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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2393925..2396289+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008563-T1 ID=KJC3_008563-T1|Name=KJC3_008563-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2365bp|location=Sequence derived from alignment at ch6:2393925..2396289+ (Aspergillus niger KJC3)
GGGAAAATAATGCGAGAATGCCACCTCGATAATAGTTTTGTGAGCCTGCA
ATGCCCAGATTTAGTCTTGGGTCCTTTGCATGTCATTTTCTTCTTCCTCA
ACGTAAACCATTTCTCAGTTATTCCCGTCCTGCAGCTTAGGGCTGGAATT
GAGGGTTGATGACATAAAACTTTTCCGCTCCGATCACGGAATTCCCCACG
GAATACGCTGATTGACTCGGATCTAGTGCCACCGCCGGACTTTTCGTTTG
GTTGACTCAGAGGATTTCCGCCGGACTCTGGACTTTGTCTTTGTTCTTAT
CACATTCAATTCTCTCACATATACCCACAAAGACGCCATAATGCCGGGCG
AAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAAGTTGGACAAC
CTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTTCGGACAAGGT
GGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCTGACGCCTTCC
TGCTTCCCAATGGAACGCCTGACGTGAGTCTATACTGTATCTTTACGCCC
TCTATCCAATTACTGATGTGATGCTTCTTTATAGTATCTCCGGTTGATCC
TGACGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCG
GTCAACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGA
TCTTCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGG
CGCACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCA
GGTGGGTGGCGTCGGTGTGAAGTAGTCACGGTAACACTAGTCGACTGACA
TAAACAAAAAGGAAACCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAAC
TGAAGATCCCCGCCACTATCGTTATGCCATCGGGCACCCCCGCTATCAAG
CATCTGAATGTCGCCCGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGA
CTTCGACGCAGCTAAGCAAGAAGCATACCGGTTGCAGGAGCAACACGGAC
TTACCATGATCCCTCCCTTCGATGACCCCTACGTGATCGCTGGCCAAGGA
ACCATTGGCATGGAGATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGC
TGTCTTCTGTGCCGTCGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCT
ACCTTAAGCGCATCGCACCACACGTGAAGATCATTGGCGTTGAGGCCCGC
GATGCCAATGCCATGGCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCT
GAAGGATGTGGGCCTGTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAG
AGGAGAACTATCGACTTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTC
ACAACCGATGAGACATGCGCCGCCATCAAGGATGCGTTTGAGGACACACG
GTCTATCATTGAACCAGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGT
ACGCCGTAATGAACCCCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATC
GCCTCCGGAGCTAACATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCG
TGCGGCTCTGGGAGAGCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCG
AGAAGCCAGGCGCTTTCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCA
GTCACGGCGTTCAGCTACCGTTACGCCCGTGAATCGTCTGCCGATGTTCT
GATGGGCATCTCTTTGTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGA
TTATCAGCCAATTGGTACGAGGTGGCATGGATACGAAGGATCTTAGTGAT
GACGAGCTGGCGAAGAGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGA
GGTCGCGGATGAACGGTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTG
CTCTTGCTAAGTTCTTGACGACCCTTCGTCCCAACCAGAATATCTCCCTG
TTCCACTACCGTAACTATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTAT
CCAGTGCCCTGAGAACGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATC
TGGCTTATCCCTTCACTGAACATACCGATTCCCCGACCTACAAGACCTTC
CTGAGGTAGAGGAATGACCGACTGTCTTTGCTTTTTCTTTATCAAATTAG
ATTTCTAGAAAACACAGTGTGGGCCATTGATGGATTTTGCTTGAAATGTT
TAGGCGTTCTGTTGGGCATGGGGAAGATAGAATTGTGTACCTAAGTTTGG
GGTTTCCTTCGTATATACTCTAATGAAGCATGATACTGACACCATAAATG
ATTGATATTAGCTAT back to topCoding sequence (CDS) from alignment at ch6:2393925..2396289+ >KJC3_008563-T1 ID=KJC3_008563-T1|Name=KJC3_008563-T1|organism=Aspergillus niger KJC3|type=CDS|length=5094bp|location=Sequence derived from alignment at ch6:2393925..2396289+ (Aspergillus niger KJC3)
ATGCCGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAA
GTTGGACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTT
CGGACAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCT
GACGCCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCT
GACGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGG
TCAACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGAT
CTTCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGC
GCACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAG
GAAACCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCC
GCCACTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGT
CGCCCGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAG
CTAAGCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATC
CCTCCCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCAT
GGAGATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTG
CCGTCGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGC
ATCGCACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGC
CATGGCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGG
GCCTGTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTAT
CGACTTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGA
GACATGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTG
AACCAGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATG
AACCCCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGC
TAACATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGG
GAGAGCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGC
GCTTTCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTT
CAGCTACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCT
CTTTGTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAA
TTGGTACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGC
GAAGAGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATG
AACGGTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAG
TTCTTGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCG
TAACTATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTG
AGAACGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCC
TTCACTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAGAT
GCCGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAAGT
TGGACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTTCG
GACAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCTGA
CGCCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCTGA
CGTCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGGTC
AACATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGATCT
TCTCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGCGC
ACTTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAGGA
AACCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCCGC
CACTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGTCG
CCCGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAGCT
AAGCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATCCC
TCCCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCATGG
AGATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTGCC
GTCGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGCAT
CGCACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGCCA
TGGCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGGGC
CTGTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTATCG
ACTTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGAGA
CATGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTGAA
CCAGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATGAA
CCCCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGCTA
ACATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGGGA
GAGCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGCGC
TTTCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTTCA
GCTACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCTCT
TTGTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAATT
GGTACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGCGA
AGAGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATGAA
CGGTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAGTT
CTTGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCGTA
ACTATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTGAG
AACGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCCTT
CACTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAGATGC
CGGGCGAAGCAACTGAGAACGGCGTTCCGTACCCCGTTTCAACCAAGTTG
GACAACCTGACCCTGAACGAGCGTTCGGCTGCTCCGTCTCCCACTTCGGA
CAAGGTGGATGGTCAAGAGCGATCAACAGTCGATTATGGCATTCCTGACG
CCTTCCTGCTTCCCAATGGAACGCCTGACTATCTCCGGTTGATCCTGACG
TCCCGTGTCTACGACATTATCGAGGAAACCCCGCTTCACCATGCGGTCAA
CATCAGCAATCGCCTGGAGTGCCGTGTGCTCCTGAAGAGAGAGGATCTTC
TCCCCGTGTTCAGTTTCAAGCTCCGTGGAGCCTACAACAAAATGGCGCAC
TTGACCCCCGAGCAACGGTGGAAGGGAGTCATTGCGTGCTCAGCAGGAAA
CCATGCGCAGGGCGTCGCTTACTCGGCTCGGAAACTGAAGATCCCCGCCA
CTATCGTTATGCCATCGGGCACCCCCGCTATCAAGCATCTGAATGTCGCC
CGCCTGGGTGGTAGCGTGGTCCTCCACGGGGACGACTTCGACGCAGCTAA
GCAAGAAGCATACCGGTTGCAGGAGCAACACGGACTTACCATGATCCCTC
CCTTCGATGACCCCTACGTGATCGCTGGCCAAGGAACCATTGGCATGGAG
ATATTGCGCCAGGCCAATTTGCAGAAGCTAGAAGCTGTCTTCTGTGCCGT
CGGTGGAGGAGGTCTGATTGCTGGCATTGGCGTCTACCTTAAGCGCATCG
CACCACACGTGAAGATCATTGGCGTTGAGGCCCGCGATGCCAATGCCATG
GCACAGTCCCTCGAATCGGGTTCTCGAGTGTTTCTGAAGGATGTGGGCCT
GTTCGCAGACGGTGCTGCTGTCAAGTCTGTTGGAGAGGAGAACTATCGAC
TTGCACGTGAAGTCATCGATGAGGTCGTTCAGGTCACAACCGATGAGACA
TGCGCCGCCATCAAGGATGCGTTTGAGGACACACGGTCTATCATTGAACC
AGCAGGTGCCCTGGCTCTGGCCGGTCTCAAGAAGTACGCCGTAATGAACC
CCAGCCCCGACACGAGCAGGGAGTTGTGCGCTATCGCCTCCGGAGCTAAC
ATGGACTTCGACCGCCTGCGCTTCGTTGCTGAGCGTGCGGCTCTGGGAGA
GCGGAAGGAGGCGCTCCTGAGCGTCAGGATCCCCGAGAAGCCAGGCGCTT
TCGCAAAGCTTGTCGAGGTTGTTCTTCCTCATGCAGTCACGGCGTTCAGC
TACCGTTACGCCCGTGAATCGTCTGCCGATGTTCTGATGGGCATCTCTTT
GTCCGCTGCTACTGGTCGGGACGATTTGGCCAAGATTATCAGCCAATTGG
TACGAGGTGGCATGGATACGAAGGATCTTAGTGATGACGAGCTGGCGAAG
AGACACTTGCGCTTCCTGGTTGGTGGTCGCAGTGAGGTCGCGGATGAACG
GTTGTTCATGTTCGAGTTCCCCGAACGTCCGGGTGCTCTTGCTAAGTTCT
TGACGACCCTTCGTCCCAACCAGAATATCTCCCTGTTCCACTACCGTAAC
TATGGTGGTGATGTTGGCAAGGTGCTTGCGGGTATCCAGTGCCCTGAGAA
CGAGAAGGCCGAGCTGGAGGCTTTCCTCAGCGATCTGGCTTATCCCTTCA
CTGAACATACCGATTCCCCGACCTACAAGACCTTCCTGAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006520 | cellular amino acid metabolic process |
| GO:0009097 | isoleucine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0004794 | L-threonine ammonia-lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008563-T1.utr5p1 | KJC3_008563-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008563-T1.utr3p1 | KJC3_008563-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261O4Y |
| DBxref | InterPro:IPR000634 |
| DBxref | InterPro:IPR001926 |
| DBxref | InterPro:IPR001721 |
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR038110 |
| DBxref | InterPro:IPR005787 |
| DBxref | PFAM:PF00585 |
| DBxref | PFAM:PF00291 |
| Product | threonine deaminase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2393925..2396289 + |
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