAATTTGATATGATGAGGCGGTATATTGACGAGCAAGTT
GCAGGCTAAATGCGATCGTCTCTGGGACTTCTGGCTTCTGTATCCCGCAG
CCAGCCCTCGAAGCTCAGGAAGCCAACCATTAGCCTTGATCATTTCATCC
AAAGGCAGCGAGTTATCTCTCTATGGCGTGAGATTGTGCGAGCGCTCAAT
AAAATACCCAGCTCGTCCACCAAGGATGAACTGCACAGATATGCTCGTGG
GGAGTTTGAGCGCAATAGAAACATTACAGACTTGCAACACATACGATATC
TTATCTCGACCGGAAAGTCCGAATTTGATATGATGAGGCGGTATATTGAC
GAGCAAGTTGCAGGCTAAATGCGATCGTCTCTGGGACTTCTGGCTTCTGT
ATCCCGCAGCCAGCCCTCGAAGCTCAGGAAGCCAACCATTAGCCTTGATC
ATTTCATCCAAAGGCAGCGAGTTATCTCTCTATGGCGTGAGATTGTGCGA
GCGCTCAATAAAATACCCAGCTCGTCCACCAAGGATGAACTGCACAGATA
TGCTCGTGGGGAGTTTGAGCGCAATAGAAACATTACAGACTTGCAACACA
TACGATATCTTATCTCGACCGGAAAGTCCGAATTTGATATGATGAGGCGG
TATATTGACGAGCAAGTTGCAGGCTAAATGCGATCGTCTCTGGGACTTCT
GGCTTCTGTATCCCGCAGCCAGCCCTCGAAGCTCAGGAAGCCAACCATTA
GCCTTGATCATTTCATCCAAAGGCAGCGAGTTATCTCTCTATGGCGTGAG
ATTGTGCGAGCGCTCAATAAAATACCCAGCTCGTCCACCAAGGATGAACT
GCACAGATATGCTCGTGGGGAGTTTGAGCGCAATAGAAACATTACAGACT
TGCAACACATACGATATCTTATCTCGACCGGAAAGTCCGAATTTGATATG
ATGAGGCGGTATATTGACGAGCAAGTTGCAGGCTAAATGCGATCGTCTCT
GGGACTTCTGGCTTCTGTATCCCGCAGCCAGCCCTCGAAGCTCAGGAAGC
CAACCATTAGCCTTGATCATTTCATCCAAAGGCAGCGAGTTATCTCTCTA
TGGCGTGAGATTGTGCGAGCGCTCAATAAAATACCCAGCTCGTCCACCAA
GGATGAACTGCACAGATATGCTCGTGGGGAGTTTGAGCGCAATAGAAACA
TTACAGACTTGCAACACATACGATATCTTATCTCGACCGGAAAGTCCGAA
TTTGATATGATGAGGCGGTATATTGACGAGCAAGTTGCAGGCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008561KJC3_008561Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008561-T1KJC3_008561-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008561-T1.utr5p1KJC3_008561-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008561-T1.exon1KJC3_008561-T1.exon1Aspergillus niger KJC3exon
KJC3_008561-T1.exon2KJC3_008561-T1.exon2Aspergillus niger KJC3exon
KJC3_008561-T1.exon3KJC3_008561-T1.exon3Aspergillus niger KJC3exon
KJC3_008561-T1.exon4KJC3_008561-T1.exon4Aspergillus niger KJC3exon
KJC3_008561-T1.exon5KJC3_008561-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008561-T1.cdsKJC3_008561-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008561-T1.utr3p1KJC3_008561-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008011
DBxrefPFAM:PF13233
DBxrefPFAM:PF05347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2391569..2392360 +
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